Click here to switch to the map view.

The map label for this gene is 21241008

Identifier: 21241008

GI number: 21241008

Start: 281974

End: 283143

Strand: Direct

Name: 21241008

Synonym: XAC0234

Alternate gene names: NA

Gene position: 281974-283143 (Clockwise)

Preceding gene: 21241007

Following gene: 21241009

Centisome position: 5.45

GC content: 61.71

Gene sequence:

>1170_bases
ATGCCGCATCGCACGACTGGGCATTATGTTGCCGGAGCCCTTGCCGGCAGCCGCTATCAAGCGTTCGTGCCCAGCCCACT
GCCGCCGGAGCCGGCATTGGACTTCTCCCTGGTTGCGTTGGTTGCGCGCAAGGAGCTTGCCGATCAGGCATTGGGGCGAT
TGGATGGCATCACGCTGATGCTGCCGGACCCGGAGCTTTTCCTCTATCAGTACGTGCGCAAGGAAGCCTTGCTGTCATCC
CAGATCGAGGGGACGCAATCGTCACTTTCGGATTTGCTGTTGTTCGAAATGGACGCGGCACCGGGCGTCCCCATCGACGA
TGTTGAGGAAGTCTCCAACTACGTTGCTGCCCTCAATCATGGTCTGCGTCGCCTGCGAGAGGACGATTTTCCGCTATCGC
TGCGGTTGATCCGCGAAATGCATGCGTTGCTGCTGCAGGGTGGCCGCGGCGCCAGCAAGCAGCCCGGCGAGTTCCGTCGC
AGTCAGGTATGGGTAGGAGGGGCATCGCCCGCACTCGCCCATTTCGTTCCGCCACCGCCAGATGCACTGCCCGATACGCT
AGCGGCACTCGAACAGTTTCTGCATGCGTCGCAGGGCCAGATGCCCTCGTTGGTGAAAGCTGCCCTTGCGCACGTGCAGT
TCGAGACCATCCATCCTTTCAGCGATGGCAACGGAAGGCTGGGACGGCTCCTGATTACCCTGATTCTGTGTAGCGAAGGT
GTGCTGCGAGAGCCGAGCCTGTACCTCAGCCTGTATTTCAAGCGGCGCCGCGCCGATTACTATGACCGCCTCAACGCAGT
CCGGCTCAATGGCGACTGGGAAGGGTGGCTGGGTTTCTTTCTGGACGGCGTGGCCGAAACCGCCCAGCAAGCTGTCGATA
CTGCACAGCGGTTGCTGGCGCTGTTGGCGCGCGATCGTGCACGCATCGCAGCGCTAGGCCAGCGAGCAGGCAATGTGGGC
TTGGTGTTTGAGCAATTCGCGCGGCGTGTGGTGCTGGCGGTACCGCAGGTTGCGCCGCACCTGTCGCTGAGTGTGCCGAC
CATTCGCGCAGCGGTACGCACGCTGCAAGAGTTGGACATCGTCAACGAACTCACAGGCCAGCAGCGGCATCGCATCTTTG
CCTATCAGGCGTATCTCGACATCCTCAGCGAAGGCGCGCAACCGCTGTGA

Upstream 100 bases:

>100_bases
ACGGCATGCCTTGCTGCATGCCGTGCAACCTCGCCGCTTAAGAAAAAAAGTGCTATCTAAGTTTCCTTGCAAGAACCATT
GCTGCCTGTAAGGAAAGAAG

Downstream 100 bases:

>100_bases
GCGATTTCCTCGCACACCACTGTTGCAAACAGTTCAACCTTGCAGCGATGGTGAGGTGCGATGTCTTAGACGAATCGCCA
GACGCATTTCAGTCCCTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 388

Protein sequence:

>389_residues
MPHRTTGHYVAGALAGSRYQAFVPSPLPPEPALDFSLVALVARKELADQALGRLDGITLMLPDPELFLYQYVRKEALLSS
QIEGTQSSLSDLLLFEMDAAPGVPIDDVEEVSNYVAALNHGLRRLREDDFPLSLRLIREMHALLLQGGRGASKQPGEFRR
SQVWVGGASPALAHFVPPPPDALPDTLAALEQFLHASQGQMPSLVKAALAHVQFETIHPFSDGNGRLGRLLITLILCSEG
VLREPSLYLSLYFKRRRADYYDRLNAVRLNGDWEGWLGFFLDGVAETAQQAVDTAQRLLALLARDRARIAALGQRAGNVG
LVFEQFARRVVLAVPQVAPHLSLSVPTIRAAVRTLQELDIVNELTGQQRHRIFAYQAYLDILSEGAQPL

Sequences:

>Translated_389_residues
MPHRTTGHYVAGALAGSRYQAFVPSPLPPEPALDFSLVALVARKELADQALGRLDGITLMLPDPELFLYQYVRKEALLSS
QIEGTQSSLSDLLLFEMDAAPGVPIDDVEEVSNYVAALNHGLRRLREDDFPLSLRLIREMHALLLQGGRGASKQPGEFRR
SQVWVGGASPALAHFVPPPPDALPDTLAALEQFLHASQGQMPSLVKAALAHVQFETIHPFSDGNGRLGRLLITLILCSEG
VLREPSLYLSLYFKRRRADYYDRLNAVRLNGDWEGWLGFFLDGVAETAQQAVDTAQRLLALLARDRARIAALGQRAGNVG
LVFEQFARRVVLAVPQVAPHLSLSVPTIRAAVRTLQELDIVNELTGQQRHRIFAYQAYLDILSEGAQPL
>Mature_388_residues
PHRTTGHYVAGALAGSRYQAFVPSPLPPEPALDFSLVALVARKELADQALGRLDGITLMLPDPELFLYQYVRKEALLSSQ
IEGTQSSLSDLLLFEMDAAPGVPIDDVEEVSNYVAALNHGLRRLREDDFPLSLRLIREMHALLLQGGRGASKQPGEFRRS
QVWVGGASPALAHFVPPPPDALPDTLAALEQFLHASQGQMPSLVKAALAHVQFETIHPFSDGNGRLGRLLITLILCSEGV
LREPSLYLSLYFKRRRADYYDRLNAVRLNGDWEGWLGFFLDGVAETAQQAVDTAQRLLALLARDRARIAALGQRAGNVGL
VFEQFARRVVLAVPQVAPHLSLSVPTIRAAVRTLQELDIVNELTGQQRHRIFAYQAYLDILSEGAQPL

Specific function: Unknown

COG id: COG3177

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 fido domain [H]

Homologues:

Organism=Homo sapiens, GI42794620, Length=216, Percent_Identity=31.0185185185185, Blast_Score=79, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17544594, Length=232, Percent_Identity=30.6034482758621, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24582217, Length=223, Percent_Identity=30.4932735426009, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003812 [H]

Pfam domain/function: PF02661 Fic [H]

EC number: NA

Molecular weight: Translated: 42845; Mature: 42714

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHRTTGHYVAGALAGSRYQAFVPSPLPPEPALDFSLVALVARKELADQALGRLDGITLM
CCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEE
LPDPELFLYQYVRKEALLSSQIEGTQSSLSDLLLFEMDAAPGVPIDDVEEVSNYVAALNH
ECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHH
GLRRLREDDFPLSLRLIREMHALLLQGGRGASKQPGEFRRSQVWVGGASPALAHFVPPPP
HHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCEEEECCCCCHHHCCCCCCC
DALPDTLAALEQFLHASQGQMPSLVKAALAHVQFETIHPFSDGNGRLGRLLITLILCSEG
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHCCC
VLREPSLYLSLYFKRRRADYYDRLNAVRLNGDWEGWLGFFLDGVAETAQQAVDTAQRLLA
CCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLARDRARIAALGQRAGNVGLVFEQFARRVVLAVPQVAPHLSLSVPTIRAAVRTLQELDI
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
VNELTGQQRHRIFAYQAYLDILSEGAQPL
HHHHCCHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PHRTTGHYVAGALAGSRYQAFVPSPLPPEPALDFSLVALVARKELADQALGRLDGITLM
CCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEE
LPDPELFLYQYVRKEALLSSQIEGTQSSLSDLLLFEMDAAPGVPIDDVEEVSNYVAALNH
ECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHH
GLRRLREDDFPLSLRLIREMHALLLQGGRGASKQPGEFRRSQVWVGGASPALAHFVPPPP
HHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCEEEECCCCCHHHCCCCCCC
DALPDTLAALEQFLHASQGQMPSLVKAALAHVQFETIHPFSDGNGRLGRLLITLILCSEG
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHCCC
VLREPSLYLSLYFKRRRADYYDRLNAVRLNGDWEGWLGFFLDGVAETAQQAVDTAQRLLA
CCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLARDRARIAALGQRAGNVGLVFEQFARRVVLAVPQVAPHLSLSVPTIRAAVRTLQELDI
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
VNELTGQQRHRIFAYQAYLDILSEGAQPL
HHHHCCHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]