Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

Click here to switch to the map view.

The map label for this gene is 21241646

Identifier: 21241646

GI number: 21241646

Start: 1037644

End: 1038639

Strand: Direct

Name: 21241646

Synonym: XAC0876

Alternate gene names: NA

Gene position: 1037644-1038639 (Clockwise)

Preceding gene: 21241645

Following gene: 21241648

Centisome position: 20.05

GC content: 59.14

Gene sequence:

>996_bases
GTGTTGTCGCGTGCGCTGTCGCCTCGTCAACCTGCATTGATCATCGCTGCCTTGCTGGCCGCAGCGTCGCCAGCAGCGTG
GGCGCAGGCTGTGCCGGAAACCGCGGCGCCACCCCAAGGCATCAATTTGGGGGGCACCAGTTTTCTAGATGGCTTCGGCT
CCATGAAGCCTGGATGGACGGCCATCGAGTATCTGCGGTACTACGATTTCGATGCGATCAAAAATGCCAGCGGCGACAAT
TCGCCGGCGTTCCGCGACCCCAAGGTTGGGGTCAGCGTCGCGTTGACTCAGCTCATCTACGTCACGCCATACACCTGGAA
CGGCGGTTCGTTGAGCTTCAATGCGATCGTGCCGCTGGTCAATTACGACACCTCCGTCGCTGCCGATAGCCCGGTGCGCT
TGAGCAGCAATGGCTTGGGTATGGGCGATATCTCGTTCGGGCCGGCGCTGCAGATGCCGCCAGTGATGCGCGATGGGCGG
GTGTTCTTCTTCCAGCGATTTGCCATCGACGCCTTCGCGCCCGTGGGCAAGTTCGATCGCGATATCGCCATCAACCAGAG
TACCGGTTTCTGGTCGGTCGCACCGCATTGGGCCTTCACCGTGCAACCCAGCGACAATTGGGAAATCAGCGGGCGGCTGA
ATTATCTCTACAACTTCCGCACCAGCCGCGCCGGTGGCGTGACGCCGATTCCCGGGTTCCGTTTTCGCAATGGCCAGGCC
GGCGATGTGCTCTGGGCAAACTTCGCCAGCTCGGTCGAGGTTACCGAACAATTGCGTCTGGGCATCAATGGGTATTACCT
GCAGCAGTTGAAGAACAACCGCACCAACGACCAGAGCATCCCCGACAGCAAGCGCAGGCAGTTCTATGTTGGCCCTGGGT
TGTCCTGGCGGTTCGACGAAAAGAACCTTCTCAACTTCAATGTTTACCTCCCTATCGAGGTCGAGAACTCGGTGGCAGGC
AATAGCTATAACCTGATGATTGTGCACTCGCTGTAA

Upstream 100 bases:

>100_bases
TCTCCCCCCTCCACGTCGCGTCGCATCGCAGTCCTCCATTCCCTTTGCATCGGAGATTCGCCTAGTGGAACGCGTCCGTT
CGTCTGCTCGTTGTGGTTCG

Downstream 100 bases:

>100_bases
CGCGCGCCGGTCACCCACATTGCCGGCGCATGCCGGCGTGTGGGTTGGAGCTGGTGCAATGTGCCGAGTGGATCGGCTTG
CGCTGTTTGCGCTGTGCACT

Product: hypothetical protein

Products: NA

Alternate protein names: Signal Peptide Protein; Signal Peptide; Meta-Pathway Phenol Degradation-Like Protein; Protein Involved In Meta-Pathway Of Phenol Degradation; Protein Involved In Meta-Pathway Of Phenol Degradation-Like; Meta-Pathway Phenol Degradation Protein; Involved In Meta-Pathway Of Phenol Degradation Protein; MetA-Pathway Phenol Degradation-Like Protein; Secreted Protein; Lipoprotein

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MLSRALSPRQPALIIAALLAAASPAAWAQAVPETAAPPQGINLGGTSFLDGFGSMKPGWTAIEYLRYYDFDAIKNASGDN
SPAFRDPKVGVSVALTQLIYVTPYTWNGGSLSFNAIVPLVNYDTSVAADSPVRLSSNGLGMGDISFGPALQMPPVMRDGR
VFFFQRFAIDAFAPVGKFDRDIAINQSTGFWSVAPHWAFTVQPSDNWEISGRLNYLYNFRTSRAGGVTPIPGFRFRNGQA
GDVLWANFASSVEVTEQLRLGINGYYLQQLKNNRTNDQSIPDSKRRQFYVGPGLSWRFDEKNLLNFNVYLPIEVENSVAG
NSYNLMIVHSL

Sequences:

>Translated_331_residues
MLSRALSPRQPALIIAALLAAASPAAWAQAVPETAAPPQGINLGGTSFLDGFGSMKPGWTAIEYLRYYDFDAIKNASGDN
SPAFRDPKVGVSVALTQLIYVTPYTWNGGSLSFNAIVPLVNYDTSVAADSPVRLSSNGLGMGDISFGPALQMPPVMRDGR
VFFFQRFAIDAFAPVGKFDRDIAINQSTGFWSVAPHWAFTVQPSDNWEISGRLNYLYNFRTSRAGGVTPIPGFRFRNGQA
GDVLWANFASSVEVTEQLRLGINGYYLQQLKNNRTNDQSIPDSKRRQFYVGPGLSWRFDEKNLLNFNVYLPIEVENSVAG
NSYNLMIVHSL
>Mature_331_residues
MLSRALSPRQPALIIAALLAAASPAAWAQAVPETAAPPQGINLGGTSFLDGFGSMKPGWTAIEYLRYYDFDAIKNASGDN
SPAFRDPKVGVSVALTQLIYVTPYTWNGGSLSFNAIVPLVNYDTSVAADSPVRLSSNGLGMGDISFGPALQMPPVMRDGR
VFFFQRFAIDAFAPVGKFDRDIAINQSTGFWSVAPHWAFTVQPSDNWEISGRLNYLYNFRTSRAGGVTPIPGFRFRNGQA
GDVLWANFASSVEVTEQLRLGINGYYLQQLKNNRTNDQSIPDSKRRQFYVGPGLSWRFDEKNLLNFNVYLPIEVENSVAG
NSYNLMIVHSL

Specific function: Unknown

COG id: COG4313

COG function: function code C; Protein involved in meta-pathway of phenol degradation

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36355; Mature: 36355

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSRALSPRQPALIIAALLAAASPAAWAQAVPETAAPPQGINLGGTSFLDGFGSMKPGWT
CCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCHH
AIEYLRYYDFDAIKNASGDNSPAFRDPKVGVSVALTQLIYVTPYTWNGGSLSFNAIVPLV
HHHHHHHHCHHHHCCCCCCCCCCCCCCCCCHHHEEEEEEEEECEEECCCCEEEEEEEEEE
NYDTSVAADSPVRLSSNGLGMGDISFGPALQMPPVMRDGRVFFFQRFAIDAFAPVGKFDR
ECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHCCCCCCCC
DIAINQSTGFWSVAPHWAFTVQPSDNWEISGRLNYLYNFRTSRAGGVTPIPGFRFRNGQA
CEEEECCCCEEEECCCEEEEECCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCEECCCCC
GDVLWANFASSVEVTEQLRLGINGYYLQQLKNNRTNDQSIPDSKRRQFYVGPGLSWRFDE
CCEEEECCCCCHHHHHHHHCCCCCEEHHHHHCCCCCCCCCCCCCCCEEEECCCCEEEECC
KNLLNFNVYLPIEVENSVAGNSYNLMIVHSL
CCEEEEEEEEEEEECCCCCCCCEEEEEEECC
>Mature Secondary Structure
MLSRALSPRQPALIIAALLAAASPAAWAQAVPETAAPPQGINLGGTSFLDGFGSMKPGWT
CCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCHH
AIEYLRYYDFDAIKNASGDNSPAFRDPKVGVSVALTQLIYVTPYTWNGGSLSFNAIVPLV
HHHHHHHHCHHHHCCCCCCCCCCCCCCCCCHHHEEEEEEEEECEEECCCCEEEEEEEEEE
NYDTSVAADSPVRLSSNGLGMGDISFGPALQMPPVMRDGRVFFFQRFAIDAFAPVGKFDR
ECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHCCCCCCCC
DIAINQSTGFWSVAPHWAFTVQPSDNWEISGRLNYLYNFRTSRAGGVTPIPGFRFRNGQA
CEEEECCCCEEEECCCEEEEECCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCEECCCCC
GDVLWANFASSVEVTEQLRLGINGYYLQQLKNNRTNDQSIPDSKRRQFYVGPGLSWRFDE
CCEEEECCCCCHHHHHHHHCCCCCEEHHHHHCCCCCCCCCCCCCCCEEEECCCCEEEECC
KNLLNFNVYLPIEVENSVAGNSYNLMIVHSL
CCEEEEEEEEEEEECCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA