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The map label for this gene is yhcM [H]

Identifier: 21241054

GI number: 21241054

Start: 334091

End: 335176

Strand: Direct

Name: yhcM [H]

Synonym: XAC0280

Alternate gene names: 21241054

Gene position: 334091-335176 (Clockwise)

Preceding gene: 21241053

Following gene: 21241055

Centisome position: 6.46

GC content: 65.93

Gene sequence:

>1086_bases
ATGACCCCGTCGCAGCGCTACGCCGCCGGCGTACAACGCGGCGACTGGCGCGCCGACCCTGCGCAGCAGGCGGCCCTGGC
GGAGCTGGACCGCATCCACGAGGCGCTGGTGGACAGCGCGCAGGATGGATGGCTGGACCGGCTGTCGGCATTCTGGAAGA
AGCCCGAGCCGGTACGCGGCTTGTACTTCTGGGGCGGTGTCGGGCGCGGCAAGACCTTTCTGGTCGATCTGTTCTACGAC
GGCCTGCCGATCGAGCAGAAATACCGCACCCACTTCCACCGTTTCATGCGCGGCGTGCACGAGCAGTTGCGCGAGCACGC
CGGTCAAAGCGATCCGCTGGCACGCATCGCCCAACAGTGGCGCGAGAACCTGCGCGTGCTGGTGCTGGACGAATTCTTCG
TTACCGATATCGGCGATGCGATGCTGCTGGCACGCTTGCTCGAACGCTTGTTCGCCGAAGGGGTGACGCTGGTGACCACG
TCCAACACCGCGCCGGAAAACCTCTATGCCAACGGCTTGCAGCGCGACAGTTTCATGCCGGCGATCGGGTTGCTGCAGAA
GTTCTGCGTGGAGCTTTACGCGGAAGGCACCGAGGATTACCGCATGCGCGCGCTGACGCGCTCGCCGGTGTATCGCGCGC
CGTTGGATGCGCAGGCCGACGATTGGCTTGCGCAGCGTTGGGCCGAGTTGAGCGGCAACGCCGAAGCGCGCGCCGGCAAT
ATCGAAATCGAGGCGCGCAAGATTCCGGTGCGCGCACGCGGCAAGAGCATCGCCTGGTTCGATTTTGCTGCGCTCTGCGA
AGGCCCGCGCGGTCCCAGCGACTACATCGAGATTGCGCGCGAGTTCACCACCGTGTTGCTGGGCGGCATCCCGCACTTCG
ACCGCATGAACGAAGACGCCGCGCGCCGCTTCGTCAACCTGATCGACGAGCTGTACGACCGCCATGTCAATCTGGTCTGC
ACCGCGCAGGACGCGCCGCCGGCCTTGTACAGCGGCCAGCGCCTGGCCGGCGCGTTCGAGCGCACCGCTTCGCGCCTGAT
CGAAATGCAGAGCGCGGAGTATCTGGCAACGGCGCATCGCGCGTAA

Upstream 100 bases:

>100_bases
GGCCGCAGTCTGACCGCGGCACGGCCCACGCGTATCGCCCGGCGATGCGCTGTTGAGCGGTCCGGGCGACAGCCGGCCCG
CGGAGAATGCAATGAGTGAG

Downstream 100 bases:

>100_bases
GCCGGTCATCGGATAGGCGAGGACCTGTGCGATTGCCATTGCCGTGCATGTGCGGTGGTGGCACTGCACTGCCGGCAGAG
TGATCGCTCAACATCGCTGA

Product: ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 360

Protein sequence:

>361_residues
MTPSQRYAAGVQRGDWRADPAQQAALAELDRIHEALVDSAQDGWLDRLSAFWKKPEPVRGLYFWGGVGRGKTFLVDLFYD
GLPIEQKYRTHFHRFMRGVHEQLREHAGQSDPLARIAQQWRENLRVLVLDEFFVTDIGDAMLLARLLERLFAEGVTLVTT
SNTAPENLYANGLQRDSFMPAIGLLQKFCVELYAEGTEDYRMRALTRSPVYRAPLDAQADDWLAQRWAELSGNAEARAGN
IEIEARKIPVRARGKSIAWFDFAALCEGPRGPSDYIEIAREFTTVLLGGIPHFDRMNEDAARRFVNLIDELYDRHVNLVC
TAQDAPPALYSGQRLAGAFERTASRLIEMQSAEYLATAHRA

Sequences:

>Translated_361_residues
MTPSQRYAAGVQRGDWRADPAQQAALAELDRIHEALVDSAQDGWLDRLSAFWKKPEPVRGLYFWGGVGRGKTFLVDLFYD
GLPIEQKYRTHFHRFMRGVHEQLREHAGQSDPLARIAQQWRENLRVLVLDEFFVTDIGDAMLLARLLERLFAEGVTLVTT
SNTAPENLYANGLQRDSFMPAIGLLQKFCVELYAEGTEDYRMRALTRSPVYRAPLDAQADDWLAQRWAELSGNAEARAGN
IEIEARKIPVRARGKSIAWFDFAALCEGPRGPSDYIEIAREFTTVLLGGIPHFDRMNEDAARRFVNLIDELYDRHVNLVC
TAQDAPPALYSGQRLAGAFERTASRLIEMQSAEYLATAHRA
>Mature_360_residues
TPSQRYAAGVQRGDWRADPAQQAALAELDRIHEALVDSAQDGWLDRLSAFWKKPEPVRGLYFWGGVGRGKTFLVDLFYDG
LPIEQKYRTHFHRFMRGVHEQLREHAGQSDPLARIAQQWRENLRVLVLDEFFVTDIGDAMLLARLLERLFAEGVTLVTTS
NTAPENLYANGLQRDSFMPAIGLLQKFCVELYAEGTEDYRMRALTRSPVYRAPLDAQADDWLAQRWAELSGNAEARAGNI
EIEARKIPVRARGKSIAWFDFAALCEGPRGPSDYIEIAREFTTVLLGGIPHFDRMNEDAARRFVNLIDELYDRHVNLVCT
AQDAPPALYSGQRLAGAFERTASRLIEMQSAEYLATAHRA

Specific function: Unknown

COG id: COG1485

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AFG1 ATPase family [H]

Homologues:

Organism=Homo sapiens, GI21918872, Length=401, Percent_Identity=32.9177057356608, Blast_Score=218, Evalue=5e-57,
Organism=Escherichia coli, GI1789627, Length=371, Percent_Identity=42.3180592991914, Blast_Score=298, Evalue=4e-82,
Organism=Caenorhabditis elegans, GI17505769, Length=414, Percent_Identity=32.6086956521739, Blast_Score=209, Evalue=1e-54,
Organism=Saccharomyces cerevisiae, GI6320783, Length=411, Percent_Identity=28.9537712895377, Blast_Score=158, Evalue=1e-39,
Organism=Drosophila melanogaster, GI20129913, Length=425, Percent_Identity=28.9411764705882, Blast_Score=164, Evalue=1e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005654 [H]

Pfam domain/function: PF03969 AFG1_ATPase [H]

EC number: NA

Molecular weight: Translated: 40889; Mature: 40758

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPSQRYAAGVQRGDWRADPAQQAALAELDRIHEALVDSAQDGWLDRLSAFWKKPEPVRG
CCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCE
LYFWGGVGRGKTFLVDLFYDGLPIEQKYRTHFHRFMRGVHEQLREHAGQSDPLARIAQQW
EEEECCCCCCCEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
RENLRVLVLDEFFVTDIGDAMLLARLLERLFAEGVTLVTTSNTAPENLYANGLQRDSFMP
HHCCEEEEEHHHHHHHCCHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHCCCCCCCCCH
AIGLLQKFCVELYAEGTEDYRMRALTRSPVYRAPLDAQADDWLAQRWAELSGNAEARAGN
HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
IEIEARKIPVRARGKSIAWFDFAALCEGPRGPSDYIEIAREFTTVLLGGIPHFDRMNEDA
EEEEEEECCEEECCCEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCHHH
ARRFVNLIDELYDRHVNLVCTAQDAPPALYSGQRLAGAFERTASRLIEMQSAEYLATAHR
HHHHHHHHHHHHHCCEEEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
A
C
>Mature Secondary Structure 
TPSQRYAAGVQRGDWRADPAQQAALAELDRIHEALVDSAQDGWLDRLSAFWKKPEPVRG
CCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCE
LYFWGGVGRGKTFLVDLFYDGLPIEQKYRTHFHRFMRGVHEQLREHAGQSDPLARIAQQW
EEEECCCCCCCEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
RENLRVLVLDEFFVTDIGDAMLLARLLERLFAEGVTLVTTSNTAPENLYANGLQRDSFMP
HHCCEEEEEHHHHHHHCCHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHCCCCCCCCCH
AIGLLQKFCVELYAEGTEDYRMRALTRSPVYRAPLDAQADDWLAQRWAELSGNAEARAGN
HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
IEIEARKIPVRARGKSIAWFDFAALCEGPRGPSDYIEIAREFTTVLLGGIPHFDRMNEDA
EEEEEEECCEEECCCEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCHHH
ARRFVNLIDELYDRHVNLVCTAQDAPPALYSGQRLAGAFERTASRLIEMQSAEYLATAHR
HHHHHHHHHHHHHCCEEEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]