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The map label for this gene is hrcN [H]

Identifier: 21241185

GI number: 21241185

Start: 481704

End: 483032

Strand: Direct

Name: hrcN [H]

Synonym: XAC0412

Alternate gene names: 21241185

Gene position: 481704-483032 (Clockwise)

Preceding gene: 21241184

Following gene: 21241186

Centisome position: 9.31

GC content: 67.19

Gene sequence:

>1329_bases
ATGCTGGCTGAGATGCCCCTGCTGGAGACAGCGCTCGAGCGCGAGCTGGCCACGCTCGCGTTCGGTCGTCGCTATGGCAA
GGTGGTCGAACTCGTCGGCACCATGCTCAAGGTGGCCGGCGTGCAGGTCAGCCTGGGCGAGGTCTGCGAGTTGCGCCAAC
GCGATGGCACCTTGTTGCAGCGTGCCGAAGTGGTGGGCTTCAGCCGCGATCTCGCATTGCTGGCGCCGTTCGGGGAGCTG
GTCGGGCTGTCGCGCGAGACGCGCGTGATCGGATTGGGGCGCCCGTTGGCGGTGCCTGTTGGACCGGCCTTGCTGGGGCG
CGTGCTCGACGGCTTGGGCGAGCCGTCGGACGGGCAAGGAGCAATCGCCTGCGACACCTGGGTACCGATCCAGGCGCAGG
CACCGGACCCGATGCGTCGGCGGCTGATTGAACAACCCATGCCGACCGGCGTGCGGATCGTGGATGGCCTGATGACGCTG
GGCGAGGGCCAACGCATGGGCATCTTCGCCGCAGCAGGCGTCGGCAAGAGCACCTTGATGGGAATGTTCGCGCGCGGTAC
CCAGTGCGATGTCAACGTGATCGTGCTGATCGGCGAGCGCGGACGCGAGGTGCGGGAGTTCATCGAGCTCATTCTTGGCG
CCGATGGGCTGGCGCGCAGCGTCGTGGTGTGTGCAACCTCCGATCGCTCGTCGATCGAGCGCGCGAAGGCCGCTTACGTC
GGCACCGCCATCGCCGAGTATTTCCGGGATCGGGGCCTGCGCGTTCTGCTGATGATGGACTCGCTGACGCGCTTTGCCCG
CGCGCAACGCGAGATCGGTCTGGCCGCCGGCGAGCCCCCCACGCGCAGGGGCTTTCCGCCATCGGTGTTCGCCGAGTTGC
CGCGCCTGCTCGAACGCGCGGGCATGGGCGAGAGCGGGTCGATCACCGCGTTCTACACCGTCCTGGCCGAGGACGACACC
GGCAGCGACCCGATCGCCGAAGAAGTGCGCGGCATCCTCGATGGGCACCTGATTCTCTCCCGCGAGATCGCGGCCAAGAA
CCAGTACCCGGCAATCGACGTGTTGGCCAGCCTGAGCCGGGTGATGAGCCAGATCGTCCCATCGGACCACTCCCAGGCCG
CCGGCCGGTTGCGGCGCCTGCTCGCCAAGTACAACGAGGTGGAAACCCTGGTGCAGGTGGGCGAATACCGTCAGGGAAGC
GATGCCGTTGCCGACGAAGCGATCGACAGGATCGATGCGATCCGCGACTTTCTCAGCCAACCGACCGACCGGCTCAGTGC
GTACGAAAGTACGCTGGAGCAGCTGGCCAGCGTGACCGACGATGCGTGA

Upstream 100 bases:

>100_bases
GAGTGGGATACGGGAGTGTTCGAGACCGATCTGCGCGACCAGCTGCGCAGTCTGCGGCGCGTCATTCGCCGCGTGTTGGC
CGCACCCCAGGAGCCCGTGG

Downstream 100 bases:

>100_bases
GCCTGCCCACACCTGGTCGGTGCTGCATCAGCTCAAGGCGCGTCGCTGCGAGCGCATGCAGGAACGTTCGAGCGATTGCA
GGCGTGCATTGGAACACTGC

Product: type III secretion system ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MLAEMPLLETALERELATLAFGRRYGKVVELVGTMLKVAGVQVSLGEVCELRQRDGTLLQRAEVVGFSRDLALLAPFGEL
VGLSRETRVIGLGRPLAVPVGPALLGRVLDGLGEPSDGQGAIACDTWVPIQAQAPDPMRRRLIEQPMPTGVRIVDGLMTL
GEGQRMGIFAAAGVGKSTLMGMFARGTQCDVNVIVLIGERGREVREFIELILGADGLARSVVVCATSDRSSIERAKAAYV
GTAIAEYFRDRGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAGMGESGSITAFYTVLAEDDT
GSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLASLSRVMSQIVPSDHSQAAGRLRRLLAKYNEVETLVQVGEYRQGS
DAVADEAIDRIDAIRDFLSQPTDRLSAYESTLEQLASVTDDA

Sequences:

>Translated_442_residues
MLAEMPLLETALERELATLAFGRRYGKVVELVGTMLKVAGVQVSLGEVCELRQRDGTLLQRAEVVGFSRDLALLAPFGEL
VGLSRETRVIGLGRPLAVPVGPALLGRVLDGLGEPSDGQGAIACDTWVPIQAQAPDPMRRRLIEQPMPTGVRIVDGLMTL
GEGQRMGIFAAAGVGKSTLMGMFARGTQCDVNVIVLIGERGREVREFIELILGADGLARSVVVCATSDRSSIERAKAAYV
GTAIAEYFRDRGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAGMGESGSITAFYTVLAEDDT
GSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLASLSRVMSQIVPSDHSQAAGRLRRLLAKYNEVETLVQVGEYRQGS
DAVADEAIDRIDAIRDFLSQPTDRLSAYESTLEQLASVTDDA
>Mature_442_residues
MLAEMPLLETALERELATLAFGRRYGKVVELVGTMLKVAGVQVSLGEVCELRQRDGTLLQRAEVVGFSRDLALLAPFGEL
VGLSRETRVIGLGRPLAVPVGPALLGRVLDGLGEPSDGQGAIACDTWVPIQAQAPDPMRRRLIEQPMPTGVRIVDGLMTL
GEGQRMGIFAAAGVGKSTLMGMFARGTQCDVNVIVLIGERGREVREFIELILGADGLARSVVVCATSDRSSIERAKAAYV
GTAIAEYFRDRGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAGMGESGSITAFYTVLAEDDT
GSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLASLSRVMSQIVPSDHSQAAGRLRRLLAKYNEVETLVQVGEYRQGS
DAVADEAIDRIDAIRDFLSQPTDRLSAYESTLEQLASVTDDA

Specific function: Necessary for both basic pathogenicity and the induction of the hypersensitive response in resistant plants. May function as an ATPase that is related to a transport apparatus rather than as part of a proton pump [H]

COG id: COG1157

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway ATPase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family [H]

Homologues:

Organism=Homo sapiens, GI32189394, Length=354, Percent_Identity=32.7683615819209, Blast_Score=176, Evalue=3e-44,
Organism=Homo sapiens, GI50345984, Length=311, Percent_Identity=34.4051446945338, Blast_Score=152, Evalue=7e-37,
Organism=Homo sapiens, GI4757810, Length=311, Percent_Identity=34.4051446945338, Blast_Score=152, Evalue=7e-37,
Organism=Homo sapiens, GI19913428, Length=410, Percent_Identity=25.609756097561, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI19913426, Length=436, Percent_Identity=25.4587155963303, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI19913424, Length=336, Percent_Identity=28.5714285714286, Blast_Score=114, Evalue=1e-25,
Organism=Escherichia coli, GI1788251, Length=438, Percent_Identity=46.1187214611872, Blast_Score=345, Evalue=3e-96,
Organism=Escherichia coli, GI1790170, Length=409, Percent_Identity=30.0733496332518, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI1790172, Length=348, Percent_Identity=31.6091954022989, Blast_Score=154, Evalue=1e-38,
Organism=Escherichia coli, GI1790217, Length=288, Percent_Identity=27.7777777777778, Blast_Score=75, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI25144756, Length=354, Percent_Identity=31.638418079096, Blast_Score=162, Evalue=4e-40,
Organism=Caenorhabditis elegans, GI71988080, Length=314, Percent_Identity=34.3949044585987, Blast_Score=150, Evalue=1e-36,
Organism=Caenorhabditis elegans, GI71988063, Length=314, Percent_Identity=34.3949044585987, Blast_Score=150, Evalue=1e-36,
Organism=Caenorhabditis elegans, GI71988074, Length=300, Percent_Identity=32.6666666666667, Blast_Score=132, Evalue=5e-31,
Organism=Caenorhabditis elegans, GI17510931, Length=391, Percent_Identity=25.3196930946292, Blast_Score=119, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17570191, Length=400, Percent_Identity=24.75, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17565854, Length=336, Percent_Identity=28.5714285714286, Blast_Score=116, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6322581, Length=437, Percent_Identity=30.4347826086957, Blast_Score=164, Evalue=3e-41,
Organism=Saccharomyces cerevisiae, GI6319370, Length=316, Percent_Identity=34.8101265822785, Blast_Score=162, Evalue=1e-40,
Organism=Saccharomyces cerevisiae, GI6319603, Length=385, Percent_Identity=26.7532467532467, Blast_Score=128, Evalue=2e-30,
Organism=Saccharomyces cerevisiae, GI6320016, Length=254, Percent_Identity=29.9212598425197, Blast_Score=96, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24638766, Length=354, Percent_Identity=31.3559322033898, Blast_Score=167, Evalue=2e-41,
Organism=Drosophila melanogaster, GI24658560, Length=315, Percent_Identity=34.6031746031746, Blast_Score=150, Evalue=1e-36,
Organism=Drosophila melanogaster, GI28574560, Length=354, Percent_Identity=31.3559322033898, Blast_Score=150, Evalue=1e-36,
Organism=Drosophila melanogaster, GI281361666, Length=374, Percent_Identity=26.4705882352941, Blast_Score=121, Evalue=8e-28,
Organism=Drosophila melanogaster, GI24646341, Length=374, Percent_Identity=26.4705882352941, Blast_Score=121, Evalue=8e-28,
Organism=Drosophila melanogaster, GI17136796, Length=374, Percent_Identity=26.4705882352941, Blast_Score=121, Evalue=8e-28,
Organism=Drosophila melanogaster, GI24583992, Length=334, Percent_Identity=28.7425149700599, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24583988, Length=245, Percent_Identity=32.2448979591837, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24583986, Length=245, Percent_Identity=32.2448979591837, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24583984, Length=245, Percent_Identity=32.2448979591837, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI20129479, Length=274, Percent_Identity=28.8321167883212, Blast_Score=108, Evalue=1e-23,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR003593
- InterPro:   IPR004100
- InterPro:   IPR005714
- InterPro:   IPR013380 [H]

Pfam domain/function: PF00006 ATP-synt_ab; PF02874 ATP-synt_ab_N [H]

EC number: =3.6.3.14 [H]

Molecular weight: Translated: 47660; Mature: 47660

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAEMPLLETALERELATLAFGRRYGKVVELVGTMLKVAGVQVSLGEVCELRQRDGTLLQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHH
RAEVVGFSRDLALLAPFGELVGLSRETRVIGLGRPLAVPVGPALLGRVLDGLGEPSDGQG
HHHHHCCCCCHHHHCCHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCC
AIACDTWVPIQAQAPDPMRRRLIEQPMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLM
CEEECCCCEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHH
GMFARGTQCDVNVIVLIGERGREVREFIELILGADGLARSVVVCATSDRSSIERAKAAYV
HHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCHHCEEEEEECCCHHHHHHHHHHHH
GTAIAEYFRDRGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERA
HHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHC
GMGESGSITAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLASLSR
CCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHH
VMSQIVPSDHSQAAGRLRRLLAKYNEVETLVQVGEYRQGSDAVADEAIDRIDAIRDFLSQ
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC
PTDRLSAYESTLEQLASVTDDA
CHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLAEMPLLETALERELATLAFGRRYGKVVELVGTMLKVAGVQVSLGEVCELRQRDGTLLQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHH
RAEVVGFSRDLALLAPFGELVGLSRETRVIGLGRPLAVPVGPALLGRVLDGLGEPSDGQG
HHHHHCCCCCHHHHCCHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCC
AIACDTWVPIQAQAPDPMRRRLIEQPMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLM
CEEECCCCEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHH
GMFARGTQCDVNVIVLIGERGREVREFIELILGADGLARSVVVCATSDRSSIERAKAAYV
HHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCHHCEEEEEECCCHHHHHHHHHHHH
GTAIAEYFRDRGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERA
HHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHC
GMGESGSITAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLASLSR
CCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHH
VMSQIVPSDHSQAAGRLRRLLAKYNEVETLVQVGEYRQGSDAVADEAIDRIDAIRDFLSQ
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC
PTDRLSAYESTLEQLASVTDDA
CHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1472717 [H]