| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241646
Identifier: 21241646
GI number: 21241646
Start: 1037644
End: 1038639
Strand: Direct
Name: 21241646
Synonym: XAC0876
Alternate gene names: NA
Gene position: 1037644-1038639 (Clockwise)
Preceding gene: 21241645
Following gene: 21241648
Centisome position: 20.05
GC content: 59.14
Gene sequence:
>996_bases GTGTTGTCGCGTGCGCTGTCGCCTCGTCAACCTGCATTGATCATCGCTGCCTTGCTGGCCGCAGCGTCGCCAGCAGCGTG GGCGCAGGCTGTGCCGGAAACCGCGGCGCCACCCCAAGGCATCAATTTGGGGGGCACCAGTTTTCTAGATGGCTTCGGCT CCATGAAGCCTGGATGGACGGCCATCGAGTATCTGCGGTACTACGATTTCGATGCGATCAAAAATGCCAGCGGCGACAAT TCGCCGGCGTTCCGCGACCCCAAGGTTGGGGTCAGCGTCGCGTTGACTCAGCTCATCTACGTCACGCCATACACCTGGAA CGGCGGTTCGTTGAGCTTCAATGCGATCGTGCCGCTGGTCAATTACGACACCTCCGTCGCTGCCGATAGCCCGGTGCGCT TGAGCAGCAATGGCTTGGGTATGGGCGATATCTCGTTCGGGCCGGCGCTGCAGATGCCGCCAGTGATGCGCGATGGGCGG GTGTTCTTCTTCCAGCGATTTGCCATCGACGCCTTCGCGCCCGTGGGCAAGTTCGATCGCGATATCGCCATCAACCAGAG TACCGGTTTCTGGTCGGTCGCACCGCATTGGGCCTTCACCGTGCAACCCAGCGACAATTGGGAAATCAGCGGGCGGCTGA ATTATCTCTACAACTTCCGCACCAGCCGCGCCGGTGGCGTGACGCCGATTCCCGGGTTCCGTTTTCGCAATGGCCAGGCC GGCGATGTGCTCTGGGCAAACTTCGCCAGCTCGGTCGAGGTTACCGAACAATTGCGTCTGGGCATCAATGGGTATTACCT GCAGCAGTTGAAGAACAACCGCACCAACGACCAGAGCATCCCCGACAGCAAGCGCAGGCAGTTCTATGTTGGCCCTGGGT TGTCCTGGCGGTTCGACGAAAAGAACCTTCTCAACTTCAATGTTTACCTCCCTATCGAGGTCGAGAACTCGGTGGCAGGC AATAGCTATAACCTGATGATTGTGCACTCGCTGTAA
Upstream 100 bases:
>100_bases TCTCCCCCCTCCACGTCGCGTCGCATCGCAGTCCTCCATTCCCTTTGCATCGGAGATTCGCCTAGTGGAACGCGTCCGTT CGTCTGCTCGTTGTGGTTCG
Downstream 100 bases:
>100_bases CGCGCGCCGGTCACCCACATTGCCGGCGCATGCCGGCGTGTGGGTTGGAGCTGGTGCAATGTGCCGAGTGGATCGGCTTG CGCTGTTTGCGCTGTGCACT
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide Protein; Signal Peptide; Meta-Pathway Phenol Degradation-Like Protein; Protein Involved In Meta-Pathway Of Phenol Degradation; Protein Involved In Meta-Pathway Of Phenol Degradation-Like; Meta-Pathway Phenol Degradation Protein; Involved In Meta-Pathway Of Phenol Degradation Protein; MetA-Pathway Phenol Degradation-Like Protein; Secreted Protein; Lipoprotein
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MLSRALSPRQPALIIAALLAAASPAAWAQAVPETAAPPQGINLGGTSFLDGFGSMKPGWTAIEYLRYYDFDAIKNASGDN SPAFRDPKVGVSVALTQLIYVTPYTWNGGSLSFNAIVPLVNYDTSVAADSPVRLSSNGLGMGDISFGPALQMPPVMRDGR VFFFQRFAIDAFAPVGKFDRDIAINQSTGFWSVAPHWAFTVQPSDNWEISGRLNYLYNFRTSRAGGVTPIPGFRFRNGQA GDVLWANFASSVEVTEQLRLGINGYYLQQLKNNRTNDQSIPDSKRRQFYVGPGLSWRFDEKNLLNFNVYLPIEVENSVAG NSYNLMIVHSL
Sequences:
>Translated_331_residues MLSRALSPRQPALIIAALLAAASPAAWAQAVPETAAPPQGINLGGTSFLDGFGSMKPGWTAIEYLRYYDFDAIKNASGDN SPAFRDPKVGVSVALTQLIYVTPYTWNGGSLSFNAIVPLVNYDTSVAADSPVRLSSNGLGMGDISFGPALQMPPVMRDGR VFFFQRFAIDAFAPVGKFDRDIAINQSTGFWSVAPHWAFTVQPSDNWEISGRLNYLYNFRTSRAGGVTPIPGFRFRNGQA GDVLWANFASSVEVTEQLRLGINGYYLQQLKNNRTNDQSIPDSKRRQFYVGPGLSWRFDEKNLLNFNVYLPIEVENSVAG NSYNLMIVHSL >Mature_331_residues MLSRALSPRQPALIIAALLAAASPAAWAQAVPETAAPPQGINLGGTSFLDGFGSMKPGWTAIEYLRYYDFDAIKNASGDN SPAFRDPKVGVSVALTQLIYVTPYTWNGGSLSFNAIVPLVNYDTSVAADSPVRLSSNGLGMGDISFGPALQMPPVMRDGR VFFFQRFAIDAFAPVGKFDRDIAINQSTGFWSVAPHWAFTVQPSDNWEISGRLNYLYNFRTSRAGGVTPIPGFRFRNGQA GDVLWANFASSVEVTEQLRLGINGYYLQQLKNNRTNDQSIPDSKRRQFYVGPGLSWRFDEKNLLNFNVYLPIEVENSVAG NSYNLMIVHSL
Specific function: Unknown
COG id: COG4313
COG function: function code C; Protein involved in meta-pathway of phenol degradation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36355; Mature: 36355
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSRALSPRQPALIIAALLAAASPAAWAQAVPETAAPPQGINLGGTSFLDGFGSMKPGWT CCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCHH AIEYLRYYDFDAIKNASGDNSPAFRDPKVGVSVALTQLIYVTPYTWNGGSLSFNAIVPLV HHHHHHHHCHHHHCCCCCCCCCCCCCCCCCHHHEEEEEEEEECEEECCCCEEEEEEEEEE NYDTSVAADSPVRLSSNGLGMGDISFGPALQMPPVMRDGRVFFFQRFAIDAFAPVGKFDR ECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHCCCCCCCC DIAINQSTGFWSVAPHWAFTVQPSDNWEISGRLNYLYNFRTSRAGGVTPIPGFRFRNGQA CEEEECCCCEEEECCCEEEEECCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCEECCCCC GDVLWANFASSVEVTEQLRLGINGYYLQQLKNNRTNDQSIPDSKRRQFYVGPGLSWRFDE CCEEEECCCCCHHHHHHHHCCCCCEEHHHHHCCCCCCCCCCCCCCCEEEECCCCEEEECC KNLLNFNVYLPIEVENSVAGNSYNLMIVHSL CCEEEEEEEEEEEECCCCCCCCEEEEEEECC >Mature Secondary Structure MLSRALSPRQPALIIAALLAAASPAAWAQAVPETAAPPQGINLGGTSFLDGFGSMKPGWT CCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCHH AIEYLRYYDFDAIKNASGDNSPAFRDPKVGVSVALTQLIYVTPYTWNGGSLSFNAIVPLV HHHHHHHHCHHHHCCCCCCCCCCCCCCCCCHHHEEEEEEEEECEEECCCCEEEEEEEEEE NYDTSVAADSPVRLSSNGLGMGDISFGPALQMPPVMRDGRVFFFQRFAIDAFAPVGKFDR ECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHCCCCCCCC DIAINQSTGFWSVAPHWAFTVQPSDNWEISGRLNYLYNFRTSRAGGVTPIPGFRFRNGQA CEEEECCCCEEEECCCEEEEECCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCEECCCCC GDVLWANFASSVEVTEQLRLGINGYYLQQLKNNRTNDQSIPDSKRRQFYVGPGLSWRFDE CCEEEECCCCCHHHHHHHHCCCCCEEHHHHHCCCCCCCCCCCCCCCEEEECCCCEEEECC KNLLNFNVYLPIEVENSVAGNSYNLMIVHSL CCEEEEEEEEEEEECCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA