| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241443
Identifier: 21241443
GI number: 21241443
Start: 797206
End: 798069
Strand: Reverse
Name: 21241443
Synonym: XAC0672
Alternate gene names: NA
Gene position: 798069-797206 (Counterclockwise)
Preceding gene: 21241452
Following gene: 21241441
Centisome position: 15.42
GC content: 65.05
Gene sequence:
>864_bases ATGCCACGCTCCATCGCGCAGGTGCTGCGCTGCCTTCTGGCAATCGGTGCACTGTCGTGCATCGCCCTACCCGCGCTGGC TGGCACGCCGGTGGCACCACTGCGGGTCATGTCGTTCAACGTGCGCGTGCCGGCCGATACCGATGGCGACAAACGCTGGC AAGTGCGTCGCGCTGCCATGGTCGCCTTGATCAAACAGACGCATCCCGATGTGTTCGGCACGCAGGAACTGGTGAGCGAA CAGGCGGCCTTTCTGGCCGAACAGTTGCCCGACTACCGCTGGTTCGGCCAGGGCCGGCGCGGCGATGACAGCGACGAGCA CATGGGCGTGTTCTACGACGCGCGCGTCCTGGAAGTGGTGGAGTCAGGCGACTTCTGGCTGTCCGACACGCCCGAACGCG CCGGCAGCATCACCTGGGGCAATGTACTGCCCCGCATGGCCACGTGGGCGCTGTTCGAGCGCCGCAGCGACAAACGCCGC TTTTACCTGTTCAATACGCACTTTCCGTATCGCGATGAGGACGAGCCCGCCCGCGAGCGCAGCGCGCGCCTGATCCTGTC GCGCATCGCGCAGTTGCCTGCCACGATTCCGGTGGTGCTGACCGGCGACTTCAACAGCGATCCGGACAAGATCACCTACC CCACGCTGACCGCAGTACTTCGCGATGCGCGCGCACAGGCCAGCAAGCGCAGCGGGCCGGAAAATACCTTCCAGGATTTC ACCACGCACCCGACCCGGCGCATCGACTGGATCCTGTATCGCGGATTGCGTCCTTCCCGCTTTGCGACACTGGACGATCG TCCCGGCGGCATTCTGCCGTCGGACCATTACCCAGTGATGGCCGAGTTCGAGTGGCCACGCTGA
Upstream 100 bases:
>100_bases AGCGGCCGCTTGCCTGTGCCTCGGTGATCGTCGCCGTGACGCAGCGGTCATCATCTCTGGCTAGACTCGGCGCTCTTGCT TCTTCGAGGAATTTCCCTGC
Downstream 100 bases:
>100_bases AAACACGGACGTGCAAGAGCCGTTGGCCGGCAGCCAGGCGCGTGCCGGCTGTGACACGGCCACCCGATGCCCGCAGCGCT GCGGTCATCAAGCCGGATGA
Product: hypothetical protein
Products: NA
Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family Protein; Endonuclease/Exonuclease/Phosphatase Family; Metal-Dependent Hydrolase; Secreted Protein
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MPRSIAQVLRCLLAIGALSCIALPALAGTPVAPLRVMSFNVRVPADTDGDKRWQVRRAAMVALIKQTHPDVFGTQELVSE QAAFLAEQLPDYRWFGQGRRGDDSDEHMGVFYDARVLEVVESGDFWLSDTPERAGSITWGNVLPRMATWALFERRSDKRR FYLFNTHFPYRDEDEPARERSARLILSRIAQLPATIPVVLTGDFNSDPDKITYPTLTAVLRDARAQASKRSGPENTFQDF TTHPTRRIDWILYRGLRPSRFATLDDRPGGILPSDHYPVMAEFEWPR
Sequences:
>Translated_287_residues MPRSIAQVLRCLLAIGALSCIALPALAGTPVAPLRVMSFNVRVPADTDGDKRWQVRRAAMVALIKQTHPDVFGTQELVSE QAAFLAEQLPDYRWFGQGRRGDDSDEHMGVFYDARVLEVVESGDFWLSDTPERAGSITWGNVLPRMATWALFERRSDKRR FYLFNTHFPYRDEDEPARERSARLILSRIAQLPATIPVVLTGDFNSDPDKITYPTLTAVLRDARAQASKRSGPENTFQDF TTHPTRRIDWILYRGLRPSRFATLDDRPGGILPSDHYPVMAEFEWPR >Mature_286_residues PRSIAQVLRCLLAIGALSCIALPALAGTPVAPLRVMSFNVRVPADTDGDKRWQVRRAAMVALIKQTHPDVFGTQELVSEQ AAFLAEQLPDYRWFGQGRRGDDSDEHMGVFYDARVLEVVESGDFWLSDTPERAGSITWGNVLPRMATWALFERRSDKRRF YLFNTHFPYRDEDEPARERSARLILSRIAQLPATIPVVLTGDFNSDPDKITYPTLTAVLRDARAQASKRSGPENTFQDFT THPTRRIDWILYRGLRPSRFATLDDRPGGILPSDHYPVMAEFEWPR
Specific function: Unknown
COG id: COG3568
COG function: function code R; Metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32633; Mature: 32502
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRSIAQVLRCLLAIGALSCIALPALAGTPVAPLRVMSFNVRVPADTDGDKRWQVRRAAM CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHH VALIKQTHPDVFGTQELVSEQAAFLAEQLPDYRWFGQGRRGDDSDEHMGVFYDARVLEVV HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCEEEEHHHHHHHH ESGDFWLSDTPERAGSITWGNVLPRMATWALFERRSDKRRFYLFNTHFPYRDEDEPARER HCCCEEECCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHH SARLILSRIAQLPATIPVVLTGDFNSDPDKITYPTLTAVLRDARAQASKRSGPENTFQDF HHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHH TTHPTRRIDWILYRGLRPSRFATLDDRPGGILPSDHYPVMAEFEWPR HCCCCHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCEEEEECCCC >Mature Secondary Structure PRSIAQVLRCLLAIGALSCIALPALAGTPVAPLRVMSFNVRVPADTDGDKRWQVRRAAM CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHH VALIKQTHPDVFGTQELVSEQAAFLAEQLPDYRWFGQGRRGDDSDEHMGVFYDARVLEVV HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCEEEEHHHHHHHH ESGDFWLSDTPERAGSITWGNVLPRMATWALFERRSDKRRFYLFNTHFPYRDEDEPARER HCCCEEECCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHH SARLILSRIAQLPATIPVVLTGDFNSDPDKITYPTLTAVLRDARAQASKRSGPENTFQDF HHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHH TTHPTRRIDWILYRGLRPSRFATLDDRPGGILPSDHYPVMAEFEWPR HCCCCHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA