| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241406
Identifier: 21241406
GI number: 21241406
Start: 749874
End: 750554
Strand: Direct
Name: 21241406
Synonym: XAC0635
Alternate gene names: NA
Gene position: 749874-750554 (Clockwise)
Preceding gene: 21241405
Following gene: 21241407
Centisome position: 14.49
GC content: 64.61
Gene sequence:
>681_bases GTGGAACCGATGAGCGAGAACACGGATAAATTCGGCGCGCACGAGGTGGCCACGTGGTTGCGACGTCACCCCACCTTCCT CAAGCAGTTCCCGGATCTGGCGGTGAGCTTGCTGGTGCCGCGCGACGACGGCCCCACCGCCTCGTTGGCCACCTACCAGC TGGAAGTACTACGCGACAAGAACCGCGAACTGTCGCGCCGCCTGCACGAGCTGGGCAGCAACGCGCAGGAAAACGAGCGG CTGGCAGTACGCACCCATCAACTCACGCTTGCGTTGATGCGCCAGACCAGCGCGGCCGACACGCTCAAGGCCATGGCCGC CTCGCTGGCAGAAGATTTCAACGGCGAACTGGTGCGGCTGGTGTTGCTCAAACCCATCGATGCGCTGGATGCGGACTGGC TGCAGATCATCGCAATCGACGATGCGCGGCTGGCGCCGTTCCGCGATTGCCTCAACGATGGCGAGCCCATCTGCGGCCGC CTGCAGGCTGAAAAACACGCGCTGCTTTACGGCGCACAGGCGGGGCAGGTGCAATCCACCGCGTTGCTGCCGCTGCCGGG CATCGGCCTGATCGCAGTGGGGAGCAGCGATGCCAACCGGTTCTATCCCGGCATGGGCACGCTGTTCCTGCGCATGATGG GCGAATCGCTGAGCGTGGCGTTGCAACGCTTCGACGTGTGA
Upstream 100 bases:
>100_bases TGCAGGTGTCCTTGCCCGGTGGCGAGTTACGCATTCGTTGGCCCGGCGACCAGGAGCAGGTGGTGATGTCCGGCCCGGCT GTGTTCGTCTTCGATGGAGA
Downstream 100 bases:
>100_bases GGCCGATGGCTGCGTCCATCGACGTTGGCGACATGGGGTCGTTGGCGATGGCGCTGCTTCCGCAGCGGGGAGGGCGAGGT GGTGGCAGTCGACTATCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MEPMSENTDKFGAHEVATWLRRHPTFLKQFPDLAVSLLVPRDDGPTASLATYQLEVLRDKNRELSRRLHELGSNAQENER LAVRTHQLTLALMRQTSAADTLKAMAASLAEDFNGELVRLVLLKPIDALDADWLQIIAIDDARLAPFRDCLNDGEPICGR LQAEKHALLYGAQAGQVQSTALLPLPGIGLIAVGSSDANRFYPGMGTLFLRMMGESLSVALQRFDV
Sequences:
>Translated_226_residues MEPMSENTDKFGAHEVATWLRRHPTFLKQFPDLAVSLLVPRDDGPTASLATYQLEVLRDKNRELSRRLHELGSNAQENER LAVRTHQLTLALMRQTSAADTLKAMAASLAEDFNGELVRLVLLKPIDALDADWLQIIAIDDARLAPFRDCLNDGEPICGR LQAEKHALLYGAQAGQVQSTALLPLPGIGLIAVGSSDANRFYPGMGTLFLRMMGESLSVALQRFDV >Mature_226_residues MEPMSENTDKFGAHEVATWLRRHPTFLKQFPDLAVSLLVPRDDGPTASLATYQLEVLRDKNRELSRRLHELGSNAQENER LAVRTHQLTLALMRQTSAADTLKAMAASLAEDFNGELVRLVLLKPIDALDADWLQIIAIDDARLAPFRDCLNDGEPICGR LQAEKHALLYGAQAGQVQSTALLPLPGIGLIAVGSSDANRFYPGMGTLFLRMMGESLSVALQRFDV
Specific function: Unknown
COG id: COG3159
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24920; Mature: 24920
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPMSENTDKFGAHEVATWLRRHPTFLKQFPDLAVSLLVPRDDGPTASLATYQLEVLRDK CCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHCC NRELSRRLHELGSNAQENERLAVRTHQLTLALMRQTSAADTLKAMAASLAEDFNGELVRL CHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE VLLKPIDALDADWLQIIAIDDARLAPFRDCLNDGEPICGRLQAEKHALLYGAQAGQVQST EECCCCCCCCCCEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHCCCCEEEECCCCCCCCE ALLPLPGIGLIAVGSSDANRFYPGMGTLFLRMMGESLSVALQRFDV EECCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEPMSENTDKFGAHEVATWLRRHPTFLKQFPDLAVSLLVPRDDGPTASLATYQLEVLRDK CCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHCC NRELSRRLHELGSNAQENERLAVRTHQLTLALMRQTSAADTLKAMAASLAEDFNGELVRL CHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE VLLKPIDALDADWLQIIAIDDARLAPFRDCLNDGEPICGRLQAEKHALLYGAQAGQVQST EECCCCCCCCCCEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHCCCCEEEECCCCCCCCE ALLPLPGIGLIAVGSSDANRFYPGMGTLFLRMMGESLSVALQRFDV EECCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA