Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

Click here to switch to the map view.

The map label for this gene is 21240822

Identifier: 21240822

GI number: 21240822

Start: 58280

End: 59671

Strand: Reverse

Name: 21240822

Synonym: XAC0048

Alternate gene names: NA

Gene position: 59671-58280 (Counterclockwise)

Preceding gene: 21240823

Following gene: 21240821

Centisome position: 1.15

GC content: 67.89

Gene sequence:

>1392_bases
TTGGCTGCAGCAGACCTTCGCGGCCGATGCGCGATGGCCGCACCATCTGGAAGCGACCCCGTGAAACGCGCCTATCTGCT
GCTGGCGGTGCTGCTGGCGATCCACCTGGGCGATCTGCTGGTGGCCTGGCTGTACCACGGCGGGGCGCTGCCGGCGGCCG
CCCTGCTGCGGCCGATGCGCGATGGCACGCTCATCGTGCTGGCCGCCATTGCACTGGCGACGGTGCGCATGCCGCGCGCC
TTGCTGGCGATAATCCTGGTGTTCGGCATGATCGGGCTGGCCTATGCGCCGGTCGGATACGCCCACGGGTTGCCGGCCGG
CATCGTGGTCGGCTCGCTTGGCACCTTGCTGCTGCCGATGCTGCTGGTGCTTGCCGGGTATTGGTGCATGCCGCATCCGC
ACGATGTCAGGCGCGGGGCGCGCTGGCTGGTCTGGTTGGGCATCGTCAGTGCTCTGTTCGGTGCGTGGGACTTGGCGCAT
ACCGATTTCTGGGTGCAGACCGTGCGGTTGCCGGACTACTTGGCCGAGGTGAAAGGCGTGCTTCCCAAGGACACCGACCC
GGACACCGGGCTGCCATGGAACTTCTTCGGCGGCGAGGATTACGCGCGCCGTGCCGGTGGACTGGTGGCAGCTCCCCTGG
CGCAGGGCCAGTTCCTGATTACCGCGGCACTGGCGGCACTGGGTCTGTGGCAGCGGCGCTGGCCGTGGCGCGCCCTGCTT
ACGTGCCTGGGCTTGCTGGTGGGGGTGTGGATGTCGGGCACACGGGGCGCCATGCTGGCCGGCATCGTCGGGGTGCTGGG
CTACCTGGTCAGCTCACGCGGGCTGGTGCGATCGCCCTGGGCGCGGCTGCTGCTGGTGGGCGGAATCGCGGCGATGCTGG
CGGCCGCGTCCTACGGCATTGTGGTGACGTCGGTGAATTTCCGCGACGGCTCCACCATCGGCCACTGGTACGCGCTGCAG
CGCAATCTGGCCGATCTGCACCAAGTGGTCCTGTGGGGCGGCGGGCTGGGTCGCCAGGGGGCGGTTGCTGCGCGTCAGGC
GTTGACCGATCTGGGCGGTGGCGAAGGTGCCATCTTTACCATCGCGTATCAGATGGGGTTACCGACGGCCCTGCTGTTTC
TGGGCTTTATCGGCTGGAGCCTGCGCGCGCTCTGGCGCGCCTATCGCCAACGCGACAATCACCTGGCATTGGCGATGTTC
TGGCTGTTGTGCGGCATGGCGACAACCTTGATCTCGTCCGACAACGCAATGACCGTGTCTGGCGCTGGGGGGTTCTGGTT
GCTACTGGGCGGCGCGTTGCGTCATTGCCAATGTCCGCTGCCAACCCGACGAGCGATCGTGCGTACACGCAGGGACCACA
CCGCGCCCGCCGCCGGCATGGCCGCAGGTTGA

Upstream 100 bases:

>100_bases
CCGCACATCAGGTCGCCGATGCCGACGCGCTGGCTGCACTGGTCCGGGCGCTGCGCAGCGATGCGGGTGCGCGAGCGCGA
TTCGCCGCGCAGCAACGCCA

Downstream 100 bases:

>100_bases
GCGATGCGTATCCTGCACGTCTATAAGGATTTCGCGCCGCACAGCGGCGGCGGCGGGGTGGCGCGGCACATCCATGGGCT
GGCAGTGACCCTTGCCGATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 463; Mature: 462

Protein sequence:

>463_residues
MAAADLRGRCAMAAPSGSDPVKRAYLLLAVLLAIHLGDLLVAWLYHGGALPAAALLRPMRDGTLIVLAAIALATVRMPRA
LLAIILVFGMIGLAYAPVGYAHGLPAGIVVGSLGTLLLPMLLVLAGYWCMPHPHDVRRGARWLVWLGIVSALFGAWDLAH
TDFWVQTVRLPDYLAEVKGVLPKDTDPDTGLPWNFFGGEDYARRAGGLVAAPLAQGQFLITAALAALGLWQRRWPWRALL
TCLGLLVGVWMSGTRGAMLAGIVGVLGYLVSSRGLVRSPWARLLLVGGIAAMLAAASYGIVVTSVNFRDGSTIGHWYALQ
RNLADLHQVVLWGGGLGRQGAVAARQALTDLGGGEGAIFTIAYQMGLPTALLFLGFIGWSLRALWRAYRQRDNHLALAMF
WLLCGMATTLISSDNAMTVSGAGGFWLLLGGALRHCQCPLPTRRAIVRTRRDHTAPAAGMAAG

Sequences:

>Translated_463_residues
MAAADLRGRCAMAAPSGSDPVKRAYLLLAVLLAIHLGDLLVAWLYHGGALPAAALLRPMRDGTLIVLAAIALATVRMPRA
LLAIILVFGMIGLAYAPVGYAHGLPAGIVVGSLGTLLLPMLLVLAGYWCMPHPHDVRRGARWLVWLGIVSALFGAWDLAH
TDFWVQTVRLPDYLAEVKGVLPKDTDPDTGLPWNFFGGEDYARRAGGLVAAPLAQGQFLITAALAALGLWQRRWPWRALL
TCLGLLVGVWMSGTRGAMLAGIVGVLGYLVSSRGLVRSPWARLLLVGGIAAMLAAASYGIVVTSVNFRDGSTIGHWYALQ
RNLADLHQVVLWGGGLGRQGAVAARQALTDLGGGEGAIFTIAYQMGLPTALLFLGFIGWSLRALWRAYRQRDNHLALAMF
WLLCGMATTLISSDNAMTVSGAGGFWLLLGGALRHCQCPLPTRRAIVRTRRDHTAPAAGMAAG
>Mature_462_residues
AAADLRGRCAMAAPSGSDPVKRAYLLLAVLLAIHLGDLLVAWLYHGGALPAAALLRPMRDGTLIVLAAIALATVRMPRAL
LAIILVFGMIGLAYAPVGYAHGLPAGIVVGSLGTLLLPMLLVLAGYWCMPHPHDVRRGARWLVWLGIVSALFGAWDLAHT
DFWVQTVRLPDYLAEVKGVLPKDTDPDTGLPWNFFGGEDYARRAGGLVAAPLAQGQFLITAALAALGLWQRRWPWRALLT
CLGLLVGVWMSGTRGAMLAGIVGVLGYLVSSRGLVRSPWARLLLVGGIAAMLAAASYGIVVTSVNFRDGSTIGHWYALQR
NLADLHQVVLWGGGLGRQGAVAARQALTDLGGGEGAIFTIAYQMGLPTALLFLGFIGWSLRALWRAYRQRDNHLALAMFW
LLCGMATTLISSDNAMTVSGAGGFWLLLGGALRHCQCPLPTRRAIVRTRRDHTAPAAGMAAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49283; Mature: 49152

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAADLRGRCAMAAPSGSDPVKRAYLLLAVLLAIHLGDLLVAWLYHGGALPAAALLRPMR
CCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC
DGTLIVLAAIALATVRMPRALLAIILVFGMIGLAYAPVGYAHGLPAGIVVGSLGTLLLPM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHH
LLVLAGYWCMPHPHDVRRGARWLVWLGIVSALFGAWDLAHTDFWVQTVRLPDYLAEVKGV
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
LPKDTDPDTGLPWNFFGGEDYARRAGGLVAAPLAQGQFLITAALAALGLWQRRWPWRALL
CCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEHHCCCHHHHHHHHHHHHHHHHCCCHHHHH
TCLGLLVGVWMSGTRGAMLAGIVGVLGYLVSSRGLVRSPWARLLLVGGIAAMLAAASYGI
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCE
VVTSVNFRDGSTIGHWYALQRNLADLHQVVLWGGGLGRQGAVAARQALTDLGGGEGAIFT
EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEE
IAYQMGLPTALLFLGFIGWSLRALWRAYRQRDNHLALAMFWLLCGMATTLISSDNAMTVS
EEEHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEE
GAGGFWLLLGGALRHCQCPLPTRRAIVRTRRDHTAPAAGMAAG
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
AAADLRGRCAMAAPSGSDPVKRAYLLLAVLLAIHLGDLLVAWLYHGGALPAAALLRPMR
CCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC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CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA