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The map label for this gene is pcaH [H]

Identifier: 21241648

GI number: 21241648

Start: 1039714

End: 1040610

Strand: Direct

Name: pcaH [H]

Synonym: XAC0878

Alternate gene names: 21241648

Gene position: 1039714-1040610 (Clockwise)

Preceding gene: 21241646

Following gene: 21241649

Centisome position: 20.09

GC content: 65.44

Gene sequence:

>897_bases
ATGGCAAGCATCATCGGCGGTATCGGGACCTCGCACGTTCCCACCATCGGGGTGGCCTACGACAAGGGCAAGCAGCAGGA
CCCGGTGTGGAAGCCGTTGTTCGACGGCTACACGCCAGTGGCCGCGTGGCTGGCCGCGCAACAGGCCGACGTGCTGGTGT
TCTTCTACAACGACCACTGCACGACGTTCTTCTTCGATCTGTATCCCACCTTCGCGCTGGGCGTGGGCGAGCGCTTTCCG
GTTGCCGACGAGGGCGCGGGCCTGCGCAACCTGCCGCCGATCCGCGGCGACGTGCAGTTGCAGGCGCATATCGCCGAATG
CCTGGTCAATGACGAATTCGACCTGACCGTGTTCCAGGACAAGCCGATCGACCATGGCTGCGCGGCGCCGCTGCCGCTGC
TATGGCCGCATGTGCCGGACTGGCCGGGCACGGTGGTGCCGATCGCCATCAACGTGCTGCAGTATCCGCTGCCGACCGCG
CGGCGCTGCTATCGCCTGGGCCAGGCGGTACGCCGCGCGATCGAATCGTATCCGGAAGATCTTCGGGTGGTGGTGGTAGG
CACCGGTGGGCTATCGCACCAGATCCATGGCGAACGCACCGGGTTCAACAACACCGAATGGGACATGGAATTTCTGGACC
GTTTCCAGCATGCGCCCGAGACCCTCACGCATCTCACCCACACCGATTACGTTCGCCTGGGCGGTGCGGAGAGCGTGGAG
CAGATCATGTGGCTGGCGATGCGCGGCGCGCTGGATGGGCCGATCCGCAAGCTGCATCAGAACTACTACCTGATGACCAC
CACTGCGATGACCGTGGTGCTGTACGAGCCGGGCGAAGAAGCAGCCGGCGCGCCGCGTTCGGCCGAACTGCTTGCGCGCA
CTGCCGCCGCGGCCTGA

Upstream 100 bases:

>100_bases
GGTCGCCCTTTGTTGGGATCCATTGCGTTGCAGATCCCGAATCACCCACTGACGCGCGCCTGCCCTGATCGGGGCCCGGC
CCGCGTCGCAGGAGCGCAAC

Downstream 100 bases:

>100_bases
GGAGGTGCTGATGAATCCGCAAACCCATGGCATGGAGCAGATCGGCGGCACGTACCTGTTCGATCTGCGCACCAGCAATC
GCGCGCTGCGCCTGAACCGC

Product: protocatechuate 4,5-dioxygenase subunit beta

Products: NA

Alternate protein names: 4,5-PCD [H]

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MASIIGGIGTSHVPTIGVAYDKGKQQDPVWKPLFDGYTPVAAWLAAQQADVLVFFYNDHCTTFFFDLYPTFALGVGERFP
VADEGAGLRNLPPIRGDVQLQAHIAECLVNDEFDLTVFQDKPIDHGCAAPLPLLWPHVPDWPGTVVPIAINVLQYPLPTA
RRCYRLGQAVRRAIESYPEDLRVVVVGTGGLSHQIHGERTGFNNTEWDMEFLDRFQHAPETLTHLTHTDYVRLGGAESVE
QIMWLAMRGALDGPIRKLHQNYYLMTTTAMTVVLYEPGEEAAGAPRSAELLARTAAAA

Sequences:

>Translated_298_residues
MASIIGGIGTSHVPTIGVAYDKGKQQDPVWKPLFDGYTPVAAWLAAQQADVLVFFYNDHCTTFFFDLYPTFALGVGERFP
VADEGAGLRNLPPIRGDVQLQAHIAECLVNDEFDLTVFQDKPIDHGCAAPLPLLWPHVPDWPGTVVPIAINVLQYPLPTA
RRCYRLGQAVRRAIESYPEDLRVVVVGTGGLSHQIHGERTGFNNTEWDMEFLDRFQHAPETLTHLTHTDYVRLGGAESVE
QIMWLAMRGALDGPIRKLHQNYYLMTTTAMTVVLYEPGEEAAGAPRSAELLARTAAAA
>Mature_297_residues
ASIIGGIGTSHVPTIGVAYDKGKQQDPVWKPLFDGYTPVAAWLAAQQADVLVFFYNDHCTTFFFDLYPTFALGVGERFPV
ADEGAGLRNLPPIRGDVQLQAHIAECLVNDEFDLTVFQDKPIDHGCAAPLPLLWPHVPDWPGTVVPIAINVLQYPLPTAR
RCYRLGQAVRRAIESYPEDLRVVVVGTGGLSHQIHGERTGFNNTEWDMEFLDRFQHAPETLTHLTHTDYVRLGGAESVEQ
IMWLAMRGALDGPIRKLHQNYYLMTTTAMTVVLYEPGEEAAGAPRSAELLARTAAAA

Specific function: Responsible for the aromatic ring fission of protocatechuate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786544, Length=184, Percent_Identity=32.6086956521739, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004183 [H]

Pfam domain/function: PF02900 LigB [H]

EC number: =1.13.11.8 [H]

Molecular weight: Translated: 32909; Mature: 32778

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASIIGGIGTSHVPTIGVAYDKGKQQDPVWKPLFDGYTPVAAWLAAQQADVLVFFYNDHC
CCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHCCCHHHHHHHHHCCCCEEEEEECCCC
TTFFFDLYPTFALGVGERFPVADEGAGLRNLPPIRGDVQLQAHIAECLVNDEFDLTVFQD
EEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEC
KPIDHGCAAPLPLLWPHVPDWPGTVVPIAINVLQYPLPTARRCYRLGQAVRRAIESYPED
CCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC
LRVVVVGTGGLSHQIHGERTGFNNTEWDMEFLDRFQHAPETLTHLTHTDYVRLGGAESVE
EEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHCCCCEEEECCHHHHH
QIMWLAMRGALDGPIRKLHQNYYLMTTTAMTVVLYEPGEEAAGAPRSAELLARTAAAA
HHHHHHHHCCCCHHHHHHHCCEEEEEEEEEEEEEECCCHHHCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
ASIIGGIGTSHVPTIGVAYDKGKQQDPVWKPLFDGYTPVAAWLAAQQADVLVFFYNDHC
CCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHCCCHHHHHHHHHCCCCEEEEEECCCC
TTFFFDLYPTFALGVGERFPVADEGAGLRNLPPIRGDVQLQAHIAECLVNDEFDLTVFQD
EEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEC
KPIDHGCAAPLPLLWPHVPDWPGTVVPIAINVLQYPLPTARRCYRLGQAVRRAIESYPED
CCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC
LRVVVVGTGGLSHQIHGERTGFNNTEWDMEFLDRFQHAPETLTHLTHTDYVRLGGAESVE
EEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHCCCCEEEECCHHHHH
QIMWLAMRGALDGPIRKLHQNYYLMTTTAMTVVLYEPGEEAAGAPRSAELLARTAAAA
HHHHHHHHCCCCHHHHHHHCCEEEEEEEEEEEEEECCCHHHCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2185230 [H]