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The map label for this gene is hrpB5

Identifier: 21241184

GI number: 21241184

Start: 481013

End: 481714

Strand: Direct

Name: hrpB5

Synonym: XAC0411

Alternate gene names: NA

Gene position: 481013-481714 (Clockwise)

Preceding gene: 21241183

Following gene: 21241185

Centisome position: 9.29

GC content: 69.23

Gene sequence:

>702_bases
ATGCGTCTCTGGTTGAGGTCAACGCCCGATGCCATCGGCCTGGATTGCGATGTCATTCCGCGCGAGGCGCTGGCCTCGGT
GCTGGCGCTGGATGCTGCCACTGCCGAGGTGCACGCACGCTGCGAGCAGGCCCTGAGCCAGGCGCAGACACGTGCACAGA
CGCTGATCGACGAGGCTCAACAGCAGGCCGAGGCGATCCTTCACGATGCGCGCCAAAAGGCCGAGCGCAGCGCACGCCTG
GGATATGCAACCGGGCTGCGACGTCAGCTTGATGAGTGGAACGAATCCGGCCTGCGCCATGCCTTTGCCGCCGACACGGC
CGCGCAGCGGGCACGCGAGCGCCTGGCTGAGATTGTCGCGCGCACCTGCGAGCACATCATCCTCGGACACGACCCTGCGG
CGCTGTATGCGCGTGCGGCGCAGGCCTTGGAAGGTGCCCTGGACGAGGCCAAGGCCCTGCGCGTGAGCGTGCACCCCGAC
GCGGTGGACGCTGCGCGGCGCGCCTTCGACGCGACCGCCACCGAGGCGGGCTGGACCCTGCAGGTAGAGCTGTGCGGCGA
TGCCGATCTGGCCGTGGGCGCCTGCGTGTGCGAGTGGGATACGGGAGTGTTCGAGACCGATCTGCGCGACCAGCTGCGCA
GTCTGCGGCGCGTCATTCGCCGCGTGTTGGCCGCACCCCAGGAGCCCGTGGATGCTGGCTGA

Upstream 100 bases:

>100_bases
TGTCCTTGCCCCTGGGCGCCGCGCAGGTGGCGGCTCTCGCAGCAGACGGTGCGAGCGATGCATTCCTGGCCGCGCTTCCT
ACCCTGATGCCGGAGGCGTC

Downstream 100 bases:

>100_bases
GATGCCCCTGCTGGAGACAGCGCTCGAGCGCGAGCTGGCCACGCTCGCGTTCGGTCGTCGCTATGGCAAGGTGGTCGAAC
TCGTCGGCACCATGCTCAAG

Product: type III secretion system protein HrpB

Products: NA

Alternate protein names: HrpE/YscL Family Type III Secretion Apparatus Protein; Flagellar Biosynthesis/Type III Secretory Pathway Protein

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MRLWLRSTPDAIGLDCDVIPREALASVLALDAATAEVHARCEQALSQAQTRAQTLIDEAQQQAEAILHDARQKAERSARL
GYATGLRRQLDEWNESGLRHAFAADTAAQRARERLAEIVARTCEHIILGHDPAALYARAAQALEGALDEAKALRVSVHPD
AVDAARRAFDATATEAGWTLQVELCGDADLAVGACVCEWDTGVFETDLRDQLRSLRRVIRRVLAAPQEPVDAG

Sequences:

>Translated_233_residues
MRLWLRSTPDAIGLDCDVIPREALASVLALDAATAEVHARCEQALSQAQTRAQTLIDEAQQQAEAILHDARQKAERSARL
GYATGLRRQLDEWNESGLRHAFAADTAAQRARERLAEIVARTCEHIILGHDPAALYARAAQALEGALDEAKALRVSVHPD
AVDAARRAFDATATEAGWTLQVELCGDADLAVGACVCEWDTGVFETDLRDQLRSLRRVIRRVLAAPQEPVDAG
>Mature_233_residues
MRLWLRSTPDAIGLDCDVIPREALASVLALDAATAEVHARCEQALSQAQTRAQTLIDEAQQQAEAILHDARQKAERSARL
GYATGLRRQLDEWNESGLRHAFAADTAAQRARERLAEIVARTCEHIILGHDPAALYARAAQALEGALDEAKALRVSVHPD
AVDAARRAFDATATEAGWTLQVELCGDADLAVGACVCEWDTGVFETDLRDQLRSLRRVIRRVLAAPQEPVDAG

Specific function: Unknown

COG id: COG1317

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25364; Mature: 25364

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLWLRSTPDAIGLDCDVIPREALASVLALDAATAEVHARCEQALSQAQTRAQTLIDEAQ
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQAEAILHDARQKAERSARLGYATGLRRQLDEWNESGLRHAFAADTAAQRARERLAEIVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTCEHIILGHDPAALYARAAQALEGALDEAKALRVSVHPDAVDAARRAFDATATEAGWTL
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHCCCCCCCCEE
QVELCGDADLAVGACVCEWDTGVFETDLRDQLRSLRRVIRRVLAAPQEPVDAG
EEEECCCCCHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRLWLRSTPDAIGLDCDVIPREALASVLALDAATAEVHARCEQALSQAQTRAQTLIDEAQ
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQAEAILHDARQKAERSARLGYATGLRRQLDEWNESGLRHAFAADTAAQRARERLAEIVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTCEHIILGHDPAALYARAAQALEGALDEAKALRVSVHPDAVDAARRAFDATATEAGWTL
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHCCCCCCCCEE
QVELCGDADLAVGACVCEWDTGVFETDLRDQLRSLRRVIRRVLAAPQEPVDAG
EEEECCCCCHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA