Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

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The map label for this gene is cirA [C]

Identifier: 21241764

GI number: 21241764

Start: 1150751

End: 1152874

Strand: Reverse

Name: cirA [C]

Synonym: XAC0999

Alternate gene names: 21241764

Gene position: 1152874-1150751 (Counterclockwise)

Preceding gene: 21241767

Following gene: 21241715

Centisome position: 22.28

GC content: 63.7

Gene sequence:

>2124_bases
ATGACTCCTCGCCTTCTGTCTGCCGCCATCACCGTCGCCTTGCTGGCCGCCCCCATCGGTGCGGCGTCTGCCGCCGATGC
CGACTCCGAGCGCACGACCGACCTGGATACGGTCAATGTGATCGCCAAGCTCGAGGCGGCACGCAATGCCCTGTCGCCGG
ACATCGGCAGCAGCCAATTTGCCATCACCGCTGACGATATCGATCGCCTGCCGCTCGGCGCGGCGACGCCACTCAATCAG
GTCCTGCTGCAGGCGCCGGGCGTGGTACAGGATTCCTACGGCGGCATCCACGTGCGCGGCGACCACGCCAACCTGCAGTA
CCGCATCAACGGCGTGATCATTCCCGAATCCATCTCTGGCTTCGGCCAGAGCCTGGAGCCGCGCATCATCAAGAACCTCA
AGCTGCTCGATGGCGCATTGCCGGCACAGTTCGGCGACCGCACCGCTGCGGTGGTCGACATCACCACCAAGAATGGGGCC
GAGCTCGGCAATGGCGGCAGCGTCGGCATCACCGCGGGCTCCTACGGCACCATCAACCCCAACGCCTCGCTGTGGGGCAG
CAGCGGGCGTTTGAGCTGGTTCGTCAGCGGCGATTACGACCAGAACAAGAATGGCCTGGAAAACCCGGTCGACAGCCTCA
ACCCCCTCCATGACAAAACCCATCAGGGCAAGGGCTTCGCCGATCTGACCTACCTGGTCAACGAGGACACCCGTCTCAGC
CTGCTGGTCGGCTACGCGAACAACCGCTTCCAGATCCCCAACAATCCGGGGCAGACGCCGGCCTTCGATTACCTGGGCAC
CACCGATTTCGACTCCTCGCGCCTGGACGAGAACCAGCGCGAAAACACCCGTTTCGGCACCCTGGCCCTGCAAGGCACGC
TCGGCGACACCAACTATCAGCTCTCCGCCGGCCAGCGTTACAGCAGCGTCGCCTTCTCCCCCGACGTTGCCGGCGACCTG
ATCTTCAACGGCATCGCCTCGCAAGTGGACCGCAGCAACCGCGCCAATACCGTGCAGGCGGACTTCGCAACGCCCTGGGG
CGGATCGCACACGCTGCGCTACGGCGTGTACGGCAATTTCGAACACGCCATCGCCAGCAACAATTCGTATGTCTTCCCTG
CCAACGACGACGGCAGCCAGAGCAGCAACGTGCCGCTGTTCATTCTCGACGGCAGCCGCTTCCATGCCAGCACCTACGCG
CTCTACCTGCAGGACGAGTGGAAGATCGGCGAGGACTGGACCGTCAATTACGGCCTGCGCGGCGACAAGTACAAGGCCTT
CGGCACGACCGAAGGTCAGCTCAGTCCGCGCCTGGGCGTCATCTGGCGCGCCAGCGACAGCACCACCCTGCACGCCGGAT
ACGCGCGTTACTTCACCCCACCGGCCAGCGAGCTGATCTCCACCAGCGACATCGCGCTCTACGACGGCACCACCAATCAG
CAGTCGGCCGGTGACGGCCCGACCACGCCACTGAGCGAGCGTAGCGACTACTACGACCTGGGTATCTCGCAGGTGGTCAC
CGATCATCTGACGCTTGGCCTGGACACCTATTACCGCGAGGCCGACCGGCTCCAGGACGAAGGCCAGTTCGGTGCCGCCT
ATGTCTATTCCACCTTCAATTACCGCTATGGCCGCATCCGCGGCGCCGAATTCAGCGCCGACTACACCAACGGGCCCGTG
ACGGCATATTTCAACCTCGCCTACAGCAAGGCCATGGGCAAGCGGGTCATGACCAGCCTGTACAACTTCGATCCGGATGC
GCTGGCCTATACCTACGACAACTGGATCCATCTGGATCACGACCAGAAGCTGACCTCGTCCGGCGGCGTCAACTACGCCT
TCAGCGAAGGCAGCAAGGTCGGCCTCAACTATCTGTTCGGCAGCGGCTTGCGCACCGATACCGACACGGTACCCAACGGC
GCTTCGCTTCCGTCGTACTTCCAGTTGAATGCCAGCGTCGGTCACGACTTCGACGTCAGCACGCATCCGCTGCATGTGCA
ACTGGCCGCGGTCAATGTCCTCAACCGCAGCTACCAGTTGCGCGATGGTGGCGGCATCGGCGTGTTCGCGCCGCAATGGG
CGCCGCGCCGCGGCGTCTATGTGAGCCTGCAGCAGGACTTCTGA

Upstream 100 bases:

>100_bases
CGCCCGTCGAGCCATGACTTTCGACCTACGCTAGCGCTCGCCAAAGCGCCCAACGTTACAAAATAACAACATCCTCCCTC
ACCCACCGCGCGAAACCGCC

Downstream 100 bases:

>100_bases
TTGCGGTGCGAGGCAGCGAATGACCGGAACAGGACCAGCCCATTCGTTGCCGAAAGGCTGCAGCACGGCTGGCCACGCTG
CGTACCGCCTGCATGGCGGG

Product: colicin I receptor

Products: NA

Alternate protein names: Nb-Dependent Outer Membrane Receptor Protein; NB Dependent Receptor; Hemin Receptor; NB-Dependent Outer Membrane Receptor; Outer Membrane Insertion C-Terminal Signal; Outer Membrane Receptor For Iron Transport; Outer Membrane Colicin I Receptor; Nb-Dependent Receptor; NB Potential Colicin Receptor; Cna Protein B-Type Domain Protein; Colicin I Receptor; NB-Dependent Siderophore Receptor; Ferrichrome-Iron Receptor

Number of amino acids: Translated: 707; Mature: 706

Protein sequence:

>707_residues
MTPRLLSAAITVALLAAPIGAASAADADSERTTDLDTVNVIAKLEAARNALSPDIGSSQFAITADDIDRLPLGAATPLNQ
VLLQAPGVVQDSYGGIHVRGDHANLQYRINGVIIPESISGFGQSLEPRIIKNLKLLDGALPAQFGDRTAAVVDITTKNGA
ELGNGGSVGITAGSYGTINPNASLWGSSGRLSWFVSGDYDQNKNGLENPVDSLNPLHDKTHQGKGFADLTYLVNEDTRLS
LLVGYANNRFQIPNNPGQTPAFDYLGTTDFDSSRLDENQRENTRFGTLALQGTLGDTNYQLSAGQRYSSVAFSPDVAGDL
IFNGIASQVDRSNRANTVQADFATPWGGSHTLRYGVYGNFEHAIASNNSYVFPANDDGSQSSNVPLFILDGSRFHASTYA
LYLQDEWKIGEDWTVNYGLRGDKYKAFGTTEGQLSPRLGVIWRASDSTTLHAGYARYFTPPASELISTSDIALYDGTTNQ
QSAGDGPTTPLSERSDYYDLGISQVVTDHLTLGLDTYYREADRLQDEGQFGAAYVYSTFNYRYGRIRGAEFSADYTNGPV
TAYFNLAYSKAMGKRVMTSLYNFDPDALAYTYDNWIHLDHDQKLTSSGGVNYAFSEGSKVGLNYLFGSGLRTDTDTVPNG
ASLPSYFQLNASVGHDFDVSTHPLHVQLAAVNVLNRSYQLRDGGGIGVFAPQWAPRRGVYVSLQQDF

Sequences:

>Translated_707_residues
MTPRLLSAAITVALLAAPIGAASAADADSERTTDLDTVNVIAKLEAARNALSPDIGSSQFAITADDIDRLPLGAATPLNQ
VLLQAPGVVQDSYGGIHVRGDHANLQYRINGVIIPESISGFGQSLEPRIIKNLKLLDGALPAQFGDRTAAVVDITTKNGA
ELGNGGSVGITAGSYGTINPNASLWGSSGRLSWFVSGDYDQNKNGLENPVDSLNPLHDKTHQGKGFADLTYLVNEDTRLS
LLVGYANNRFQIPNNPGQTPAFDYLGTTDFDSSRLDENQRENTRFGTLALQGTLGDTNYQLSAGQRYSSVAFSPDVAGDL
IFNGIASQVDRSNRANTVQADFATPWGGSHTLRYGVYGNFEHAIASNNSYVFPANDDGSQSSNVPLFILDGSRFHASTYA
LYLQDEWKIGEDWTVNYGLRGDKYKAFGTTEGQLSPRLGVIWRASDSTTLHAGYARYFTPPASELISTSDIALYDGTTNQ
QSAGDGPTTPLSERSDYYDLGISQVVTDHLTLGLDTYYREADRLQDEGQFGAAYVYSTFNYRYGRIRGAEFSADYTNGPV
TAYFNLAYSKAMGKRVMTSLYNFDPDALAYTYDNWIHLDHDQKLTSSGGVNYAFSEGSKVGLNYLFGSGLRTDTDTVPNG
ASLPSYFQLNASVGHDFDVSTHPLHVQLAAVNVLNRSYQLRDGGGIGVFAPQWAPRRGVYVSLQQDF
>Mature_706_residues
TPRLLSAAITVALLAAPIGAASAADADSERTTDLDTVNVIAKLEAARNALSPDIGSSQFAITADDIDRLPLGAATPLNQV
LLQAPGVVQDSYGGIHVRGDHANLQYRINGVIIPESISGFGQSLEPRIIKNLKLLDGALPAQFGDRTAAVVDITTKNGAE
LGNGGSVGITAGSYGTINPNASLWGSSGRLSWFVSGDYDQNKNGLENPVDSLNPLHDKTHQGKGFADLTYLVNEDTRLSL
LVGYANNRFQIPNNPGQTPAFDYLGTTDFDSSRLDENQRENTRFGTLALQGTLGDTNYQLSAGQRYSSVAFSPDVAGDLI
FNGIASQVDRSNRANTVQADFATPWGGSHTLRYGVYGNFEHAIASNNSYVFPANDDGSQSSNVPLFILDGSRFHASTYAL
YLQDEWKIGEDWTVNYGLRGDKYKAFGTTEGQLSPRLGVIWRASDSTTLHAGYARYFTPPASELISTSDIALYDGTTNQQ
SAGDGPTTPLSERSDYYDLGISQVVTDHLTLGLDTYYREADRLQDEGQFGAAYVYSTFNYRYGRIRGAEFSADYTNGPVT
AYFNLAYSKAMGKRVMTSLYNFDPDALAYTYDNWIHLDHDQKLTSSGGVNYAFSEGSKVGLNYLFGSGLRTDTDTVPNGA
SLPSYFQLNASVGHDFDVSTHPLHVQLAAVNVLNRSYQLRDGGGIGVFAPQWAPRRGVYVSLQQDF

Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76502; Mature: 76371

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPRLLSAAITVALLAAPIGAASAADADSERTTDLDTVNVIAKLEAARNALSPDIGSSQF
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEE
AITADDIDRLPLGAATPLNQVLLQAPGVVQDSYGGIHVRGDHANLQYRINGVIIPESISG
EEECCCCCCCCCCCCCCHHHHHHHCCCCEEECCCCEEEEECCCCEEEEEEEEEECCCCCC
FGQSLEPRIIKNLKLLDGALPAQFGDRTAAVVDITTKNGAELGNGGSVGITAGSYGTINP
CCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCEECC
NASLWGSSGRLSWFVSGDYDQNKNGLENPVDSLNPLHDKTHQGKGFADLTYLVNEDTRLS
CCCEECCCCCEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEEEEECCCCEEE
LLVGYANNRFQIPNNPGQTPAFDYLGTTDFDSSRLDENQRENTRFGTLALQGTLGDTNYQ
EEEEECCCEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCEEEEEEEEEECCCCCEE
LSAGQRYSSVAFSPDVAGDLIFNGIASQVDRSNRANTVQADFATPWGGSHTLRYGVYGNF
EECCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEECCCC
EHAIASNNSYVFPANDDGSQSSNVPLFILDGSRFHASTYALYLQDEWKIGEDWTVNYGLR
HHHEECCCCEEEECCCCCCCCCCCCEEEECCCEEEEEEEEEEEEECCCCCCCEEEEECCC
GDKYKAFGTTEGQLSPRLGVIWRASDSTTLHAGYARYFTPPASELISTSDIALYDGTTNQ
CCCEEEECCCCCCCCCCEEEEEECCCCCEEECCCCEECCCCHHHHCCCCCEEEECCCCCC
QSAGDGPTTPLSERSDYYDLGISQVVTDHLTLGLDTYYREADRLQDEGQFGAAYVYSTFN
CCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEEECC
YRYGRIRGAEFSADYTNGPVTAYFNLAYSKAMGKRVMTSLYNFDPDALAYTYDNWIHLDH
EEEEEEECCEECCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEECC
DQKLTSSGGVNYAFSEGSKVGLNYLFGSGLRTDTDTVPNGASLPSYFQLNASVGHDFDVS
CCEECCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC
THPLHVQLAAVNVLNRSYQLRDGGGIGVFAPQWAPRRGVYVSLQQDF
CCCEEEEEEEEEECCCCEEEECCCCEEEECCCCCCCCCEEEEEECCC
>Mature Secondary Structure 
TPRLLSAAITVALLAAPIGAASAADADSERTTDLDTVNVIAKLEAARNALSPDIGSSQF
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEE
AITADDIDRLPLGAATPLNQVLLQAPGVVQDSYGGIHVRGDHANLQYRINGVIIPESISG
EEECCCCCCCCCCCCCCHHHHHHHCCCCEEECCCCEEEEECCCCEEEEEEEEEECCCCCC
FGQSLEPRIIKNLKLLDGALPAQFGDRTAAVVDITTKNGAELGNGGSVGITAGSYGTINP
CCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCEECC
NASLWGSSGRLSWFVSGDYDQNKNGLENPVDSLNPLHDKTHQGKGFADLTYLVNEDTRLS
CCCEECCCCCEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEEEEECCCCEEE
LLVGYANNRFQIPNNPGQTPAFDYLGTTDFDSSRLDENQRENTRFGTLALQGTLGDTNYQ
EEEEECCCEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCEEEEEEEEEECCCCCEE
LSAGQRYSSVAFSPDVAGDLIFNGIASQVDRSNRANTVQADFATPWGGSHTLRYGVYGNF
EECCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEECCCC
EHAIASNNSYVFPANDDGSQSSNVPLFILDGSRFHASTYALYLQDEWKIGEDWTVNYGLR
HHHEECCCCEEEECCCCCCCCCCCCEEEECCCEEEEEEEEEEEEECCCCCCCEEEEECCC
GDKYKAFGTTEGQLSPRLGVIWRASDSTTLHAGYARYFTPPASELISTSDIALYDGTTNQ
CCCEEEECCCCCCCCCCEEEEEECCCCCEEECCCCEECCCCHHHHCCCCCEEEECCCCCC
QSAGDGPTTPLSERSDYYDLGISQVVTDHLTLGLDTYYREADRLQDEGQFGAAYVYSTFN
CCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEEECC
YRYGRIRGAEFSADYTNGPVTAYFNLAYSKAMGKRVMTSLYNFDPDALAYTYDNWIHLDH
EEEEEEECCEECCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEECC
DQKLTSSGGVNYAFSEGSKVGLNYLFGSGLRTDTDTVPNGASLPSYFQLNASVGHDFDVS
CCEECCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC
THPLHVQLAAVNVLNRSYQLRDGGGIGVFAPQWAPRRGVYVSLQQDF
CCCEEEEEEEEEECCCCEEEECCCCEEEECCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA