Click here to switch to the map view.

The map label for this gene is ydiI [C]

Identifier: 21240970

GI number: 21240970

Start: 241932

End: 242360

Strand: Direct

Name: ydiI [C]

Synonym: XAC0196

Alternate gene names: 21240970

Gene position: 241932-242360 (Clockwise)

Preceding gene: 21240969

Following gene: 21240971

Centisome position: 4.67

GC content: 65.27

Gene sequence:

>429_bases
ATGACCTTCCGCGAACCCGTCGATCTAGCCGCCCTCAATGCCGCCAGCCGCGATACCTTGATCGAGCATCTGGGCATCGT
CTTCACCGAGGCCGGTGACGATTGGCTGCGCGCCACCATGCCGGTGGATGCGCGTACCAGGCAGCCCTATGGCCTGCTGC
ACGGTGGCGCCTCGGTGGTGCTGGCCGAGACGGTGGGCAGCAGCGCCGGCAACCTGTGCGTGGATATGACGACCCAGATC
TGCGTGGGCCTGGAGATCAATGCCAATCACCTGCGCGCTGCCACCCAGGGGCTGGTGATCGGCACTGCGCGGGCGGTACA
TGTGGGGCGTAGCACGCATGTCTGGGACATCACCATCGAAAACCCGGCCGGCAAACGCGTCTGTGTGTCGCGATTGACCC
TGGCGGTGGTTCCACGCAGCAATGGCTGA

Upstream 100 bases:

>100_bases
TCCCGCTTCCCGCTTCCCGCTTCCCGCTTCCCCATTCCCCATTCCCCATTCCCCATTCCCCATTCCCCATTCCCCATTCC
CCATTCCCCATTCCCAGCCC

Downstream 100 bases:

>100_bases
GCTCGCCCGGCAGCGGCATGCATGGAACAGCGTCATCCGCTGCCGGCACTGCGCGGCGGCCACGCTGCTGTCACAATGGT
TGCGCCTCCTTCCCCCGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MTFREPVDLAALNAASRDTLIEHLGIVFTEAGDDWLRATMPVDARTRQPYGLLHGGASVVLAETVGSSAGNLCVDMTTQI
CVGLEINANHLRAATQGLVIGTARAVHVGRSTHVWDITIENPAGKRVCVSRLTLAVVPRSNG

Sequences:

>Translated_142_residues
MTFREPVDLAALNAASRDTLIEHLGIVFTEAGDDWLRATMPVDARTRQPYGLLHGGASVVLAETVGSSAGNLCVDMTTQI
CVGLEINANHLRAATQGLVIGTARAVHVGRSTHVWDITIENPAGKRVCVSRLTLAVVPRSNG
>Mature_141_residues
TFREPVDLAALNAASRDTLIEHLGIVFTEAGDDWLRATMPVDARTRQPYGLLHGGASVVLAETVGSSAGNLCVDMTTQIC
VGLEINANHLRAATQGLVIGTARAVHVGRSTHVWDITIENPAGKRVCVSRLTLAVVPRSNG

Specific function: Unknown

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thioesterase PaaI family [H]

Homologues:

Organism=Escherichia coli, GI1787976, Length=137, Percent_Identity=50.3649635036496, Blast_Score=138, Evalue=1e-34,
Organism=Escherichia coli, GI1786813, Length=137, Percent_Identity=47.4452554744526, Blast_Score=127, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003736
- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 15054; Mature: 14923

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFREPVDLAALNAASRDTLIEHLGIVFTEAGDDWLRATMPVDARTRQPYGLLHGGASVV
CCCCCCCCEEEECCCCHHHHHHHHCEEEEECCCCEEEEECCCCCCCCCCCEEEECCCEEE
LAETVGSSAGNLCVDMTTQICVGLEINANHLRAATQGLVIGTARAVHVGRSTHVWDITIE
EEECCCCCCCCEEEEECCEEEEEEEECCHHHHHHHCCEEEECEEEEEECCCCEEEEEEEE
NPAGKRVCVSRLTLAVVPRSNG
CCCCCCEEEEEEEEEEEECCCC
>Mature Secondary Structure 
TFREPVDLAALNAASRDTLIEHLGIVFTEAGDDWLRATMPVDARTRQPYGLLHGGASVV
CCCCCCCEEEECCCCHHHHHHHHCEEEEECCCCEEEEECCCCCCCCCCCEEEECCCEEE
LAETVGSSAGNLCVDMTTQICVGLEINANHLRAATQGLVIGTARAVHVGRSTHVWDITIE
EEECCCCCCCCEEEEECCEEEEEEEECCHHHHHHHCCEEEECEEEEEECCCCEEEEEEEE
NPAGKRVCVSRLTLAVVPRSNG
CCCCCCEEEEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]