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The map label for this gene is ydgJ [H]

Identifier: 21241452

GI number: 21241452

Start: 806916

End: 807971

Strand: Reverse

Name: ydgJ [H]

Synonym: XAC0681

Alternate gene names: 21241452

Gene position: 807971-806916 (Counterclockwise)

Preceding gene: 21241458

Following gene: 21241443

Centisome position: 15.61

GC content: 67.05

Gene sequence:

>1056_bases
ATGCCTAAACTGTTCAATCTGGCCGTCGTCGGCTATGGCTATGTCGGCCGCACCTTTCATGCACCGCTGATCGCAAGCAC
CCCCGGCCTGCAGCTGCACAGCGTGGTGTCGTCCAAGCCGCAACAGCCACAGGCCGATTTCCCCGGCGTCACCGTGGTGG
CCGACCTCGACAGTGCGCTGGCCGATCCCGCACTGGATGCCGTGGTGCTGGCTACCCCGAACCACACCCATGCGCCCTTC
GCGCTGGAGGCCTTGGCCGCCGGCAAGCATGTGCTGGTGGACAAGCCGTTCGCGCTGGATGCGACGCAGGCGCAACAGAT
GGTCGATGCCGCCAACGCCGCGGGACGCATCATCAGCGTGTTCCAGAATCGCCGCTGGGATGCGGACTTTCTCACCGTGC
GCCGGCTGATCGAAGAAGGCCAGCTGGGCGAGGTGGTGGAATTTCATTCGCACTTCGACCGCTATCGCCCGCAGGTACGC
GACCGTTGGCGCGAGAGCGATAGCCCCGGTGCCGGACTGTGGTACGACCTGGGCCCGCATCTGCTCGATCAGGCGATGCA
GTTGTTCGGTATGCCGCAGGGCATTGGCGCGGATCTGCAACGTCAGCGCGACCAGGCACGCAGCGTCGATTATTTCCATG
TCACCCTGCACTACCCCCGGCTGCGCGTGATTCTGCACGCCGGGTCGCTGGTGGCCGATGGGAGCCTGCGCTTCGCCGTG
CACGGCACGCGTGGCAGTTACCTCAAGCACGGCCTGGATACGCAAGAAGACCAGCTGCGCGCGGGCCGTCGGCCCGGCAC
GGTCGGTTGGGGCGTGGACCCCTTACCAGGCACGCTCACCCGCGTCGATGACGAAGGCCGCGTCCACACCCATCAGCCCG
ATAACCTGCCGGGCGACTACCGGCAGTGCTACGCCGCCTTTCGCGACGCACTGGCAGGCACCGGCCCGGCGCCGGTCAGC
AGCAGCGATGCGGTGCAGCTGATGCAGCTGGTGGACCTTGCGCAACGCGGCGCTGCGGACGGCCGAGTGCAGTGGCTGGA
TGCCGCGCGCGACTGA

Upstream 100 bases:

>100_bases
AGCAGACGTGACCGTTGCATGCAGAGGTTGTGAACCCTGCGCACACGGGCAGGTGCAATACCATGCCGGCTCCCTCCGTC
GTTGCGATGAACCGTTTTCA

Downstream 100 bases:

>100_bases
TCACGCTGAGACGGTTCTGTACTTCCAACAGTGCGCGCCGCGATCCGGCGCGCACAGCCATCGCATCCCAGCCCTTACGC
GTCCTTGCTACCGATCGTCG

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MPKLFNLAVVGYGYVGRTFHAPLIASTPGLQLHSVVSSKPQQPQADFPGVTVVADLDSALADPALDAVVLATPNHTHAPF
ALEALAAGKHVLVDKPFALDATQAQQMVDAANAAGRIISVFQNRRWDADFLTVRRLIEEGQLGEVVEFHSHFDRYRPQVR
DRWRESDSPGAGLWYDLGPHLLDQAMQLFGMPQGIGADLQRQRDQARSVDYFHVTLHYPRLRVILHAGSLVADGSLRFAV
HGTRGSYLKHGLDTQEDQLRAGRRPGTVGWGVDPLPGTLTRVDDEGRVHTHQPDNLPGDYRQCYAAFRDALAGTGPAPVS
SSDAVQLMQLVDLAQRGAADGRVQWLDAARD

Sequences:

>Translated_351_residues
MPKLFNLAVVGYGYVGRTFHAPLIASTPGLQLHSVVSSKPQQPQADFPGVTVVADLDSALADPALDAVVLATPNHTHAPF
ALEALAAGKHVLVDKPFALDATQAQQMVDAANAAGRIISVFQNRRWDADFLTVRRLIEEGQLGEVVEFHSHFDRYRPQVR
DRWRESDSPGAGLWYDLGPHLLDQAMQLFGMPQGIGADLQRQRDQARSVDYFHVTLHYPRLRVILHAGSLVADGSLRFAV
HGTRGSYLKHGLDTQEDQLRAGRRPGTVGWGVDPLPGTLTRVDDEGRVHTHQPDNLPGDYRQCYAAFRDALAGTGPAPVS
SSDAVQLMQLVDLAQRGAADGRVQWLDAARD
>Mature_350_residues
PKLFNLAVVGYGYVGRTFHAPLIASTPGLQLHSVVSSKPQQPQADFPGVTVVADLDSALADPALDAVVLATPNHTHAPFA
LEALAAGKHVLVDKPFALDATQAQQMVDAANAAGRIISVFQNRRWDADFLTVRRLIEEGQLGEVVEFHSHFDRYRPQVRD
RWRESDSPGAGLWYDLGPHLLDQAMQLFGMPQGIGADLQRQRDQARSVDYFHVTLHYPRLRVILHAGSLVADGSLRFAVH
GTRGSYLKHGLDTQEDQLRAGRRPGTVGWGVDPLPGTLTRVDDEGRVHTHQPDNLPGDYRQCYAAFRDALAGTGPAPVSS
SDAVQLMQLVDLAQRGAADGRVQWLDAARD

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87081947, Length=338, Percent_Identity=52.0710059171598, Blast_Score=342, Evalue=3e-95,
Organism=Escherichia coli, GI1789848, Length=336, Percent_Identity=33.3333333333333, Blast_Score=199, Evalue=2e-52,
Organism=Escherichia coli, GI1787574, Length=190, Percent_Identity=30, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI87082405, Length=275, Percent_Identity=26.5454545454545, Blast_Score=75, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 38376; Mature: 38244

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKLFNLAVVGYGYVGRTFHAPLIASTPGLQLHSVVSSKPQQPQADFPGVTVVADLDSAL
CCCEEEEEEEECCCCCCHHCCCEEECCCCCHHHHHHHCCCCCCCCCCCCEEEEECCHHHH
ADPALDAVVLATPNHTHAPFALEALAAGKHVLVDKPFALDATQAQQMVDAANAAGRIISV
CCCCCCEEEEECCCCCCCCHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
FQNRRWDADFLTVRRLIEEGQLGEVVEFHSHFDRYRPQVRDRWRESDSPGAGLWYDLGPH
HHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCHHHCCHH
LLDQAMQLFGMPQGIGADLQRQRDQARSVDYFHVTLHYPRLRVILHAGSLVADGSLRFAV
HHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEEEEECCEEEEEEECCCEEECCCEEEEE
HGTRGSYLKHGLDTQEDQLRAGRRPGTVGWGVDPLPGTLTRVDDEGRVHTHQPDNLPGDY
ECCCCHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCEECCCCCCCCHHH
RQCYAAFRDALAGTGPAPVSSSDAVQLMQLVDLAQRGAADGRVQWLDAARD
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCC
>Mature Secondary Structure 
PKLFNLAVVGYGYVGRTFHAPLIASTPGLQLHSVVSSKPQQPQADFPGVTVVADLDSAL
CCEEEEEEEECCCCCCHHCCCEEECCCCCHHHHHHHCCCCCCCCCCCCEEEEECCHHHH
ADPALDAVVLATPNHTHAPFALEALAAGKHVLVDKPFALDATQAQQMVDAANAAGRIISV
CCCCCCEEEEECCCCCCCCHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
FQNRRWDADFLTVRRLIEEGQLGEVVEFHSHFDRYRPQVRDRWRESDSPGAGLWYDLGPH
HHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCHHHCCHH
LLDQAMQLFGMPQGIGADLQRQRDQARSVDYFHVTLHYPRLRVILHAGSLVADGSLRFAV
HHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEEEEECCEEEEEEECCCEEECCCEEEEE
HGTRGSYLKHGLDTQEDQLRAGRRPGTVGWGVDPLPGTLTRVDDEGRVHTHQPDNLPGDY
ECCCCHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCEECCCCCCCCHHH
RQCYAAFRDALAGTGPAPVSSSDAVQLMQLVDLAQRGAADGRVQWLDAARD
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]