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The map label for this gene is hrcV [H]

Identifier: 21241178

GI number: 21241178

Start: 475529

End: 477466

Strand: Reverse

Name: hrcV [H]

Synonym: XAC0405

Alternate gene names: 21241178

Gene position: 477466-475529 (Counterclockwise)

Preceding gene: 21241179

Following gene: 21241177

Centisome position: 9.23

GC content: 61.76

Gene sequence:

>1938_bases
ATGCTAGGAGATCGCGTGCGAGCGACAAGGTATTTCGCTTACAGCGGCGAAGTCGCCATCGCCGCCTTGGTGGTGGCGGT
CATCGGGCTGATGATCCTGCCGCTGCCAACGCCGCTGATCGATACGCTGCTGGGCATCAACATCACCCTGAGCGTGGTGC
TGTTGATGGTCACGATGTATGTGCCCGACTCGATCTCGCTCTCGTCGTTTCCTTCCCTGCTGCTGTTCACCACACTGCTG
CGGTTATCCTTGAATATCGCCTCGACGAAGTCGATTCTGCTGCACGCCGAGGCGGGCCATATTATCGAGAGCTTTGGCGA
GTTGGTGGTCGGCGGCAATCTGGTGGTAGGCCTGGTCGTTTTCTTGATCATCACCACCGTGCAGTTCATCGTGATCGCAA
AGGGCTCCGAACGCGTTGCCGAGGTCGGTGCACGCTTCACGTTGGACGCAATGCCCGGTAAGCAGATGAGTATCGATGCC
GACCTGCGCGGCGGCAACCTGACCGCAGATGAAGCACGCCGCAAACGCGCACGGCTGGCCATGGAAAGCCAACTGCACGG
CGGCATGGACGGCGCCATGAAATTCGTCAAGGGTGATGCGATCGCCGGCCTGGTAATTACCATGGTCAACATCCTGGCCG
GCATCGTGGTCGGCGTGACGTACCACGGCATGACCGCGGGCGAAGCGGCCAACCGCTTTGCGATCCTGTCGGTGGGCGAT
GCCATGGTGTCGCAGATCGCCTCACTGCTGATATCGGTGGCTGCCGGCGTCATGATCACCCGCGTGGCCAACGAGAACGA
GACAAGGCTCAGCTCGCTCGGGCTCGATATCGGCCGTCAGCTCACCAGCAATGCGCGCGCCCTGATGGCAGCGAGCGTGC
TGCTGGCCTGCTTTGCGTTCGTCCCTGGATTCCCGGCCGTGCTGTTCCTGCTGCTGGCAGCGGCCGTCGGCGCCGGCGGC
TATACGATCTGGCGCAAGCAACGCGATATCAGCGGCACCGATCAGCGCAAACTGCCTTCGACGAGCCGTAAAGGCGCCAA
GGGCGAGGCGCCACATATTCGCAAAAACGCCCCTGATTTCGCCTCACCCCTGTCGATGCGTCTGTCGCCGCAGCTGGCCA
ATCTGCTCGACCCCGCGCGGCTTGATCAGGCGATCGAAAGCGAGCGCCGCAAGTTGGTCGAGTTGCTGGGCTTGCCGTTT
CCCGGAATCGCGATATGGCAGAGCGAGTCCCTGCAGGACATGCAATACGAGGTGTTGATTCACGATGTCCCCGAGACACG
CGCCGAATTGGGGGACACCGACGACATGCAAGCGGCGCTGGCCCGCCAGGCCATCGCACCCCTGCACGCGCGCGCGCACC
TGTTCGTCGGCATCCAGGAAACCCAGTGGATGCTGGAGCAGGTGGCTGTGGACTATCCCGGGCTGGTTGCGGAGGTCAAC
AAGGCGATGCCCGCACAACGCATTGCCGATGTGTTGCGGCGTCTGCTGGAAGAAAGGATTCCGGTGCGCAATATCAAGAG
CATTCTGGAGAGTCTGGTGGTATGGGGTCCGAAGGAAAAGGACCTTCTGATGTTGACCGAATATGTGCGCTGCGATCTCA
GCCGTTATCTTGCGCATACCGCAACCGCAGGCACCGGGCAGCTGCCTGCGGTGATGCTCGACCATGCTGTGGAACAAATG
ATCAGGCAATCCATTCGCGCGACCGCGGCCGGCAATTTCCTGGCCCTTCCGCCCGAGCAGGCGAACCAGCTTGTCGAACA
GGTGGAACGCATCGTGGGCGACCAGGCGCAGCATCCGCTGGCGGTGGTCGCATCGATGGACGTACGCCGCTATGTGCGCC
GCATGATCGAAGCACGGCTGACGTGGCTGCAGGTTTATTCGTTCCAGGAACTGGGTTCGGAGGTGCAGTTACAGCCGATC
GGCAGGGTGGTGGTGTGA

