| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241048
Identifier: 21241048
GI number: 21241048
Start: 326970
End: 328799
Strand: Direct
Name: 21241048
Synonym: XAC0274
Alternate gene names: NA
Gene position: 326970-328799 (Clockwise)
Preceding gene: 21241047
Following gene: 21241050
Centisome position: 6.32
GC content: 67.21
Gene sequence:
>1830_bases GTGCCTGGCGGTCATTCCCCCTGGTTTGCTAGCCTGTTTCTGCGCTTTTCGTTATCACGCGCCGCCTTCCGGGCGGCGTT TGCGTTTGGATTCACTTACTGGAGTCGTTCGATGTCGCCTCGCCCGCTGGTTGTGCTCGGTTTGGTTGGTCTGTTGGCTC CGTTGCTGTGCAGCGCTGCCGATGGTGCCGCGCAGCGGCTCTCGATTGCCGACGTGCAGGGCGAAGACAGCCGCAGCCCG TACGACGGCCGCGTAGTGGAGGTGGAGGGAATCGTCACCGCCGATACGCGCGTGGGGCTGGCCGGCCTGTTCGTGCAGCA GCCCGGCTTCGAGCCGCGGCGCTCGCATGGCCTGTTCGTCACCGGGGCCGGCAATGCCGAGCTGGCGGTGGGCGACCGCG TGCGCATCGTCGGCACCGTGCGCGAAGTCTCGGCAGGTGGTGAGGCGAGCCTGACCACCGTGGACGCCAGCAGCATCGAG CGGCTTGCCAGTGGCCAGCCGGTGCCGGTACGCATGCTCAGCGGGCCGCCGGCCAACTGGGAAGCGCTGGAAGGCGAACA CGTGCGTATCGCCTCGCTCACGCTCAATGGCAGCGACCGCCTGGACACGTACGGCGAGCTGGTCGCCGCGTTCGGCGGAC GCCTGTGGCAGCCGAGCGAGGTCGCCGCTGCCGGCACGCCGGCGTTCGTGCAGGTGCAGGCCGATAACGCACGCCGTCGC GTGTTGCTGGACGATGCGCGCAACGGCCGCAGCCCCAGGACGGTGTCGTATCTGCCGGCCGATCCGGTGTTGCGCAGCGG CAGCCTGCTCAAATCGGTCGATGGCATCGTCGACCAACGCTACGACGGCAACTACCGCATCCAGGTGCTGGGCCCACTGA CCTTGCCGGCGATGCCTACAGCCGTTGCGCCGCAGGTGGGCGGCGATCTGCGTATTGCCTCGTTCAACCTGGAGAATTTC TTCAACGGCAATGGCCGTGGCGGTGGCTTCCCGACCAAGCGTGGCGCACGCACGCACGAACAATTCCAGGCGCAGCTGGC CAAGTTGGTCGCCACCATCGTGCCATTGGGTGCCGACGTGGCTGCGTTGATGGAAGTGGAAAACGACGGCAACGGCGCCG ATGCGGCGGTATCCCAACTGGTGGCCGCGCTCAACGCTGCCGGCAAGGACAAGGATTGGCAGTTCGTCGATACCGGCAGC GGCCCGGGCGACGATGCGATCCGGGTCGGCATCATTTATCGCAGCTCGCAGGTCACCCCAGTCGGCAGGCCGGCCACGCT GACCGGCGGGCCGTTCGAGAACCACAGTCGCGTGCCGCTGGCGCAGGCGTTCCGCAGTGCGCGTGGAGCCACCTTCGTGG TGGTCGCCAATCACTTCAAGTCCAAGGGCTGCGGCAACGCCAGCGGGGCCGATGCCGATCAGCAGGACGGCCAGGCCTGC TGGAATGCCACCCGTACTGAATCGGCCAAGCGGTTGCACCAGTGGTTGCAGACCGACCCCACCGGTGCGCAGACCAAACT CGCCGTGCTGCTGGGCGACTTCAATGCCTATGCGATGGAAACGCCGATGCGCAGCCTGCGCGCCAGCGGCTGGCAGGACG CGTTTGCAGTGGCCGGTGTGAAGCAGCCCTACAGCTACGTGTACGACGGCCTGAGCGGGCGGCTGGACCATGCGCTGCTC AGCCCGGCGATGGCCAAGCAACTGCGGGGCGCGGCCGAATGGCATGTCAATGCGGATGTCATGGATGCCGCCGGCTACGC CAAGCGCAATCTGCCCGGGCCGTGGCGCAGCTCCGATCACGACCCGGTGTTGCTGGGTTTTTCGCTGTAG
Upstream 100 bases:
>100_bases CGTTGCGTTGCTCATGGAGCGCGTCGCGGGCAGATCGTGCGCAGGCGCTGCAGCACTGCATTGGTGCACGCGATAGCCGC ATCACCGTTGCGCAGCGCAC
Downstream 100 bases:
>100_bases CGCTGCCGATCATGACAGTGCACGCGGCACGCTGTGCGCGTGCCTGGGCGAATTGGGTACGAGCGTGCTGCTGCAAATCG GGCGGTCATCGATGATTGCG
Product: nuclease
Products: NA
Alternate protein names: Extracellular Nuclease; Endonuclease/Exonuclease/Phosphatase Family Protein; Nuclease; 5-Nucleotidase Domain Protein; Extracellular Ribonuclease/Nuclease Fusion Protein; 5-Nucleotidase Domain-Containing Protein; Large Secreted Protein; Extracellular Nuclease-Like Protein; 5-Nucleotidase; Endonuclease/Exonuclease/Phosphatase Family; PKD Domain-Containing Protein; Alkaline Phosphatase; Exported Nuclease; Extracellular Nuclease-Like; Glutamate-Cysteine Ligase/Putative Amino Acid Ligase; Outer Membrane Adhesin Like Proteiin; LPXTG-Motif Cell Wall Anchor Domain Protein; Extracellular Nuclease/Phosphatase; 5-Nucleotidase Family Protein; Calcineurin-Like Phosphoesterase; Endonuclease I
Number of amino acids: Translated: 609; Mature: 608
Protein sequence:
>609_residues MPGGHSPWFASLFLRFSLSRAAFRAAFAFGFTYWSRSMSPRPLVVLGLVGLLAPLLCSAADGAAQRLSIADVQGEDSRSP YDGRVVEVEGIVTADTRVGLAGLFVQQPGFEPRRSHGLFVTGAGNAELAVGDRVRIVGTVREVSAGGEASLTTVDASSIE RLASGQPVPVRMLSGPPANWEALEGEHVRIASLTLNGSDRLDTYGELVAAFGGRLWQPSEVAAAGTPAFVQVQADNARRR VLLDDARNGRSPRTVSYLPADPVLRSGSLLKSVDGIVDQRYDGNYRIQVLGPLTLPAMPTAVAPQVGGDLRIASFNLENF FNGNGRGGGFPTKRGARTHEQFQAQLAKLVATIVPLGADVAALMEVENDGNGADAAVSQLVAALNAAGKDKDWQFVDTGS GPGDDAIRVGIIYRSSQVTPVGRPATLTGGPFENHSRVPLAQAFRSARGATFVVVANHFKSKGCGNASGADADQQDGQAC WNATRTESAKRLHQWLQTDPTGAQTKLAVLLGDFNAYAMETPMRSLRASGWQDAFAVAGVKQPYSYVYDGLSGRLDHALL SPAMAKQLRGAAEWHVNADVMDAAGYAKRNLPGPWRSSDHDPVLLGFSL
Sequences:
>Translated_609_residues MPGGHSPWFASLFLRFSLSRAAFRAAFAFGFTYWSRSMSPRPLVVLGLVGLLAPLLCSAADGAAQRLSIADVQGEDSRSP YDGRVVEVEGIVTADTRVGLAGLFVQQPGFEPRRSHGLFVTGAGNAELAVGDRVRIVGTVREVSAGGEASLTTVDASSIE RLASGQPVPVRMLSGPPANWEALEGEHVRIASLTLNGSDRLDTYGELVAAFGGRLWQPSEVAAAGTPAFVQVQADNARRR VLLDDARNGRSPRTVSYLPADPVLRSGSLLKSVDGIVDQRYDGNYRIQVLGPLTLPAMPTAVAPQVGGDLRIASFNLENF FNGNGRGGGFPTKRGARTHEQFQAQLAKLVATIVPLGADVAALMEVENDGNGADAAVSQLVAALNAAGKDKDWQFVDTGS GPGDDAIRVGIIYRSSQVTPVGRPATLTGGPFENHSRVPLAQAFRSARGATFVVVANHFKSKGCGNASGADADQQDGQAC WNATRTESAKRLHQWLQTDPTGAQTKLAVLLGDFNAYAMETPMRSLRASGWQDAFAVAGVKQPYSYVYDGLSGRLDHALL SPAMAKQLRGAAEWHVNADVMDAAGYAKRNLPGPWRSSDHDPVLLGFSL >Mature_608_residues PGGHSPWFASLFLRFSLSRAAFRAAFAFGFTYWSRSMSPRPLVVLGLVGLLAPLLCSAADGAAQRLSIADVQGEDSRSPY DGRVVEVEGIVTADTRVGLAGLFVQQPGFEPRRSHGLFVTGAGNAELAVGDRVRIVGTVREVSAGGEASLTTVDASSIER LASGQPVPVRMLSGPPANWEALEGEHVRIASLTLNGSDRLDTYGELVAAFGGRLWQPSEVAAAGTPAFVQVQADNARRRV LLDDARNGRSPRTVSYLPADPVLRSGSLLKSVDGIVDQRYDGNYRIQVLGPLTLPAMPTAVAPQVGGDLRIASFNLENFF NGNGRGGGFPTKRGARTHEQFQAQLAKLVATIVPLGADVAALMEVENDGNGADAAVSQLVAALNAAGKDKDWQFVDTGSG PGDDAIRVGIIYRSSQVTPVGRPATLTGGPFENHSRVPLAQAFRSARGATFVVVANHFKSKGCGNASGADADQQDGQACW NATRTESAKRLHQWLQTDPTGAQTKLAVLLGDFNAYAMETPMRSLRASGWQDAFAVAGVKQPYSYVYDGLSGRLDHALLS PAMAKQLRGAAEWHVNADVMDAAGYAKRNLPGPWRSSDHDPVLLGFSL
Specific function: Unknown
COG id: COG2374
COG function: function code R; Predicted extracellular nuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64543; Mature: 64412
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGGHSPWFASLFLRFSLSRAAFRAAFAFGFTYWSRSMSPRPLVVLGLVGLLAPLLCSAA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC DGAAQRLSIADVQGEDSRSPYDGRVVEVEGIVTADTRVGLAGLFVQQPGFEPRRSHGLFV CCHHHEEEEEECCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCEEE TGAGNAELAVGDRVRIVGTVREVSAGGEASLTTVDASSIERLASGQPVPVRMLSGPPANW EECCCCEEEECCEEEEEEEEEHHCCCCCCEEEEECHHHHHHHHCCCCCEEEEECCCCCCC EALEGEHVRIASLTLNGSDRLDTYGELVAAFGGRLWQPSEVAAAGTPAFVQVQADNARRR CCCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCHHCCCCCEEEEEECCCCCCE VLLDDARNGRSPRTVSYLPADPVLRSGSLLKSVDGIVDQRYDGNYRIQVLGPLTLPAMPT EEEECCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCC AVAPQVGGDLRIASFNLENFFNGNGRGGGFPTKRGARTHEQFQAQLAKLVATIVPLGADV CCCCCCCCCEEEEEECHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCE AALMEVENDGNGADAAVSQLVAALNAAGKDKDWQFVDTGSGPGDDAIRVGIIYRSSQVTP EEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCEEEEEEEECCCCCC VGRPATLTGGPFENHSRVPLAQAFRSARGATFVVVANHFKSKGCGNASGADADQQDGQAC CCCCCEECCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHH WNATRTESAKRLHQWLQTDPTGAQTKLAVLLGDFNAYAMETPMRSLRASGWQDAFAVAGV HCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHCCC KQPYSYVYDGLSGRLDHALLSPAMAKQLRGAAEWHVNADVMDAAGYAKRNLPGPWRSSDH CCCHHHHHCCCCCHHHHHHHCHHHHHHHCCCCEEECCCCHHHCCCCHHCCCCCCCCCCCC DPVLLGFSL CCEEEEECC >Mature Secondary Structure PGGHSPWFASLFLRFSLSRAAFRAAFAFGFTYWSRSMSPRPLVVLGLVGLLAPLLCSAA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC DGAAQRLSIADVQGEDSRSPYDGRVVEVEGIVTADTRVGLAGLFVQQPGFEPRRSHGLFV CCHHHEEEEEECCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCEEE TGAGNAELAVGDRVRIVGTVREVSAGGEASLTTVDASSIERLASGQPVPVRMLSGPPANW EECCCCEEEECCEEEEEEEEEHHCCCCCCEEEEECHHHHHHHHCCCCCEEEEECCCCCCC EALEGEHVRIASLTLNGSDRLDTYGELVAAFGGRLWQPSEVAAAGTPAFVQVQADNARRR CCCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCHHCCCCCEEEEEECCCCCCE VLLDDARNGRSPRTVSYLPADPVLRSGSLLKSVDGIVDQRYDGNYRIQVLGPLTLPAMPT EEEECCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCC AVAPQVGGDLRIASFNLENFFNGNGRGGGFPTKRGARTHEQFQAQLAKLVATIVPLGADV CCCCCCCCCEEEEEECHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCE AALMEVENDGNGADAAVSQLVAALNAAGKDKDWQFVDTGSGPGDDAIRVGIIYRSSQVTP EEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCEEEEEEEECCCCCC VGRPATLTGGPFENHSRVPLAQAFRSARGATFVVVANHFKSKGCGNASGADADQQDGQAC CCCCCEECCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHH WNATRTESAKRLHQWLQTDPTGAQTKLAVLLGDFNAYAMETPMRSLRASGWQDAFAVAGV HCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHCCC KQPYSYVYDGLSGRLDHALLSPAMAKQLRGAAEWHVNADVMDAAGYAKRNLPGPWRSSDH CCCHHHHHCCCCCHHHHHHHCHHHHHHHCCCCEEECCCCHHHCCCCHHCCCCCCCCCCCC DPVLLGFSL CCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA