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The map label for this gene is yccS [H]

Identifier: 21241281

GI number: 21241281

Start: 598191

End: 600404

Strand: Reverse

Name: yccS [H]

Synonym: XAC0510

Alternate gene names: 21241281

Gene position: 600404-598191 (Counterclockwise)

Preceding gene: 21241282

Following gene: 21241279

Centisome position: 11.6

GC content: 66.49

Gene sequence:

>2214_bases
GTGGCCACTCCCTCCTTCGAAACCCGCCTCAGCCGTTTGTGGGCCCATGAAAAGGCCAGCTATGGCCTGCGTGTGTTCAT
CGCGCTGGCGGTGGCGATGGGCGTGTGCTGGCACTGGCAACAGCTCACTGCGGTGCCGGCGCTGTTTCTGGGCGCCATTG
CCAGCGCCATTGCCGAAACCGACGACAACTGGCTGGGCCGCATCAAATCGGTGCTGCTCTCGCTGCTGTGTTTCGCCGCT
GCCGCAGCCGCAGTGGTGGTGCTGTTTCCGTACCCGCTGCCGTTCGTGCTGGGCATGGCGTTGGCCACGTTCTCGTTGAC
CCTGCTCGGTGCGCTGGGCGAGCGCTATGCCTCGATCGCGCAGGCCACGGTGGCCTTGTCGATCTACGCCATGATCGGCA
TGGACCAGCATGGCAGCCGCGATCCGCTGATCGCCTGGCACGGCGCGGCGCTGCTGCTGATCGGCGCCACCTGGTACGGC
GTGCTGTCGATCCTGTGGACCATCCTGTTCGCCAATCGCCCGGTGCGCGAGCGGCTGTCGCGGCTGTTTTTCGAATTGGG
CCGCTATCTCAAGCTCAAGGCCGATCTGTTCGAACCGGTGCGCCAGAGCGACCTGCATGCACGCCGGCTGGCCTTGGCCG
AACAGAACGCCAAGGTGGTCGGCGCGCTCAATGCGGCCAAGACCGCCATCATGAGCCGCTTCGGCCGCTCGGGGCGGCCG
GGCGTGCAATCGGGCCTGTATTTCCGCCTGTATTACATGGCGCAGGACTTCCATGAGCGCGCCAGTTCCTCGCACTATCC
TTACGAGGCGCTCACCGACGCGTTCTTCCACAGCGATGTGCTGTATCGCTGCCAGCGCCTGCTCGCCCTGCAAGGCAAGG
CGTGCGCGGCGTTGGGCGAGGCGATTCGCCTGCGCCATCCGTTCGATTACGGCGACAGCAGCCGCCTGGCCACCGAAGAC
CTGCGCCAATCGCTGGATTATCTGCACGCGCGCGCCGACCCCGCACTGGCCCGCCTGCTCGGCGCGCTGGAACTGCTGGT
GACCAACCTGCAGAGTATCGAACGCAGGTTGTCGGAAGCGGCGCAATCCGATTCCACCAGCGACAACCTCGACACCCGGC
TGCGCGATTCCTCGCCGCACACCTTGCGCGAAATGGGCGCGCGGCTGGTGCAGCAACTCACGCCCGGCTCGGTGCTGTTC
CGCCACGGCCTGCGCATGGCCATCGCGCTGCTGGTGGGCTACGCCATCATGCAATCCATCCATGCCGACAACGGGTACTG
GATCCTGCTCACCACCGCATTCGTGTGCCGGCCCAACTACGGCGCCACGCGCCTGCGGCTGGTGCAGCGCATTGCCGGCA
CCTTGATCGGCCTGGTCGCCACCTGGGCGCTGATGCAGCTGTTCCCCGGCACCGAGGTGCAACTGCTGCTGGCGCTGGCC
GGCGCGCTGGTGTTCTTCATCACCCGCACCGATCGCTACATGCTGGCCACCGCCGGCATCACGGTGATGGCGCTGTTCTG
CTTCAACCTGCTGGGCGATGGTTTCGTGCTGATCTGGCCGCGCCTGATCGACACCCTGATCGGTTGCGCGATTGCTGCGG
CCGCCTCGTTCCTGATCCTGCCGGACTGGCAGGGCCGCCGGCTGAACCAGGTAATGGCCACGGTGCTGGCCAGCTGCGCG
CGTTATCTGGCCCAGGTGCTGGAGCAGTACGCCAGCGGCAAGCGCGACGACCTGCCCTACCGCATTGCGCGCCGCGACAT
GCACAACGCCGATGCCGCGTTGTCGGTGGCGTTATCCAACATGCTGCGCGAACCCGGCCGCTATCGGCGCAATCTGGATG
CGGGCTTTCGCTTCCTGGCGCTGTCCAACACCTTGCTCGGCTATCTGTCGGCACTGGGCGCGCACCGCGCCGCGCTGGAG
GGCGAACACGATGCCACCATCGCGCAGGCTGGTGAGTATCTGCAGCGCGCACTGAGCGAGATCGCCAGCGCCCTTGGCCA
ACGCCAACCGCTGCCGACGCACGACGAAAGCGAAGAATTGGCCATCGCAGAAGAGCTGGAACACCATCCGGTGCAACTAC
CGCCCAAGCAACGCCTGGTGCGCGACCAACTGGCATTGACGCTGCGCCTGCTGCCCAAACTGCGCGCTGCGGCGTTGGCG
GTGACCACGGCGCCGGCAGAGAACGCGCCGCGTCTGGCGACGACCAAGGCCTAG

Upstream 100 bases:

>100_bases
TCCGCGCACATGCCGGCTACTGACAAAGAACTAGCCGCCGTCCACCCCGATGGCGCATGGCTGCGGCAATAATGCCCGGG
CTCCCTGCCTTGTAGAGACT

Downstream 100 bases:

>100_bases
AGCGTGTGATGCACTTTGACAGGACGCTTCGCACTCACCTCAAAGTACACAACACGCTCTAGCCGCCAGTGATCGACAGG
CGTGGGCGCCGCGGCCCATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 737; Mature: 736

Protein sequence:

>737_residues
MATPSFETRLSRLWAHEKASYGLRVFIALAVAMGVCWHWQQLTAVPALFLGAIASAIAETDDNWLGRIKSVLLSLLCFAA
AAAAVVVLFPYPLPFVLGMALATFSLTLLGALGERYASIAQATVALSIYAMIGMDQHGSRDPLIAWHGAALLLIGATWYG
VLSILWTILFANRPVRERLSRLFFELGRYLKLKADLFEPVRQSDLHARRLALAEQNAKVVGALNAAKTAIMSRFGRSGRP
GVQSGLYFRLYYMAQDFHERASSSHYPYEALTDAFFHSDVLYRCQRLLALQGKACAALGEAIRLRHPFDYGDSSRLATED
LRQSLDYLHARADPALARLLGALELLVTNLQSIERRLSEAAQSDSTSDNLDTRLRDSSPHTLREMGARLVQQLTPGSVLF
RHGLRMAIALLVGYAIMQSIHADNGYWILLTTAFVCRPNYGATRLRLVQRIAGTLIGLVATWALMQLFPGTEVQLLLALA
GALVFFITRTDRYMLATAGITVMALFCFNLLGDGFVLIWPRLIDTLIGCAIAAAASFLILPDWQGRRLNQVMATVLASCA
RYLAQVLEQYASGKRDDLPYRIARRDMHNADAALSVALSNMLREPGRYRRNLDAGFRFLALSNTLLGYLSALGAHRAALE
GEHDATIAQAGEYLQRALSEIASALGQRQPLPTHDESEELAIAEELEHHPVQLPPKQRLVRDQLALTLRLLPKLRAAALA
VTTAPAENAPRLATTKA

Sequences:

>Translated_737_residues
MATPSFETRLSRLWAHEKASYGLRVFIALAVAMGVCWHWQQLTAVPALFLGAIASAIAETDDNWLGRIKSVLLSLLCFAA
AAAAVVVLFPYPLPFVLGMALATFSLTLLGALGERYASIAQATVALSIYAMIGMDQHGSRDPLIAWHGAALLLIGATWYG
VLSILWTILFANRPVRERLSRLFFELGRYLKLKADLFEPVRQSDLHARRLALAEQNAKVVGALNAAKTAIMSRFGRSGRP
GVQSGLYFRLYYMAQDFHERASSSHYPYEALTDAFFHSDVLYRCQRLLALQGKACAALGEAIRLRHPFDYGDSSRLATED
LRQSLDYLHARADPALARLLGALELLVTNLQSIERRLSEAAQSDSTSDNLDTRLRDSSPHTLREMGARLVQQLTPGSVLF
RHGLRMAIALLVGYAIMQSIHADNGYWILLTTAFVCRPNYGATRLRLVQRIAGTLIGLVATWALMQLFPGTEVQLLLALA
GALVFFITRTDRYMLATAGITVMALFCFNLLGDGFVLIWPRLIDTLIGCAIAAAASFLILPDWQGRRLNQVMATVLASCA
RYLAQVLEQYASGKRDDLPYRIARRDMHNADAALSVALSNMLREPGRYRRNLDAGFRFLALSNTLLGYLSALGAHRAALE
GEHDATIAQAGEYLQRALSEIASALGQRQPLPTHDESEELAIAEELEHHPVQLPPKQRLVRDQLALTLRLLPKLRAAALA
VTTAPAENAPRLATTKA
>Mature_736_residues
ATPSFETRLSRLWAHEKASYGLRVFIALAVAMGVCWHWQQLTAVPALFLGAIASAIAETDDNWLGRIKSVLLSLLCFAAA
AAAVVVLFPYPLPFVLGMALATFSLTLLGALGERYASIAQATVALSIYAMIGMDQHGSRDPLIAWHGAALLLIGATWYGV
LSILWTILFANRPVRERLSRLFFELGRYLKLKADLFEPVRQSDLHARRLALAEQNAKVVGALNAAKTAIMSRFGRSGRPG
VQSGLYFRLYYMAQDFHERASSSHYPYEALTDAFFHSDVLYRCQRLLALQGKACAALGEAIRLRHPFDYGDSSRLATEDL
RQSLDYLHARADPALARLLGALELLVTNLQSIERRLSEAAQSDSTSDNLDTRLRDSSPHTLREMGARLVQQLTPGSVLFR
HGLRMAIALLVGYAIMQSIHADNGYWILLTTAFVCRPNYGATRLRLVQRIAGTLIGLVATWALMQLFPGTEVQLLLALAG
ALVFFITRTDRYMLATAGITVMALFCFNLLGDGFVLIWPRLIDTLIGCAIAAAASFLILPDWQGRRLNQVMATVLASCAR
YLAQVLEQYASGKRDDLPYRIARRDMHNADAALSVALSNMLREPGRYRRNLDAGFRFLALSNTLLGYLSALGAHRAALEG
EHDATIAQAGEYLQRALSEIASALGQRQPLPTHDESEELAIAEELEHHPVQLPPKQRLVRDQLALTLRLLPKLRAAALAV
TTAPAENAPRLATTKA