Upstream 100 bases:

>100_bases
GCGACGCAGTGCCCGAACCACTGTTCGAAACGGTTGCAGTGGTGTTGCGCTGGGTCGATGAACTCGGTCGCGACCACAGC
GACGGCGATGGAGCTCTGCC

Downstream 100 bases:

>100_bases
TGCGCAAGCCGCCCCTCCGCCATGTGCGCATCCTGCCGGTCAGCGGCGCACTGCAGCGGCAGGCGGCTCCTGCCACGCCG
GCCCGGTCGGCGCAGCGCTC

Product: HrcV protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 645; Mature: 645

Protein sequence:

>645_residues
MLGDRVRATRYFAYSGEVAIAALVVAVIGLMILPLPTPLIDTLLGINITLSVVLLMVTMYVPDSISLSSFPSLLLFTTLL
RLSLNIASTKSILLHAEAGHIIESFGELVVGGNLVVGLVVFLIITTVQFIVIAKGSERVAEVGARFTLDAMPGKQMSIDA
DLRGGNLTADEARRKRARLAMESQLHGGMDGAMKFVKGDAIAGLVITMVNILAGIVVGVTYHGMTAGEAANRFAILSVGD
AMVSQIASLLISVAAGVMITRVANENETRLSSLGLDIGRQLTSNARALMAASVLLACFAFVPGFPAVLFLLLAAAVGAGG
YTIWRKQRDISGTDQRKLPSTSRKGAKGEAPHIRKNAPDFASPLSMRLSPQLANLLDPARLDQAIESERRKLVELLGLPF
PGIAIWQSESLQDMQYEVLIHDVPETRAELGDTDDMQAALARQAIAPLHARAHLFVGIQETQWMLEQVAVDYPGLVAEVN
KAMPAQRIADVLRRLLEERIPVRNIKSILESLVVWGPKEKDLLMLTEYVRCDLSRYLAHTATAGTGQLPAVMLDHAVEQM
IRQSIRATAAGNFLALPPEQANQLVEQVERIVGDQAQHPLAVVASMDVRRYVRRMIEARLTWLQVYSFQELGSEVQLQPI
GRVVV

Sequences:

>Translated_645_residues
MLGDRVRATRYFAYSGEVAIAALVVAVIGLMILPLPTPLIDTLLGINITLSVVLLMVTMYVPDSISLSSFPSLLLFTTLL
RLSLNIASTKSILLHAEAGHIIESFGELVVGGNLVVGLVVFLIITTVQFIVIAKGSERVAEVGARFTLDAMPGKQMSIDA
DLRGGNLTADEARRKRARLAMESQLHGGMDGAMKFVKGDAIAGLVITMVNILAGIVVGVTYHGMTAGEAANRFAILSVGD
AMVSQIASLLISVAAGVMITRVANENETRLSSLGLDIGRQLTSNARALMAASVLLACFAFVPGFPAVLFLLLAAAVGAGG
YTIWRKQRDISGTDQRKLPSTSRKGAKGEAPHIRKNAPDFASPLSMRLSPQLANLLDPARLDQAIESERRKLVELLGLPF
PGIAIWQSESLQDMQYEVLIHDVPETRAELGDTDDMQAALARQAIAPLHARAHLFVGIQETQWMLEQVAVDYPGLVAEVN
KAMPAQRIADVLRRLLEERIPVRNIKSILESLVVWGPKEKDLLMLTEYVRCDLSRYLAHTATAGTGQLPAVMLDHAVEQM
IRQSIRATAAGNFLALPPEQANQLVEQVERIVGDQAQHPLAVVASMDVRRYVRRMIEARLTWLQVYSFQELGSEVQLQPI
GRVVV
>Mature_645_residues
MLGDRVRATRYFAYSGEVAIAALVVAVIGLMILPLPTPLIDTLLGINITLSVVLLMVTMYVPDSISLSSFPSLLLFTTLL
RLSLNIASTKSILLHAEAGHIIESFGELVVGGNLVVGLVVFLIITTVQFIVIAKGSERVAEVGARFTLDAMPGKQMSIDA
DLRGGNLTADEARRKRARLAMESQLHGGMDGAMKFVKGDAIAGLVITMVNILAGIVVGVTYHGMTAGEAANRFAILSVGD
AMVSQIASLLISVAAGVMITRVANENETRLSSLGLDIGRQLTSNARALMAASVLLACFAFVPGFPAVLFLLLAAAVGAGG
YTIWRKQRDISGTDQRKLPSTSRKGAKGEAPHIRKNAPDFASPLSMRLSPQLANLLDPARLDQAIESERRKLVELLGLPF
PGIAIWQSESLQDMQYEVLIHDVPETRAELGDTDDMQAALARQAIAPLHARAHLFVGIQETQWMLEQVAVDYPGLVAEVN
KAMPAQRIADVLRRLLEERIPVRNIKSILESLVVWGPKEKDLLMLTEYVRCDLSRYLAHTATAGTGQLPAVMLDHAVEQM
IRQSIRATAAGNFLALPPEQANQLVEQVERIVGDQAQHPLAVVASMDVRRYVRRMIEARLTWLQVYSFQELGSEVQLQPI
GRVVV

Specific function: Involved in the secretion of a proteinaceous elicitor of the hypersensitivity response in plants [H]

COG id: COG4789

COG function: function code U; Type III secretory pathway, component EscV

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family [H]

Homologues:

Organism=Escherichia coli, GI1788187, Length=691, Percent_Identity=32.561505065123, Blast_Score=318, Evalue=6e-88,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001712
- InterPro:   IPR006302 [H]

Pfam domain/function: PF00771 FHIPEP [H]

EC number: NA

Molecular weight: Translated: 69942; Mature: 69942

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: PS00994 FHIPEP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGDRVRATRYFAYSGEVAIAALVVAVIGLMILPLPTPLIDTLLGINITLSVVLLMVTMY
CCCCHHHHHEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHH
VPDSISLSSFPSLLLFTTLLRLSLNIASTKSILLHAEAGHIIESFGELVVGGNLVVGLVV
CCCCCCHHHCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHH
FLIITTVQFIVIAKGSERVAEVGARFTLDAMPGKQMSIDADLRGGNLTADEARRKRARLA
HHHHHHHHHHHEECCCHHHHHHCCCEEEECCCCCCEEEECCCCCCCCCHHHHHHHHHHHH
MESQLHGGMDGAMKFVKGDAIAGLVITMVNILAGIVVGVTYHGMTAGEAANRFAILSVGD
HHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCH
AMVSQIASLLISVAAGVMITRVANENETRLSSLGLDIGRQLTSNARALMAASVLLACFAF
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPGFPAVLFLLLAAAVGAGGYTIWRKQRDISGTDQRKLPSTSRKGAKGEAPHIRKNAPDF
HCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ASPLSMRLSPQLANLLDPARLDQAIESERRKLVELLGLPFPGIAIWQSESLQDMQYEVLI
CCCHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHEEHHEE
HDVPETRAELGDTDDMQAALARQAIAPLHARAHLFVGIQETQWMLEQVAVDYPGLVAEVN
ECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHCCCCHHHHHHH
KAMPAQRIADVLRRLLEERIPVRNIKSILESLVVWGPKEKDLLMLTEYVRCDLSRYLAHT
HCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
ATAGTGQLPAVMLDHAVEQMIRQSIRATAAGNFLALPPEQANQLVEQVERIVGDQAQHPL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHCCCCCCCH
AVVASMDVRRYVRRMIEARLTWLQVYSFQELGSEVQLQPIGRVVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCC
>Mature Secondary Structure
MLGDRVRATRYFAYSGEVAIAALVVAVIGLMILPLPTPLIDTLLGINITLSVVLLMVTMY
CCCCHHHHHEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHH
VPDSISLSSFPSLLLFTTLLRLSLNIASTKSILLHAEAGHIIESFGELVVGGNLVVGLVV
CCCCCCHHHCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHH
FLIITTVQFIVIAKGSERVAEVGARFTLDAMPGKQMSIDADLRGGNLTADEARRKRARLA
HHHHHHHHHHHEECCCHHHHHHCCCEEEECCCCCCEEEECCCCCCCCCHHHHHHHHHHHH
MESQLHGGMDGAMKFVKGDAIAGLVITMVNILAGIVVGVTYHGMTAGEAANRFAILSVGD
HHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCH
AMVSQIASLLISVAAGVMITRVANENETRLSSLGLDIGRQLTSNARALMAASVLLACFAF
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPGFPAVLFLLLAAAVGAGGYTIWRKQRDISGTDQRKLPSTSRKGAKGEAPHIRKNAPDF
HCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ASPLSMRLSPQLANLLDPARLDQAIESERRKLVELLGLPFPGIAIWQSESLQDMQYEVLI
CCCHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHEEHHEE
HDVPETRAELGDTDDMQAALARQAIAPLHARAHLFVGIQETQWMLEQVAVDYPGLVAEVN
ECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHCCCCHHHHHHH
KAMPAQRIADVLRRLLEERIPVRNIKSILESLVVWGPKEKDLLMLTEYVRCDLSRYLAHT
HCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
ATAGTGQLPAVMLDHAVEQMIRQSIRATAAGNFLALPPEQANQLVEQVERIVGDQAQHPL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHCCCCCCCH
AVVASMDVRRYVRRMIEARLTWLQVYSFQELGSEVQLQPIGRVVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1472717 [H]