| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241053
Identifier: 21241053
GI number: 21241053
Start: 333341
End: 334003
Strand: Direct
Name: 21241053
Synonym: XAC0279
Alternate gene names: NA
Gene position: 333341-334003 (Clockwise)
Preceding gene: 21241050
Following gene: 21241054
Centisome position: 6.44
GC content: 66.06
Gene sequence:
>663_bases ATGTCCAATCCCTCATTCCCCACCGAATCGGCTGCGTTGACCTTGGAAGGGCCGGTTGGCCCACTGGATGTCGCGGTCGA TCTGCCCGAGCCGGATGTTGCCGCGCACGCGGTCACCGCCATCTTCTGCCATCCGCTCTCCACCGAGGGCGGCAGCATGC ACAACAAGGTCGTCACCATGGCGGCGCGCGCACTGCGCGAGCTGGGCATCACCGTGGTGCGCTTCAATTTCCGCAGCGTC GGCAATTCGGCCGGCGCATTCGACCATGGGGTTGGCGAGCAGGACGATCTGCGTGCGGTTGCCGAGTGGGTGCGTGCGCA GCAGCCAGGCCACACCTTGTGGTTGGGCGGTTTCAGCTTCGGCGCGTATGTCGCGTTGCGCGCCGCCTGCTCGCTCCAAC CGCAGGTGCTGATCTCGATCGCGCCGCCGGCCGGGCGCTGGGATTTCAGCGACATCCAGCCGCCGGCGCAATGGTTGGTG ATCCAGGGCGATGCCGACGAGATCGTCGACCCGCAAGCGGTCTACGACTGGCTGGAAACGCTGGAGCAGCAACCCGAGCT GGTGCGCATGCCCGACACCAGCCATTTCTTCCACCGCAAATTGATCGACCTGCGCGGTGCGATCCAGCATGGTGTCCGGC GCTGGTTGCCGGCCGCAGTCTGA
Upstream 100 bases:
>100_bases CACTGCAGACAACGGCAAACAGCAGAAAATGCATGGGCAACGCAACGAAGTGTGCAGGCAGGGCGATGAACGCGGCCGGC GGGGCGGCTATTATGCAGGC
Downstream 100 bases:
>100_bases CCGCGGCACGGCCCACGCGTATCGCCCGGCGATGCGCTGTTGAGCGGTCCGGGCGACAGCCGGCCCGCGGAGAATGCAAT GAGTGAGATGACCCCGTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MSNPSFPTESAALTLEGPVGPLDVAVDLPEPDVAAHAVTAIFCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSV GNSAGAFDHGVGEQDDLRAVAEWVRAQQPGHTLWLGGFSFGAYVALRAACSLQPQVLISIAPPAGRWDFSDIQPPAQWLV IQGDADEIVDPQAVYDWLETLEQQPELVRMPDTSHFFHRKLIDLRGAIQHGVRRWLPAAV
Sequences:
>Translated_220_residues MSNPSFPTESAALTLEGPVGPLDVAVDLPEPDVAAHAVTAIFCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSV GNSAGAFDHGVGEQDDLRAVAEWVRAQQPGHTLWLGGFSFGAYVALRAACSLQPQVLISIAPPAGRWDFSDIQPPAQWLV IQGDADEIVDPQAVYDWLETLEQQPELVRMPDTSHFFHRKLIDLRGAIQHGVRRWLPAAV >Mature_219_residues SNPSFPTESAALTLEGPVGPLDVAVDLPEPDVAAHAVTAIFCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVG NSAGAFDHGVGEQDDLRAVAEWVRAQQPGHTLWLGGFSFGAYVALRAACSLQPQVLISIAPPAGRWDFSDIQPPAQWLVI QGDADEIVDPQAVYDWLETLEQQPELVRMPDTSHFFHRKLIDLRGAIQHGVRRWLPAAV
Specific function: Unknown
COG id: COG2945
COG function: function code R; Predicted hydrolase of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000383 [H]
Pfam domain/function: PF02129 Peptidase_S15 [H]
EC number: NA
Molecular weight: Translated: 23932; Mature: 23801
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPSFPTESAALTLEGPVGPLDVAVDLPEPDVAAHAVTAIFCHPLSTEGGSMHNKVVTM CCCCCCCCCCCEEEECCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH AARALRELGITVVRFNFRSVGNSAGAFDHGVGEQDDLRAVAEWVRAQQPGHTLWLGGFSF HHHHHHHCCCEEEEEEHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCHHH GAYVALRAACSLQPQVLISIAPPAGRWDFSDIQPPAQWLVIQGDADEIVDPQAVYDWLET HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCHHHHCCHHHHHHHHHH LEQQPELVRMPDTSHFFHRKLIDLRGAIQHGVRRWLPAAV HHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SNPSFPTESAALTLEGPVGPLDVAVDLPEPDVAAHAVTAIFCHPLSTEGGSMHNKVVTM CCCCCCCCCCEEEECCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH AARALRELGITVVRFNFRSVGNSAGAFDHGVGEQDDLRAVAEWVRAQQPGHTLWLGGFSF HHHHHHHCCCEEEEEEHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCHHH GAYVALRAACSLQPQVLISIAPPAGRWDFSDIQPPAQWLVIQGDADEIVDPQAVYDWLET HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCHHHHCCHHHHHHHHHH LEQQPELVRMPDTSHFFHRKLIDLRGAIQHGVRRWLPAAV HHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]