Specific function: Unknown

COG id: COG1289

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yccS/yhfK family [H]

Homologues:

Organism=Escherichia coli, GI87081808, Length=718, Percent_Identity=39.8328690807799, Blast_Score=459, Evalue=1e-130,
Organism=Escherichia coli, GI87082248, Length=662, Percent_Identity=24.3202416918429, Blast_Score=103, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010019
- InterPro:   IPR010020 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81153; Mature: 81022

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATPSFETRLSRLWAHEKASYGLRVFIALAVAMGVCWHWQQLTAVPALFLGAIASAIAET
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DDNWLGRIKSVLLSLLCFAAAAAAVVVLFPYPLPFVLGMALATFSLTLLGALGERYASIA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QATVALSIYAMIGMDQHGSRDPLIAWHGAALLLIGATWYGVLSILWTILFANRPVRERLS
HHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
RLFFELGRYLKLKADLFEPVRQSDLHARRLALAEQNAKVVGALNAAKTAIMSRFGRSGRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC
GVQSGLYFRLYYMAQDFHERASSSHYPYEALTDAFFHSDVLYRCQRLLALQGKACAALGE
CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
AIRLRHPFDYGDSSRLATEDLRQSLDYLHARADPALARLLGALELLVTNLQSIERRLSEA
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQSDSTSDNLDTRLRDSSPHTLREMGARLVQQLTPGSVLFRHGLRMAIALLVGYAIMQSI
HHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
HADNGYWILLTTAFVCRPNYGATRLRLVQRIAGTLIGLVATWALMQLFPGTEVQLLLALA
HCCCCEEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
GALVFFITRTDRYMLATAGITVMALFCFNLLGDGFVLIWPRLIDTLIGCAIAAAASFLIL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHEEC
PDWQGRRLNQVMATVLASCARYLAQVLEQYASGKRDDLPYRIARRDMHNADAALSVALSN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHH
MLREPGRYRRNLDAGFRFLALSNTLLGYLSALGAHRAALEGEHDATIAQAGEYLQRALSE
HHHCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
IASALGQRQPLPTHDESEELAIAEELEHHPVQLPPKQRLVRDQLALTLRLLPKLRAAALA
HHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VTTAPAENAPRLATTKA
EEECCCCCCCCCCCCCC
>Mature Secondary Structure 
ATPSFETRLSRLWAHEKASYGLRVFIALAVAMGVCWHWQQLTAVPALFLGAIASAIAET
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DDNWLGRIKSVLLSLLCFAAAAAAVVVLFPYPLPFVLGMALATFSLTLLGALGERYASIA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QATVALSIYAMIGMDQHGSRDPLIAWHGAALLLIGATWYGVLSILWTILFANRPVRERLS
HHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
RLFFELGRYLKLKADLFEPVRQSDLHARRLALAEQNAKVVGALNAAKTAIMSRFGRSGRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC
GVQSGLYFRLYYMAQDFHERASSSHYPYEALTDAFFHSDVLYRCQRLLALQGKACAALGE
CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
AIRLRHPFDYGDSSRLATEDLRQSLDYLHARADPALARLLGALELLVTNLQSIERRLSEA
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQSDSTSDNLDTRLRDSSPHTLREMGARLVQQLTPGSVLFRHGLRMAIALLVGYAIMQSI
HHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
HADNGYWILLTTAFVCRPNYGATRLRLVQRIAGTLIGLVATWALMQLFPGTEVQLLLALA
HCCCCEEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
GALVFFITRTDRYMLATAGITVMALFCFNLLGDGFVLIWPRLIDTLIGCAIAAAASFLIL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHEEC
PDWQGRRLNQVMATVLASCARYLAQVLEQYASGKRDDLPYRIARRDMHNADAALSVALSN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHH
MLREPGRYRRNLDAGFRFLALSNTLLGYLSALGAHRAALEGEHDATIAQAGEYLQRALSE
HHHCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
IASALGQRQPLPTHDESEELAIAEELEHHPVQLPPKQRLVRDQLALTLRLLPKLRAAALA
HHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VTTAPAENAPRLATTKA
EEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]