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The map label for this gene is ligA

Identifier: 21241649

GI number: 21241649

Start: 1040621

End: 1040980

Strand: Direct

Name: ligA

Synonym: XAC0879

Alternate gene names: NA

Gene position: 1040621-1040980 (Clockwise)

Preceding gene: 21241648

Following gene: 21241650

Centisome position: 20.11

GC content: 60.28

Gene sequence:

>360_bases
ATGAATCCGCAAACCCATGGCATGGAGCAGATCGGCGGCACGTACCTGTTCGATCTGCGCACCAGCAATCGCGCGCTGCG
CCTGAACCGCTTTTTCTGGCACATGATCCGCGCCCCGTGGCGCGATCGTTTCTTGCAGGATGCAGAAGTATTGATGCAGG
AAGCCGACCTCACCGAGCAGGAGAAGGCGCTGATCCGTGCGCGCGACTGGCTTGGCCTGGTGCAGTACGGCGCCAACTTC
TTCGTCATCGAAAAATTCGCGCGCGTGGTGCGCATGACCAATCTGCAGGTCTACGCAATCATGCGCGGCGAATCGTTCGA
AGACTTCATGCAGACGCGGCGTGTGCCCCATGCGCGCTGA

Upstream 100 bases:

>100_bases
ATGACCGTGGTGCTGTACGAGCCGGGCGAAGAAGCAGCCGGCGCGCCGCGTTCGGCCGAACTGCTTGCGCGCACTGCCGC
CGCGGCCTGAGGAGGTGCTG

Downstream 100 bases:

>100_bases
GCTATGCGTACTGGCTGTGCGCCGCATCGCCGCATCACCCGACTTCCCAACGTAAGGCCCACCCCCATGACCATGTCTTC
CGTGTTCTTTGAACATCGCA

Product: protocatechuate 4,5-dioxygenase subunit alpha

Products: NA

Alternate protein names: Protocatechuate 4 5-Dioxygenase Subunit Alpha; Extradiol Ring-Cleavage Dioxygenase LigAB LigA Subunit; Protocatechuate Degradation Protein; Extradiol Dioxygenase; Aromatic Ring-Opening Dioxygenase

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MNPQTHGMEQIGGTYLFDLRTSNRALRLNRFFWHMIRAPWRDRFLQDAEVLMQEADLTEQEKALIRARDWLGLVQYGANF
FVIEKFARVVRMTNLQVYAIMRGESFEDFMQTRRVPHAR

Sequences:

>Translated_119_residues
MNPQTHGMEQIGGTYLFDLRTSNRALRLNRFFWHMIRAPWRDRFLQDAEVLMQEADLTEQEKALIRARDWLGLVQYGANF
FVIEKFARVVRMTNLQVYAIMRGESFEDFMQTRRVPHAR
>Mature_119_residues
MNPQTHGMEQIGGTYLFDLRTSNRALRLNRFFWHMIRAPWRDRFLQDAEVLMQEADLTEQEKALIRARDWLGLVQYGANF
FVIEKFARVVRMTNLQVYAIMRGESFEDFMQTRRVPHAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14269; Mature: 14269

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPQTHGMEQIGGTYLFDLRTSNRALRLNRFFWHMIRAPWRDRFLQDAEVLMQEADLTEQ
CCCCCCCHHHCCCEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHH
EKALIRARDWLGLVQYGANFFVIEKFARVVRMTNLQVYAIMRGESFEDFMQTRRVPHAR
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MNPQTHGMEQIGGTYLFDLRTSNRALRLNRFFWHMIRAPWRDRFLQDAEVLMQEADLTEQ
CCCCCCCHHHCCCEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHH
EKALIRARDWLGLVQYGANFFVIEKFARVVRMTNLQVYAIMRGESFEDFMQTRRVPHAR
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA