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The map label for this gene is hrcQ

Identifier: 21241176

GI number: 21241176

Start: 473845

End: 474759

Strand: Reverse

Name: hrcQ

Synonym: XAC0403

Alternate gene names: NA

Gene position: 474759-473845 (Counterclockwise)

Preceding gene: 21241177

Following gene: 21241175

Centisome position: 9.17

GC content: 66.89

Gene sequence:

>915_bases
GTGTTCGGCGATCCACGCGCCGCACGCCAATGCGGCTTCGCCACGCATCGCCGTCGCATCTCACCGAACGATGCGGCCCG
CCTGCGCCTGCAGTTGGACACCGGCCAGATGGATGTGCGGATTGCCGCGCGCGACGGCCTGGCGCTGCTACTGAACGAGG
ACGACCACGCACTCCGCGTTTCGATCGCGGGGATATTGCTGGCCGATCGCCTCGGCGCTCTTGCGCCGCTGGGCTTGGGC
GCTGCCGAGGTCATCGCCTTCGAGCGCGATGCAGAGCCAGACGACTGCCACGGCATCGGCATCACACTGGGCGATCTCGA
TGCGATTGCGCTGACGGCAAGCGCCCCCCTGCTGGCCACGCTGCGGACCGCAGTTGCCGCCTTGGCGGCGCCCGCGCCAC
TGCCAGTGTGGCTGGCCGCACTGCGCGTCAACACGCGCCTGCGCATCGGCGAGCGCACCGCATCGGCGGCGCTGCTGCAG
TCGCTGCGGCCTGGCGATGTCTTGCTGCATTGCACGGCCTCGGCTGCGGCCACCAGCGGCGAGGTGCTCTGGGGTATCGC
CGGGGGCGCGGTCTTGCGCGCTCCGGTACGCCTGAACCTGCAACAGATGATTCTGGAGGCCACCCCCACCATGCAGCACG
ATACGTTTGAGCCCGAAGTCGCACAGTCCGCCAGCAACGTTGCGGAACTGGAACTGCCGGTGCAGCTGGAAGTGGACCAA
CTTGCGCTGTCTCTATCGACGTTGTCGGGTTTGCAGCCCGGGCAGATCCTGGAGTTGTCGGTGCCGGTGGATCAAGCCGA
CATCCGCCTGGTCGTTTACGGCCAGACCATCGGCATCGGCAGGTTAGTGACAGTGGGCGAACATCTTGGCGTGCAGATCC
TCAGCATGTCGGAGAGCACGCATGCAGATGCCTGA

Upstream 100 bases:

>100_bases
GAACTCCATCTTGCTAACCGAGCAGAGCCAGGCTCCACCGGCACGTGCACTCTCTCAGGCGTTGAGGCGCGTTGCGCCCG
AGCGCGCACAGCTGAGCAGG

Downstream 100 bases:

>100_bases
CGTTGGCTCGCTGCTGCTGGTGGTCATCATGCTGGGCCTGCTGCCCTTCGCAGCGATGGTGGTCACCTCCTACACCAAGA
TCGTGGTGGTGCTCGGTCTG

Product: HrcQ protein

Products: NA

Alternate protein names: HrcQ Protein; Type III Secretion Apparatus Protein SctQ; Surface Presentation Of Antigens Domain-Containing Protein; Type III Secretion Inner Membrane Protein SctQ; Flagellar Motor Switch/Type III Secretory Pathway Protein; Hrp Conserved Protein HRCQ; Type III Secretion System Apparatus Protein Hrcq

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MFGDPRAARQCGFATHRRRISPNDAARLRLQLDTGQMDVRIAARDGLALLLNEDDHALRVSIAGILLADRLGALAPLGLG
AAEVIAFERDAEPDDCHGIGITLGDLDAIALTASAPLLATLRTAVAALAAPAPLPVWLAALRVNTRLRIGERTASAALLQ
SLRPGDVLLHCTASAAATSGEVLWGIAGGAVLRAPVRLNLQQMILEATPTMQHDTFEPEVAQSASNVAELELPVQLEVDQ
LALSLSTLSGLQPGQILELSVPVDQADIRLVVYGQTIGIGRLVTVGEHLGVQILSMSESTHADA

Sequences:

>Translated_304_residues
MFGDPRAARQCGFATHRRRISPNDAARLRLQLDTGQMDVRIAARDGLALLLNEDDHALRVSIAGILLADRLGALAPLGLG
AAEVIAFERDAEPDDCHGIGITLGDLDAIALTASAPLLATLRTAVAALAAPAPLPVWLAALRVNTRLRIGERTASAALLQ
SLRPGDVLLHCTASAAATSGEVLWGIAGGAVLRAPVRLNLQQMILEATPTMQHDTFEPEVAQSASNVAELELPVQLEVDQ
LALSLSTLSGLQPGQILELSVPVDQADIRLVVYGQTIGIGRLVTVGEHLGVQILSMSESTHADA
>Mature_304_residues
MFGDPRAARQCGFATHRRRISPNDAARLRLQLDTGQMDVRIAARDGLALLLNEDDHALRVSIAGILLADRLGALAPLGLG
AAEVIAFERDAEPDDCHGIGITLGDLDAIALTASAPLLATLRTAVAALAAPAPLPVWLAALRVNTRLRIGERTASAALLQ
SLRPGDVLLHCTASAAATSGEVLWGIAGGAVLRAPVRLNLQQMILEATPTMQHDTFEPEVAQSASNVAELELPVQLEVDQ
LALSLSTLSGLQPGQILELSVPVDQADIRLVVYGQTIGIGRLVTVGEHLGVQILSMSESTHADA

Specific function: Unknown

COG id: COG1886

COG function: function code NU; Flagellar motor switch/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31907; Mature: 31907

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGDPRAARQCGFATHRRRISPNDAARLRLQLDTGQMDVRIAARDGLALLLNEDDHALRV
CCCCCHHHHHCCCHHHHCCCCCCCCEEEEEEEECCCEEEEEEECCCEEEEECCCCCEEEE
SIAGILLADRLGALAPLGLGAAEVIAFERDAEPDDCHGIGITLGDLDAIALTASAPLLAT
EEHHHHHHHHHCCCCCCCCCHHHEEEEECCCCCCCCCEEEEEECCCCEEEEECCCHHHHH
LRTAVAALAAPAPLPVWLAALRVNTRLRIGERTASAALLQSLRPGDVLLHCTASAAATSG
HHHHHHHHCCCCCHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCEEEEEECCCCCCCC
EVLWGIAGGAVLRAPVRLNLQQMILEATPTMQHDTFEPEVAQSASNVAELELPVQLEVDQ
CEEEEECCCEEEECCHHCCHHHHHHHCCCCCCCCCCCCHHHHCCCCCEEEEEEEEEEHHH
LALSLSTLSGLQPGQILELSVPVDQADIRLVVYGQTIGIGRLVTVGEHLGVQILSMSEST
HHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEECEECCCEEEEECCCCCEEEEEECCCC
HADA
CCCC
>Mature Secondary Structure
MFGDPRAARQCGFATHRRRISPNDAARLRLQLDTGQMDVRIAARDGLALLLNEDDHALRV
CCCCCHHHHHCCCHHHHCCCCCCCCEEEEEEEECCCEEEEEEECCCEEEEECCCCCEEEE
SIAGILLADRLGALAPLGLGAAEVIAFERDAEPDDCHGIGITLGDLDAIALTASAPLLAT
EEHHHHHHHHHCCCCCCCCCHHHEEEEECCCCCCCCCEEEEEECCCCEEEEECCCHHHHH
LRTAVAALAAPAPLPVWLAALRVNTRLRIGERTASAALLQSLRPGDVLLHCTASAAATSG
HHHHHHHHCCCCCHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCEEEEEECCCCCCCC
EVLWGIAGGAVLRAPVRLNLQQMILEATPTMQHDTFEPEVAQSASNVAELELPVQLEVDQ
CEEEEECCCEEEECCHHCCHHHHHHHCCCCCCCCCCCCHHHHCCCCCEEEEEEEEEEHHH
LALSLSTLSGLQPGQILELSVPVDQADIRLVVYGQTIGIGRLVTVGEHLGVQILSMSEST
HHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEECEECCCEEEEECCCCCEEEEEECCCC
HADA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA