| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is hpaP
Identifier: 21241177
GI number: 21241177
Start: 474891
End: 475505
Strand: Reverse
Name: hpaP
Synonym: XAC0404
Alternate gene names: NA
Gene position: 475505-474891 (Counterclockwise)
Preceding gene: 21241178
Following gene: 21241176
Centisome position: 9.19
GC content: 65.53
Gene sequence:
>615_bases GTGCGCATCCTGCCGGTCAGCGGCGCACTGCAGCGGCAGGCGGCTCCTGCCACGCCGGCCCGGTCGGCGCAGCGCTCCAG CTTCCTGCAACTGCGCCAGCGACTGCGCAGCGCGCAGCTCGCGCTTCCCTGCATGGTGCTGCCGCCGCAGTGCGACGAGG ATCGACCGGAGCCCGATGCCGAGGACAGGTTCACCGAAGCCCATGACGGCGCGCCCGCAACAACGGACCCGGCATTACCT GTCGATGGCACGAAATACCAAGAGCCACTCCAAGGCACCGACAATGGCGCGGTTGGGCGACATATCGCCACCGAGTGGAT ACGCACGCAGCGCGCCCAGATGGCGATCGACCACATCGCGCTGCGGGTGGCCGAGTTCTGCAACGCCACGCCAGTGCGCA GCGCAGGGAGCTGGGAAGCCTGGCTGGATATCGATCAAGGGCTCGTCGCACAGACGACGTTGTTTTTGCGGCTTTCGCCG GACCAGCTATCGCTTCGCTTCAATACCAGTTCGCCGGACGCGCGCGAGTTACTTTGGTGCGGAAGGCAGCGTCTGGAGGC TGCACTGAACTCCACGCTGAGTAGCACGCTCCAGATCAGCATCGAGGTTGTCTAA
Upstream 100 bases:
>100_bases CGTGGCTGCAGGTTTATTCGTTCCAGGAACTGGGTTCGGAGGTGCAGTTACAGCCGATCGGCAGGGTGGTGGTGTGATGC GCAAGCCGCCCCTCCGCCAT
Downstream 100 bases:
>100_bases CGCGGCACTGGCGACAGAAAGCCATTTGGAGGAACTCCATCTTGCTAACCGAGCAGAGCCAGGCTCCACCGGCACGTGCA CTCTCTCAGGCGTTGAGGCG
Product: HpaP protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MRILPVSGALQRQAAPATPARSAQRSSFLQLRQRLRSAQLALPCMVLPPQCDEDRPEPDAEDRFTEAHDGAPATTDPALP VDGTKYQEPLQGTDNGAVGRHIATEWIRTQRAQMAIDHIALRVAEFCNATPVRSAGSWEAWLDIDQGLVAQTTLFLRLSP DQLSLRFNTSSPDARELLWCGRQRLEAALNSTLSSTLQISIEVV
Sequences:
>Translated_204_residues MRILPVSGALQRQAAPATPARSAQRSSFLQLRQRLRSAQLALPCMVLPPQCDEDRPEPDAEDRFTEAHDGAPATTDPALP VDGTKYQEPLQGTDNGAVGRHIATEWIRTQRAQMAIDHIALRVAEFCNATPVRSAGSWEAWLDIDQGLVAQTTLFLRLSP DQLSLRFNTSSPDARELLWCGRQRLEAALNSTLSSTLQISIEVV >Mature_204_residues MRILPVSGALQRQAAPATPARSAQRSSFLQLRQRLRSAQLALPCMVLPPQCDEDRPEPDAEDRFTEAHDGAPATTDPALP VDGTKYQEPLQGTDNGAVGRHIATEWIRTQRAQMAIDHIALRVAEFCNATPVRSAGSWEAWLDIDQGLVAQTTLFLRLSP DQLSLRFNTSSPDARELLWCGRQRLEAALNSTLSSTLQISIEVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22452; Mature: 22452
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILPVSGALQRQAAPATPARSAQRSSFLQLRQRLRSAQLALPCMVLPPQCDEDRPEPDA CEEECCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCH EDRFTEAHDGAPATTDPALPVDGTKYQEPLQGTDNGAVGRHIATEWIRTQRAQMAIDHIA HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LRVAEFCNATPVRSAGSWEAWLDIDQGLVAQTTLFLRLSPDQLSLRFNTSSPDARELLWC HHHHHHHCCCCCCCCCCCHHEEECCCCHHEEEEEEEEECCCEEEEEECCCCCCHHHHHHH GRQRLEAALNSTLSSTLQISIEVV HHHHHHHHHHHHHCCEEEEEEEEC >Mature Secondary Structure MRILPVSGALQRQAAPATPARSAQRSSFLQLRQRLRSAQLALPCMVLPPQCDEDRPEPDA CEEECCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCH EDRFTEAHDGAPATTDPALPVDGTKYQEPLQGTDNGAVGRHIATEWIRTQRAQMAIDHIA HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LRVAEFCNATPVRSAGSWEAWLDIDQGLVAQTTLFLRLSPDQLSLRFNTSSPDARELLWC HHHHHHHCCCCCCCCCCCHHEEECCCCHHEEEEEEEEECCCEEEEEECCCCCCHHHHHHH GRQRLEAALNSTLSSTLQISIEVV HHHHHHHHHHHHHCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA