| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21240968
Identifier: 21240968
GI number: 21240968
Start: 238981
End: 239553
Strand: Direct
Name: 21240968
Synonym: XAC0194
Alternate gene names: NA
Gene position: 238981-239553 (Clockwise)
Preceding gene: 21240967
Following gene: 21240969
Centisome position: 4.62
GC content: 63.18
Gene sequence:
>573_bases GTGTCATCGTCGCTGCGCTGGTACGCCTGGCTCGCGCTCTGGGTCGTGTTCCCCTGCATGGCGCAGCAGAAGGTGCAGTC CATCGACCCGGCGCAATCGCGCTTCGGGTTCGAGATCAAGACGCGCTTCGGGACGAAGATCGAGGGGTTTTTCCCGCGTT TTCGCGGTGACGTAGTGACGTTGGCCGATGGGCGTCAGCAGGTGCGTTTCCGGCTGGACGCCACTCAGGTGGAGATCCCC GGCAAGGACCGGTACACCAGCTGGATGCGCGGCGAAGATTTTTTCGACGTTGCGCAGTACCCGGTCGTCGAATTCGAGTC GCTGCCGTATGTCGACGAAGTGGTGAAGCAGGGGGGCGACATCGTCGGCAACCTGACCATCCGCGGAATCACGCATCTGG AAACGCTGCATGTGGTGCCGGCCGAATGCACGCGGCCGGGCTATGATTGCGACGTGATCAGTCGAGGGACGGTCCTGCGT GGACGTTACGGAATGAATGCGTGGCAGATGGCCCTGGGCGACAGGGTGACGTTCATTCTGCGTGGGCGCTTGCAGGAGGC GCGGCGTCCGTGA
Upstream 100 bases:
>100_bases CGGCATGCCCACCGCCTCGATCGCGTTGCTGGCATTGCCGCTGGACGCCACCATCGAGCCGGGCATCGCCCGCCTGACCG CCTTCTGGTGGCCTTGATCC
Downstream 100 bases:
>100_bases CGTATCTGTTGAGGGTTTGCGTGCTGGCAACGTTGTTGCTCGGCACCGGATGCGCCAGCCTGTCACAAACCGAACGCAAC CGTGCCGCCGGTGTCGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MSSSLRWYAWLALWVVFPCMAQQKVQSIDPAQSRFGFEIKTRFGTKIEGFFPRFRGDVVTLADGRQQVRFRLDATQVEIP GKDRYTSWMRGEDFFDVAQYPVVEFESLPYVDEVVKQGGDIVGNLTIRGITHLETLHVVPAECTRPGYDCDVISRGTVLR GRYGMNAWQMALGDRVTFILRGRLQEARRP
Sequences:
>Translated_190_residues MSSSLRWYAWLALWVVFPCMAQQKVQSIDPAQSRFGFEIKTRFGTKIEGFFPRFRGDVVTLADGRQQVRFRLDATQVEIP GKDRYTSWMRGEDFFDVAQYPVVEFESLPYVDEVVKQGGDIVGNLTIRGITHLETLHVVPAECTRPGYDCDVISRGTVLR GRYGMNAWQMALGDRVTFILRGRLQEARRP >Mature_189_residues SSSLRWYAWLALWVVFPCMAQQKVQSIDPAQSRFGFEIKTRFGTKIEGFFPRFRGDVVTLADGRQQVRFRLDATQVEIPG KDRYTSWMRGEDFFDVAQYPVVEFESLPYVDEVVKQGGDIVGNLTIRGITHLETLHVVPAECTRPGYDCDVISRGTVLRG RYGMNAWQMALGDRVTFILRGRLQEARRP
Specific function: Unknown
COG id: COG2353
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21816; Mature: 21685
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSLRWYAWLALWVVFPCMAQQKVQSIDPAQSRFGFEIKTRFGTKIEGFFPRFRGDVVT CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCEEEEECCCCCCCCCCHHHCCCEEE LADGRQQVRFRLDATQVEIPGKDRYTSWMRGEDFFDVAQYPVVEFESLPYVDEVVKQGGD EECCCEEEEEEECCEEEECCCCCCHHHHCCCCCCHHHHHCCCEEECCCCCHHHHHHCCCC IVGNLTIRGITHLETLHVVPAECTRPGYDCDVISRGTVLRGRYGMNAWQMALGDRVTFIL EEEEEEEEEEEEEEEEEECCHHHCCCCCCCCEECCCCEEECCCCCCHHHHHHCCCEEEEE RGRLQEARRP EHHHHHCCCC >Mature Secondary Structure SSSLRWYAWLALWVVFPCMAQQKVQSIDPAQSRFGFEIKTRFGTKIEGFFPRFRGDVVT CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCEEEEECCCCCCCCCCHHHCCCEEE LADGRQQVRFRLDATQVEIPGKDRYTSWMRGEDFFDVAQYPVVEFESLPYVDEVVKQGGD EECCCEEEEEEECCEEEECCCCCCHHHHCCCCCCHHHHHCCCEEECCCCCHHHHHHCCCC IVGNLTIRGITHLETLHVVPAECTRPGYDCDVISRGTVLRGRYGMNAWQMALGDRVTFIL EEEEEEEEEEEEEEEEEECCHHHCCCCCCCCEECCCCEEECCCCCCHHHHHHCCCEEEEE RGRLQEARRP EHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA