| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is fabH [H]
Identifier: 21241007
GI number: 21241007
Start: 280846
End: 281862
Strand: Direct
Name: fabH [H]
Synonym: XAC0233
Alternate gene names: 21241007
Gene position: 280846-281862 (Clockwise)
Preceding gene: 21241006
Following gene: 21241008
Centisome position: 5.43
GC content: 64.6
Gene sequence:
>1017_bases ATGCTCTTCCAGAATGTCTCCATCGCGGGACTGGCGCATGTTGATGCGCCGCACACGCTGACTTCCAAGGAAATCAACGA ACGCCTGCAACCGACCTACGACCGCCTCGGGATCAAGACCGACGTGTTGGGCGACGTTGCCGGTATCCATGCACGGCGCT TGTGGGACCAGGATGTCCAGGCCTCGGACGCCGCCACCCAGGCCGCGCGCAAGGCGCTGATCGACGCCGGTATCGGCATC GAGAAGATCGGCCTGCTGGTCAACACCTCGGTGAGTCGCGACTACCTGGAGCCGTCCACGGCGTCCATCGTGTCCGGCAA CCTGGGCGTGGGCGACCACTGCGTTACCTTCGACGTGGCCAACGCCTGCCTCGCCTTCATCAATGGCATGGACATCGCCG CGCGCATGCTCGAGCGCGGCGAGATCGACTACGCCTTGGTCGTGGATGGCGAAACTGCCAACCTGGTGTACGAAAAGACC CTCGAGCGCATGACCTCGCCGGACGTCACCGAGGAGGAGTTCCGCAACGAACTTGCCGCGCTGACCCTGGGGTGCGGTGC AGCAGCCATGGTCATGGCGCGTACCGAGCTGGTGCCCGACGCCCCGCGCTACAAGGGCGGCGTGACCCGCTCGGCCACCG AGTGGAACAAGCTATGCCGGGGCAACCTGGACCGCATGGTCACCGATACCCGCTTGCTGTTGATCGAAGGCATCAAGTTG GCCCAGAAGACCTTCATGGCCGCGCGCCAGGTGCTGGGTTGGGCGGTGGACGAGCTGGACCAGTTCGTCATCCACCAGGT CAGCCGCCCCCACACCGCCGCCTTCGTGAAGTCGTTCGGCATCGACCCGGCCAAGGTCATGACCATCTTCGGCGAGCACG GAAACATCGGTCCGGCCTCGGTGCCGATCGTGTTGAGCAAGCTCAAGGAGCTGGGCCGCCTGAAGAAGGGCGACCGCATC GCGCTGCTGGGCATCGGCTCGGGCTTGAATTGCTCGATGGCGGAAGTGGTTTGGTGA
Upstream 100 bases:
>100_bases CCGTTGGGCTGGGGCGCAGGCGTTTCAAATGTAAAGATGCGGTAAAACCAGCCAGCGGCTAGACTAGCGCCCCCTCGCCT GACGCCATGGCGCTACTTCG
Downstream 100 bases:
>100_bases TGCGTGGTTGCACGGCATGCCTTGCTGCATGCCGTGCAACCTCGCCGCTTAAGAAAAAAAGTGCTATCTAAGTTTCCTTG CAAGAACCATTGCTGCCTGT
Product: 3-oxoacyl-(acyl carrier protein) synthase III
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III [H]
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MLFQNVSIAGLAHVDAPHTLTSKEINERLQPTYDRLGIKTDVLGDVAGIHARRLWDQDVQASDAATQAARKALIDAGIGI EKIGLLVNTSVSRDYLEPSTASIVSGNLGVGDHCVTFDVANACLAFINGMDIAARMLERGEIDYALVVDGETANLVYEKT LERMTSPDVTEEEFRNELAALTLGCGAAAMVMARTELVPDAPRYKGGVTRSATEWNKLCRGNLDRMVTDTRLLLIEGIKL AQKTFMAARQVLGWAVDELDQFVIHQVSRPHTAAFVKSFGIDPAKVMTIFGEHGNIGPASVPIVLSKLKELGRLKKGDRI ALLGIGSGLNCSMAEVVW
Sequences:
>Translated_338_residues MLFQNVSIAGLAHVDAPHTLTSKEINERLQPTYDRLGIKTDVLGDVAGIHARRLWDQDVQASDAATQAARKALIDAGIGI EKIGLLVNTSVSRDYLEPSTASIVSGNLGVGDHCVTFDVANACLAFINGMDIAARMLERGEIDYALVVDGETANLVYEKT LERMTSPDVTEEEFRNELAALTLGCGAAAMVMARTELVPDAPRYKGGVTRSATEWNKLCRGNLDRMVTDTRLLLIEGIKL AQKTFMAARQVLGWAVDELDQFVIHQVSRPHTAAFVKSFGIDPAKVMTIFGEHGNIGPASVPIVLSKLKELGRLKKGDRI ALLGIGSGLNCSMAEVVW >Mature_338_residues MLFQNVSIAGLAHVDAPHTLTSKEINERLQPTYDRLGIKTDVLGDVAGIHARRLWDQDVQASDAATQAARKALIDAGIGI EKIGLLVNTSVSRDYLEPSTASIVSGNLGVGDHCVTFDVANACLAFINGMDIAARMLERGEIDYALVVDGETANLVYEKT LERMTSPDVTEEEFRNELAALTLGCGAAAMVMARTELVPDAPRYKGGVTRSATEWNKLCRGNLDRMVTDTRLLLIEGIKL AQKTFMAARQVLGWAVDELDQFVIHQVSRPHTAAFVKSFGIDPAKVMTIFGEHGNIGPASVPIVLSKLKELGRLKKGDRI ALLGIGSGLNCSMAEVVW
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family [H]
Homologues:
Organism=Escherichia coli, GI1787333, Length=295, Percent_Identity=27.4576271186441, Blast_Score=80, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C [H]
EC number: =2.3.1.41 [H]
Molecular weight: Translated: 36543; Mature: 36543
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFQNVSIAGLAHVDAPHTLTSKEINERLQPTYDRLGIKTDVLGDVAGIHARRLWDQDVQ CCCCCCCEEEEEECCCCCCCCHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCC ASDAATQAARKALIDAGIGIEKIGLLVNTSVSRDYLEPSTASIVSGNLGVGDHCVTFDVA HHHHHHHHHHHHHHHCCCCHHHHHEEEECCCCHHHCCCCCHHHEECCCCCCCCCHHHHHH NACLAFINGMDIAARMLERGEIDYALVVDGETANLVYEKTLERMTSPDVTEEEFRNELAA HHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH LTLGCGAAAMVMARTELVPDAPRYKGGVTRSATEWNKLCRGNLDRMVTDTRLLLIEGIKL HHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH AQKTFMAARQVLGWAVDELDQFVIHQVSRPHTAAFVKSFGIDPAKVMTIFGEHGNIGPAS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHEEECCCCCCCCHH VPIVLSKLKELGRLKKGDRIALLGIGSGLNCSMAEVVW HHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHCC >Mature Secondary Structure MLFQNVSIAGLAHVDAPHTLTSKEINERLQPTYDRLGIKTDVLGDVAGIHARRLWDQDVQ CCCCCCCEEEEEECCCCCCCCHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCC ASDAATQAARKALIDAGIGIEKIGLLVNTSVSRDYLEPSTASIVSGNLGVGDHCVTFDVA HHHHHHHHHHHHHHHCCCCHHHHHEEEECCCCHHHCCCCCHHHEECCCCCCCCCHHHHHH NACLAFINGMDIAARMLERGEIDYALVVDGETANLVYEKTLERMTSPDVTEEEFRNELAA HHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH LTLGCGAAAMVMARTELVPDAPRYKGGVTRSATEWNKLCRGNLDRMVTDTRLLLIEGIKL HHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH AQKTFMAARQVLGWAVDELDQFVIHQVSRPHTAAFVKSFGIDPAKVMTIFGEHGNIGPAS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHEEECCCCCCCCHH VPIVLSKLKELGRLKKGDRIALLGIGSGLNCSMAEVVW HHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA