| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is cls [C]
Identifier: 21240969
GI number: 21240969
Start: 239550
End: 241568
Strand: Direct
Name: cls [C]
Synonym: XAC0195
Alternate gene names: 21240969
Gene position: 239550-241568 (Clockwise)
Preceding gene: 21240968
Following gene: 21240970
Centisome position: 4.63
GC content: 65.92
Gene sequence:
>2019_bases GTGACGTATCTGTTGAGGGTTTGCGTGCTGGCAACGTTGTTGCTCGGCACCGGATGCGCCAGCCTGTCACAAACCGAACG CAACCGTGCCGCCGGTGTCGCCGCTGCGGCACGCAGCACGGTGGTCAATTGCACCCAGGCCAATCGCTGTGCGCAACCCT CGCCATTGCGCGCGCTGGGCGGCGAAGCGATCACCGCCTCCACACCAGGAGCGCCGCGGCATTACGCCACCATCGTCGAC CATGGCGAAGAATCGCTGGTGGCCCGGCTCAACCTGATCCGCAGCGCCACCCGCAGCATCGATCTGCAGACCTACATTTT CGATAAGGACGACAGCGCGCGCATGGTGCTGGACGCACTGGTGGACGCCGCCCAGCGCGGGGTCAAGGTGCGCATCCTGA TCGATCAGTTGTCGGCGATCGCCGATCTGCAGATTCTCGGTGCGCTCGCCAGCAGCCATGAAAACCTGCAGCTGCGCATC TACAACCCCACCTTCGGCAAGGTCAAGCTCAATTACTTCGATTATGCTGGCAGCGTGCTGTGTTGCTTCCGCCGCTTCAA CCAGCGCATGCACAACAAGCTGCTGGTGGTGGACGACGTGCTGGGCGTGGTCGGTGGGCGCAATTACCAGGACGACTATT ACGACTGGGACAGCGAGTACAACTTCCGCGACCGCGACGTGATTCTGGCCGGGCCGGAAGTGCGCGCCATGGCCGCCAAT TTCGATGCGTTCTGGCGTGCCCGGCGCAGCGTACCGGCCGAGCGTCTGAACGATGTCGGGCGCCTGCTGCTGGAGCAGGG CGTGCCGACGATGCCGCCGGCCGAGTTCCGCCGGCCCGACCGGGTGGCGCGAGTGGACCGCGAAGCGCACGACCCGCAAT TCGTGCGCGACGCCTTCGTGACCCCGGCCATGCCGGTGAAGCGTGTGCTGTACGTGGCCGATCTGCCGCAAAAACACCGC CGGGAACATGCGGCCAAGGCAGTGTCCACGGCGCCGGAACTGGATGGCCTGATTGCCGGCGCGCAGCAGGAAGTGCTGCT GCAGACCCCCTACCTGGTCTTGTCCGACCAGGCGCAGGCGATCTTCCGCACGTTGCGCAAACACCCGCAGCCGCCGCGCA TCGTGGTGTCGACCAATAGCCTGGCCGCCACCGACAACCCCATCGTGTATGCGCTGTCGTACAAGTTCAAACGCCGCAAC ATGCGCGAGCTGGGCTTCAATGTGTACGAGTTCAAGCCGTTTCCGCTCGATGCCCCGGTGGATTACGCCAACCTGGTGAC GGACCCGCTCAACCCCGCCTCCGACGTCAATCAGGACAGCCGCAACAATCGCCTGATCGGCGGCAGCGCAGCGGGCAATG CGATGCGCGGCAGCAGCGGCCCGGAGGGCAACGCCAGCGCGAGCGCCGGCAGCGTGCTGCGCGGCAGTGGTGGCGGCCGT GCGCCGGGCGGGAGCGAAGTCGATCGGCGCGTGTTGCGGACCGAAACGCGGCCCTCGTTCCTGGGCACGCGCGCGGTCAA CAAGCCGCTGCCGGTGACCCGCGCCGGTGCGCGGATGGGCTTGCATGCCAAGTCGTTGGTGGTGGATCGCCGCATCGGCG TGATCGGGACGCACAACTTCGACCCGCGCAGCGAAAACTACAACACCGAAGCGGCCGTGGTGATCGACGATGCGCGCTTT GCGCAGGCGTTGGCTGCCAGCATCGAACGCGACATCGCTCCGGAAAATGCGTGGACGGTGGCGCCGCGCGAAAAGCCGCC GGTGCTGAGCGGGTTGAACTACAGCGTGGGCAAGGTCTCCGAAGCCTTGCCGGTGCTGGACTTCTGGCCATGGCGCTACG CCACCAACTACCAGTTCCAGCCCGGCCCGGATTGTCCGTTTCCGCTCAAGCGGCAGGACCCGCAGTTCCGCCAGTGCTAT GTGGCGGTGGGCGATTTCCCGGAGGTCAATGTCGGCCCGAAGTGGCTGCTGGTGCGCATGCTGACCGCTTTCGGCGCCGG GCTGGTACCGATTCTCTGA
Upstream 100 bases:
>100_bases CGGTCCTGCGTGGACGTTACGGAATGAATGCGTGGCAGATGGCCCTGGGCGACAGGGTGACGTTCATTCTGCGTGGGCGC TTGCAGGAGGCGCGGCGTCC
Downstream 100 bases:
>100_bases TCGGCTGGCGTGCCACGCAGGTCGCAGCAGCGGATGCCTGACCGTGCAGCACGTTGTGGTTGGATGGACGCAGTTTGGCT GCGGATCGGCTCCTGGACGC
Product: cardiolipin synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 672; Mature: 671
Protein sequence:
>672_residues MTYLLRVCVLATLLLGTGCASLSQTERNRAAGVAAAARSTVVNCTQANRCAQPSPLRALGGEAITASTPGAPRHYATIVD HGEESLVARLNLIRSATRSIDLQTYIFDKDDSARMVLDALVDAAQRGVKVRILIDQLSAIADLQILGALASSHENLQLRI YNPTFGKVKLNYFDYAGSVLCCFRRFNQRMHNKLLVVDDVLGVVGGRNYQDDYYDWDSEYNFRDRDVILAGPEVRAMAAN FDAFWRARRSVPAERLNDVGRLLLEQGVPTMPPAEFRRPDRVARVDREAHDPQFVRDAFVTPAMPVKRVLYVADLPQKHR REHAAKAVSTAPELDGLIAGAQQEVLLQTPYLVLSDQAQAIFRTLRKHPQPPRIVVSTNSLAATDNPIVYALSYKFKRRN MRELGFNVYEFKPFPLDAPVDYANLVTDPLNPASDVNQDSRNNRLIGGSAAGNAMRGSSGPEGNASASAGSVLRGSGGGR APGGSEVDRRVLRTETRPSFLGTRAVNKPLPVTRAGARMGLHAKSLVVDRRIGVIGTHNFDPRSENYNTEAAVVIDDARF AQALAASIERDIAPENAWTVAPREKPPVLSGLNYSVGKVSEALPVLDFWPWRYATNYQFQPGPDCPFPLKRQDPQFRQCY VAVGDFPEVNVGPKWLLVRMLTAFGAGLVPIL
Sequences:
>Translated_672_residues MTYLLRVCVLATLLLGTGCASLSQTERNRAAGVAAAARSTVVNCTQANRCAQPSPLRALGGEAITASTPGAPRHYATIVD HGEESLVARLNLIRSATRSIDLQTYIFDKDDSARMVLDALVDAAQRGVKVRILIDQLSAIADLQILGALASSHENLQLRI YNPTFGKVKLNYFDYAGSVLCCFRRFNQRMHNKLLVVDDVLGVVGGRNYQDDYYDWDSEYNFRDRDVILAGPEVRAMAAN FDAFWRARRSVPAERLNDVGRLLLEQGVPTMPPAEFRRPDRVARVDREAHDPQFVRDAFVTPAMPVKRVLYVADLPQKHR REHAAKAVSTAPELDGLIAGAQQEVLLQTPYLVLSDQAQAIFRTLRKHPQPPRIVVSTNSLAATDNPIVYALSYKFKRRN MRELGFNVYEFKPFPLDAPVDYANLVTDPLNPASDVNQDSRNNRLIGGSAAGNAMRGSSGPEGNASASAGSVLRGSGGGR APGGSEVDRRVLRTETRPSFLGTRAVNKPLPVTRAGARMGLHAKSLVVDRRIGVIGTHNFDPRSENYNTEAAVVIDDARF AQALAASIERDIAPENAWTVAPREKPPVLSGLNYSVGKVSEALPVLDFWPWRYATNYQFQPGPDCPFPLKRQDPQFRQCY VAVGDFPEVNVGPKWLLVRMLTAFGAGLVPIL >Mature_671_residues TYLLRVCVLATLLLGTGCASLSQTERNRAAGVAAAARSTVVNCTQANRCAQPSPLRALGGEAITASTPGAPRHYATIVDH GEESLVARLNLIRSATRSIDLQTYIFDKDDSARMVLDALVDAAQRGVKVRILIDQLSAIADLQILGALASSHENLQLRIY NPTFGKVKLNYFDYAGSVLCCFRRFNQRMHNKLLVVDDVLGVVGGRNYQDDYYDWDSEYNFRDRDVILAGPEVRAMAANF DAFWRARRSVPAERLNDVGRLLLEQGVPTMPPAEFRRPDRVARVDREAHDPQFVRDAFVTPAMPVKRVLYVADLPQKHRR EHAAKAVSTAPELDGLIAGAQQEVLLQTPYLVLSDQAQAIFRTLRKHPQPPRIVVSTNSLAATDNPIVYALSYKFKRRNM RELGFNVYEFKPFPLDAPVDYANLVTDPLNPASDVNQDSRNNRLIGGSAAGNAMRGSSGPEGNASASAGSVLRGSGGGRA PGGSEVDRRVLRTETRPSFLGTRAVNKPLPVTRAGARMGLHAKSLVVDRRIGVIGTHNFDPRSENYNTEAAVVIDDARFA QALAASIERDIAPENAWTVAPREKPPVLSGLNYSVGKVSEALPVLDFWPWRYATNYQFQPGPDCPFPLKRQDPQFRQCYV AVGDFPEVNVGPKWLLVRMLTAFGAGLVPIL
Specific function: Unknown
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PLD phosphodiesterase domains [H]
Homologues:
Organism=Escherichia coli, GI87081826, Length=334, Percent_Identity=30.8383233532934, Blast_Score=115, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001736 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73882; Mature: 73751
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYLLRVCVLATLLLGTGCASLSQTERNRAAGVAAAARSTVVNCTQANRCAQPSPLRALG CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECHHCCCCCCCCCHHHHC GEAITASTPGAPRHYATIVDHGEESLVARLNLIRSATRSIDLQTYIFDKDDSARMVLDAL CCEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHH VDAAQRGVKVRILIDQLSAIADLQILGALASSHENLQLRIYNPTFGKVKLNYFDYAGSVL HHHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEHHHHHHH CCFRRFNQRMHNKLLVVDDVLGVVGGRNYQDDYYDWDSEYNFRDRDVILAGPEVRAMAAN HHHHHHHHHHHCCEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEHHC FDAFWRARRSVPAERLNDVGRLLLEQGVPTMPPAEFRRPDRVARVDREAHDPQFVRDAFV HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHCCCHHHHHHHHC TPAMPVKRVLYVADLPQKHRREHAAKAVSTAPELDGLIAGAQQEVLLQTPYLVLSDQAQA CCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHEECCEEEECCCHHH IFRTLRKHPQPPRIVVSTNSLAATDNPIVYALSYKFKRRNMRELGFNVYEFKPFPLDAPV HHHHHHHCCCCCEEEEECCCEEECCCCEEEEEEEHHHHCCHHHHCCCEEEECCCCCCCCC DYANLVTDPLNPASDVNQDSRNNRLIGGSAAGNAMRGSSGPEGNASASAGSVLRGSGGGR CHHHHHCCCCCCHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC APGGSEVDRRVLRTETRPSFLGTRAVNKPLPVTRAGARMGLHAKSLVVDRRIGVIGTHNF CCCCHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEECCCC DPRSENYNTEAAVVIDDARFAQALAASIERDIAPENAWTVAPREKPPVLSGLNYSVGKVS CCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCHHHHH EALPVLDFWPWRYATNYQFQPGPDCPFPLKRQDPQFRQCYVAVGDFPEVNVGPKWLLVRM HHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHH LTAFGAGLVPIL HHHHCCCCCCCC >Mature Secondary Structure TYLLRVCVLATLLLGTGCASLSQTERNRAAGVAAAARSTVVNCTQANRCAQPSPLRALG HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECHHCCCCCCCCCHHHHC GEAITASTPGAPRHYATIVDHGEESLVARLNLIRSATRSIDLQTYIFDKDDSARMVLDAL CCEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHH VDAAQRGVKVRILIDQLSAIADLQILGALASSHENLQLRIYNPTFGKVKLNYFDYAGSVL HHHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEHHHHHHH CCFRRFNQRMHNKLLVVDDVLGVVGGRNYQDDYYDWDSEYNFRDRDVILAGPEVRAMAAN HHHHHHHHHHHCCEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEHHC FDAFWRARRSVPAERLNDVGRLLLEQGVPTMPPAEFRRPDRVARVDREAHDPQFVRDAFV HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHCCCHHHHHHHHC TPAMPVKRVLYVADLPQKHRREHAAKAVSTAPELDGLIAGAQQEVLLQTPYLVLSDQAQA CCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHEECCEEEECCCHHH IFRTLRKHPQPPRIVVSTNSLAATDNPIVYALSYKFKRRNMRELGFNVYEFKPFPLDAPV HHHHHHHCCCCCEEEEECCCEEECCCCEEEEEEEHHHHCCHHHHCCCEEEECCCCCCCCC DYANLVTDPLNPASDVNQDSRNNRLIGGSAAGNAMRGSSGPEGNASASAGSVLRGSGGGR CHHHHHCCCCCCHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC APGGSEVDRRVLRTETRPSFLGTRAVNKPLPVTRAGARMGLHAKSLVVDRRIGVIGTHNF CCCCHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEECCCC DPRSENYNTEAAVVIDDARFAQALAASIERDIAPENAWTVAPREKPPVLSGLNYSVGKVS CCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCHHHHH EALPVLDFWPWRYATNYQFQPGPDCPFPLKRQDPQFRQCYVAVGDFPEVNVGPKWLLVRM HHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHH LTAFGAGLVPIL HHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]