Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

Click here to switch to the map view.

The map label for this gene is xcp [H]

Identifier: 21241565

GI number: 21241565

Start: 943085

End: 944842

Strand: Direct

Name: xcp [H]

Synonym: XAC0795

Alternate gene names: 21241565

Gene position: 943085-944842 (Clockwise)

Preceding gene: 21241564

Following gene: 21241567

Centisome position: 18.22

GC content: 67.01

Gene sequence:

>1758_bases
ATGGTGACGCGCTCTTTCTCTCACGCCGTCCTGGCTTGCGCCGTTGCGCTGGGTATGATCGGTATCGCGCCGGCAGCCGA
ACAGGCACCTGCGCAACTGGCCGTCGGTGGCGCGCTGGCGCCGCAACGCATCCTGCAGGTGGGATTGGTGCTCAAGCCAC
AGGTGGCCATGCGCCAGCAACATGCGGCGGTGGAGCAGTGGTTGATGCGCGATGGCGGCGATCCGCTGTTGCGCGGTCAA
CTGGCCCGCGCATCGGCTGCTTCCACCAGCCAGATCGCACAGGTCAAGGCCTATCTGAGCCGGTATGGCATCACCGATGT
GCGCCCGGCCACCGATGGACGCTTGCTGCAAGTCCGTGCGACAGCGGCGGCATTGCAGGCCGCCCTTGGCACCCCGCTGC
GTGTAGTGAGTGCCGATGGCCGCGTCGGCATTGCCGCCGCGCAGGGCGCGGTCGCAGTGCCGGCAGGCTTGCAGGCAGTG
GTGCAAGGCGTGGTTGGCCTGGACGGTACCGCCGGCGCAAAGGTCGCGCCGCACGGGGCGCCGCTGAGCGCCGCGCGCAC
ATCGTTATCGAACAGTAGCGCCGTGGTGGCCGCCAATAGCGGCGGCGCGGAAGTCGTGCGCCACAGCATCGAAGAGCTCA
ATAGCGCCTACGGCGCCGATACGCTGGCGCCGGCCAGCGATATCGTCGGCGCGGTCATTGCCGCCGGCAATCTGGAACAG
ACCCTCGTGCGTCTGCAGAGCTTCCAGGCCCTGCACGGCCTGCACACCCCGGTCACGGTGGTGACGGTGGGCGAACCCGG
TGCACCGGGCTATCAGTCCAACGCTGCCAGCAAGGATTCCGAAGTCGAGTGGGACATGGATACCCAGTTGCTGGTCGGCA
GCGCCGGCGGGTTGAAGCGCCTGATCATCTACAACATCCCGGATTTTTCCTGGAACAGCATGATCGATGGCATGGCGCGC
GCGGCCGACGACAACCTGGCCCGCGTGGTCAGCATGTCGATCTATGGGCAGGAAATCCAGGTCGACGACGCGGTCTTCCA
GGCCATGGACGCCAGCCTGACCAAGGCGGTGCGCCAGGGGCAGAACTTCGTGATCTGCAGCGGCGACGATGGCGTCTACC
TGCCGCTGAGCGCACGCGCCAACGCGCCTTATTACGACACGCTGGCGGGGCGCCCGGACCTGCGCCAGGTCGGTTGGCCG
GCCTCGCACCGCTACGCGATCGCGGTGGGCGCCACCGAGTTGCTGACCCAGGGCGGTAACCCCGGCAGCTACGCCTCCGA
GCGCGTCTGGAATGCCGGTGTCGGCCGCCAACTCAGCCAGGGCGGCGTGAGCAAGATTGCCTATGCGCCGCAGTGGCAGC
GCACCCTGCTGCCGGGGCAGACGGCCTCCGGCTACCGCGCTGTACCCGATGTCAGCTTCAATGGCTCGTTCTACAGCAGT
GCGCAGATCCGCGGCACCGATGCGCAGGGTAACGAGGCTGCCTGGTATGTGTGGGGGACCAGTGCCGCCACCCCGACCTT
CGCCGGCTATATCGCCCGGCTGTTGCAGTCGCATCCCAATCTGGGCTTCGTCGCGCCGCAGATCTATCAGTACGCGAGCC
AGCGCCACGATGCGCAGCGCGCCCATGACGTCGTGGTCGGCAGTAATGGCCTGTATCGCGATGGATACAACGCGAGCTAC
GGTTGGGACTTCGCGTCGGGCTGGGGCAGCATGAACATCGGCGACTTCGACCGTTTCCTGACGCAGGCATCGCCATGA

Upstream 100 bases:

>100_bases
ATCGTTTTACGCACACAGAGTTCGCACTGTCGCGTCTGAAATCACTGCCGCCTCGTGAGAATCCGCAGCCCGTTAACTCA
CGATCAATGGCGGCAAACGA

Downstream 100 bases:

>100_bases
CCTTCATTGCGCGGTGAGCGTGCCGCGCGTGCGGGCCTCCAACCACCGCCATGCCGGTCTTGGGTCACGATGCTGACGCT
GAGCGTGGCGGCTTGCGGGC

Product: protease

Products: NA

Alternate protein names: Pepstatin-insensitive carboxyl proteinase; Pseudomonapepsin [H]

Number of amino acids: Translated: 585; Mature: 585

Protein sequence:

>585_residues
MVTRSFSHAVLACAVALGMIGIAPAAEQAPAQLAVGGALAPQRILQVGLVLKPQVAMRQQHAAVEQWLMRDGGDPLLRGQ
LARASAASTSQIAQVKAYLSRYGITDVRPATDGRLLQVRATAAALQAALGTPLRVVSADGRVGIAAAQGAVAVPAGLQAV
VQGVVGLDGTAGAKVAPHGAPLSAARTSLSNSSAVVAANSGGAEVVRHSIEELNSAYGADTLAPASDIVGAVIAAGNLEQ
TLVRLQSFQALHGLHTPVTVVTVGEPGAPGYQSNAASKDSEVEWDMDTQLLVGSAGGLKRLIIYNIPDFSWNSMIDGMAR
AADDNLARVVSMSIYGQEIQVDDAVFQAMDASLTKAVRQGQNFVICSGDDGVYLPLSARANAPYYDTLAGRPDLRQVGWP
ASHRYAIAVGATELLTQGGNPGSYASERVWNAGVGRQLSQGGVSKIAYAPQWQRTLLPGQTASGYRAVPDVSFNGSFYSS
AQIRGTDAQGNEAAWYVWGTSAATPTFAGYIARLLQSHPNLGFVAPQIYQYASQRHDAQRAHDVVVGSNGLYRDGYNASY
GWDFASGWGSMNIGDFDRFLTQASP

Sequences:

>Translated_585_residues
MVTRSFSHAVLACAVALGMIGIAPAAEQAPAQLAVGGALAPQRILQVGLVLKPQVAMRQQHAAVEQWLMRDGGDPLLRGQ
LARASAASTSQIAQVKAYLSRYGITDVRPATDGRLLQVRATAAALQAALGTPLRVVSADGRVGIAAAQGAVAVPAGLQAV
VQGVVGLDGTAGAKVAPHGAPLSAARTSLSNSSAVVAANSGGAEVVRHSIEELNSAYGADTLAPASDIVGAVIAAGNLEQ
TLVRLQSFQALHGLHTPVTVVTVGEPGAPGYQSNAASKDSEVEWDMDTQLLVGSAGGLKRLIIYNIPDFSWNSMIDGMAR
AADDNLARVVSMSIYGQEIQVDDAVFQAMDASLTKAVRQGQNFVICSGDDGVYLPLSARANAPYYDTLAGRPDLRQVGWP
ASHRYAIAVGATELLTQGGNPGSYASERVWNAGVGRQLSQGGVSKIAYAPQWQRTLLPGQTASGYRAVPDVSFNGSFYSS
AQIRGTDAQGNEAAWYVWGTSAATPTFAGYIARLLQSHPNLGFVAPQIYQYASQRHDAQRAHDVVVGSNGLYRDGYNASY
GWDFASGWGSMNIGDFDRFLTQASP
>Mature_585_residues
MVTRSFSHAVLACAVALGMIGIAPAAEQAPAQLAVGGALAPQRILQVGLVLKPQVAMRQQHAAVEQWLMRDGGDPLLRGQ
LARASAASTSQIAQVKAYLSRYGITDVRPATDGRLLQVRATAAALQAALGTPLRVVSADGRVGIAAAQGAVAVPAGLQAV
VQGVVGLDGTAGAKVAPHGAPLSAARTSLSNSSAVVAANSGGAEVVRHSIEELNSAYGADTLAPASDIVGAVIAAGNLEQ
TLVRLQSFQALHGLHTPVTVVTVGEPGAPGYQSNAASKDSEVEWDMDTQLLVGSAGGLKRLIIYNIPDFSWNSMIDGMAR
AADDNLARVVSMSIYGQEIQVDDAVFQAMDASLTKAVRQGQNFVICSGDDGVYLPLSARANAPYYDTLAGRPDLRQVGWP
ASHRYAIAVGATELLTQGGNPGSYASERVWNAGVGRQLSQGGVSKIAYAPQWQRTLLPGQTASGYRAVPDVSFNGSFYSS
AQIRGTDAQGNEAAWYVWGTSAATPTFAGYIARLLQSHPNLGFVAPQIYQYASQRHDAQRAHDVVVGSNGLYRDGYNASY
GWDFASGWGSMNIGDFDRFLTQASP

Specific function: Unknown

COG id: COG4934

COG function: function code O; Predicted protease

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S53 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015366
- InterPro:   IPR000209
- InterPro:   IPR022398
- InterPro:   IPR009020 [H]

Pfam domain/function: PF00082 Peptidase_S8; PF09286 Pro-kuma_activ [H]

EC number: =3.4.21.100 [H]

Molecular weight: Translated: 61073; Mature: 61073

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: PS00138 SUBTILASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTRSFSHAVLACAVALGMIGIAPAAEQAPAQLAVGGALAPQRILQVGLVLKPQVAMRQQ
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHCCEECCHHHHHHH
HAAVEQWLMRDGGDPLLRGQLARASAASTSQIAQVKAYLSRYGITDVRPATDGRLLQVRA
HHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHH
TAAALQAALGTPLRVVSADGRVGIAAAQGAVAVPAGLQAVVQGVVGLDGTAGAKVAPHGA
HHHHHHHHHCCCEEEEECCCCEEEEECCCCEECCHHHHHHHHHHHCCCCCCCCEECCCCC
PLSAARTSLSNSSAVVAANSGGAEVVRHSIEELNSAYGADTLAPASDIVGAVIAAGNLEQ
CHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHH
TLVRLQSFQALHGLHTPVTVVTVGEPGAPGYQSNAASKDSEVEWDMDTQLLVGSAGGLKR
HHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCEE
LIIYNIPDFSWNSMIDGMARAADDNLARVVSMSIYGQEIQVDDAVFQAMDASLTKAVRQG
EEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHCC
QNFVICSGDDGVYLPLSARANAPYYDTLAGRPDLRQVGWPASHRYAIAVGATELLTQGGN
CCEEEECCCCCEEEEEECCCCCCCHHCCCCCCCHHHCCCCCCCCEEEEECHHHHHHCCCC
PGSYASERVWNAGVGRQLSQGGVSKIAYAPQWQRTLLPGQTASGYRAVPDVSFNGSFYSS
CCCHHHHHHHCCCCCCHHHCCCCHHEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCEECC
AQIRGTDAQGNEAAWYVWGTSAATPTFAGYIARLLQSHPNLGFVAPQIYQYASQRHDAQR
CEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
AHDVVVGSNGLYRDGYNASYGWDFASGWGSMNIGDFDRFLTQASP
HHEEEECCCCCEECCCCCCCCCCHHCCCCCCCCCHHHHHHHCCCC
>Mature Secondary Structure
MVTRSFSHAVLACAVALGMIGIAPAAEQAPAQLAVGGALAPQRILQVGLVLKPQVAMRQQ
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHCCEECCHHHHHHH
HAAVEQWLMRDGGDPLLRGQLARASAASTSQIAQVKAYLSRYGITDVRPATDGRLLQVRA
HHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHH
TAAALQAALGTPLRVVSADGRVGIAAAQGAVAVPAGLQAVVQGVVGLDGTAGAKVAPHGA
HHHHHHHHHCCCEEEEECCCCEEEEECCCCEECCHHHHHHHHHHHCCCCCCCCEECCCCC
PLSAARTSLSNSSAVVAANSGGAEVVRHSIEELNSAYGADTLAPASDIVGAVIAAGNLEQ
CHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHH
TLVRLQSFQALHGLHTPVTVVTVGEPGAPGYQSNAASKDSEVEWDMDTQLLVGSAGGLKR
HHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCEE
LIIYNIPDFSWNSMIDGMARAADDNLARVVSMSIYGQEIQVDDAVFQAMDASLTKAVRQG
EEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHCC
QNFVICSGDDGVYLPLSARANAPYYDTLAGRPDLRQVGWPASHRYAIAVGATELLTQGGN
CCEEEECCCCCEEEEEECCCCCCCHHCCCCCCCHHHCCCCCCCCEEEEECHHHHHHCCCC
PGSYASERVWNAGVGRQLSQGGVSKIAYAPQWQRTLLPGQTASGYRAVPDVSFNGSFYSS
CCCHHHHHHHCCCCCCHHHCCCCHHEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCEECC
AQIRGTDAQGNEAAWYVWGTSAATPTFAGYIARLLQSHPNLGFVAPQIYQYASQRHDAQR
CEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
AHDVVVGSNGLYRDGYNASYGWDFASGWGSMNIGDFDRFLTQASP
HHEEEECCCCCEECCCCCCCCCCHHCCCCCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7929375; 8576087; 10488127; 11747435; 11323721 [H]