| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is rfaG [C]
Identifier: 21240821
GI number: 21240821
Start: 57197
End: 58276
Strand: Reverse
Name: rfaG [C]
Synonym: XAC0047
Alternate gene names: 21240821
Gene position: 58276-57197 (Counterclockwise)
Preceding gene: 21240822
Following gene: 77748501
Centisome position: 1.13
GC content: 66.76
Gene sequence:
>1080_bases ATGCGTATCCTGCACGTCTATAAGGATTTCGCGCCGCACAGCGGCGGCGGCGGGGTGGCGCGGCACATCCATGGGCTGGC AGTGACCCTTGCCGATGCCGGGCATACGCTGCGGATCGTGGCCCCGTTGGCCGAGGACGGCATCTCGCCACACGGCTATA CGGTGGTCCGCGCCACCGCATCGCAGCTCTGGCATCACGTCGGCTGGGCCGATGTGGTGCACGTGCACGGTGCGCGCACG CCAATCGCCGCGATCGCCGGTGCGCTTGCCCGGCTGCGCGGCAAGCGTGTGATCTATACACCGCATTGCTATTACGATGA CGATCTTGCAGCGAGCAAGCGCGCGCGCAAGTGGTGCTGGGATCGCTTGATCGAGAAGCCGCTGCTGCAAAGCGCACAAC CCACCGTGCTGCTGTCGGCGTATTGGCAGCAATACCTCTCACAGCGTCGGCTGCCGCCCAAGCGCGCCCTGCTGCTGCCC AATGCCGTGCTCGCCGCCGAGCAGTGCCTGCCCGCGACGTCACGGCAACCGTTGCTCGGGGCTCCGGCGCTGCTGTCGGT CGGCCGCCTGGACGCGGTCAAGCGGCTACAGGATGCGATCGCAGCCCTTACCCAGCCGAACATGGACGCAGCCGTGTTGC ACGTGGTCGGACGTGGCCCGGATCGGGCACGCCTGGAAGCCTGCGCCGTGGCATTGGGGGTCGCTGCACGCGTGCACTTC CATGGCTTCGTCAGCGATGCCGAGGTTGCAGCGATGGCGGCACAGGCCGATGTCTTCGTGCTGCCATCGGCCGTCGAGGG CATGCCGACCGTCTTGATCGAAATGCTGCTGCATGGGTGTCCGGTGGTTGCCAGCGACATTCCCGGCAATCGCTCGATCC TGGCCCAGATCGGCCTGCAGGCGGCCTTGCACCGGCTCGGCGACAGCGCCGCGTTGGCGGGATGCATTCGCGTGCAACGA CAGCAGCGAATTGGGCCGGAACGCATCGCGCGTGTCCGGGCAGATTTCACCTGGGAGGGCCTGCGAGCGCAGGTGCTGGC ACTGTACGATGCTCAGGTCGTAAAGGAACCCGCAACTTGA
Upstream 100 bases:
>100_bases GTTGCGTCATTGCCAATGTCCGCTGCCAACCCGACGAGCGATCGTGCGTACACGCAGGGACCACACCGCGCCCGCCGCCG GCATGGCCGCAGGTTGAGCG
Downstream 100 bases:
>100_bases CCACATCGCCGGCTCGCCTGTCCTTTCTCGGATGTCCGTTGGACCTCCTCCCCCCGGAGCAGATTCTCTTGCGTGCGCAG CACGCCGCCGAGGGCGGCGC
Product: galactosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MRILHVYKDFAPHSGGGGVARHIHGLAVTLADAGHTLRIVAPLAEDGISPHGYTVVRATASQLWHHVGWADVVHVHGART PIAAIAGALARLRGKRVIYTPHCYYDDDLAASKRARKWCWDRLIEKPLLQSAQPTVLLSAYWQQYLSQRRLPPKRALLLP NAVLAAEQCLPATSRQPLLGAPALLSVGRLDAVKRLQDAIAALTQPNMDAAVLHVVGRGPDRARLEACAVALGVAARVHF HGFVSDAEVAAMAAQADVFVLPSAVEGMPTVLIEMLLHGCPVVASDIPGNRSILAQIGLQAALHRLGDSAALAGCIRVQR QQRIGPERIARVRADFTWEGLRAQVLALYDAQVVKEPAT
Sequences:
>Translated_359_residues MRILHVYKDFAPHSGGGGVARHIHGLAVTLADAGHTLRIVAPLAEDGISPHGYTVVRATASQLWHHVGWADVVHVHGART PIAAIAGALARLRGKRVIYTPHCYYDDDLAASKRARKWCWDRLIEKPLLQSAQPTVLLSAYWQQYLSQRRLPPKRALLLP NAVLAAEQCLPATSRQPLLGAPALLSVGRLDAVKRLQDAIAALTQPNMDAAVLHVVGRGPDRARLEACAVALGVAARVHF HGFVSDAEVAAMAAQADVFVLPSAVEGMPTVLIEMLLHGCPVVASDIPGNRSILAQIGLQAALHRLGDSAALAGCIRVQR QQRIGPERIARVRADFTWEGLRAQVLALYDAQVVKEPAT >Mature_359_residues MRILHVYKDFAPHSGGGGVARHIHGLAVTLADAGHTLRIVAPLAEDGISPHGYTVVRATASQLWHHVGWADVVHVHGART PIAAIAGALARLRGKRVIYTPHCYYDDDLAASKRARKWCWDRLIEKPLLQSAQPTVLLSAYWQQYLSQRRLPPKRALLLP NAVLAAEQCLPATSRQPLLGAPALLSVGRLDAVKRLQDAIAALTQPNMDAAVLHVVGRGPDRARLEACAVALGVAARVHF HGFVSDAEVAAMAAQADVFVLPSAVEGMPTVLIEMLLHGCPVVASDIPGNRSILAQIGLQAALHRLGDSAALAGCIRVQR QQRIGPERIARVRADFTWEGLRAQVLALYDAQVVKEPAT
Specific function: Involved In The Addition Of The First Glucose Residue To The Lipopolysaccharide Core. [C]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38635; Mature: 38635
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILHVYKDFAPHSGGGGVARHIHGLAVTLADAGHTLRIVAPLAEDGISPHGYTVVRATA CEEEEEEHHCCCCCCCCHHHHHHHHHEEEEECCCCEEEEEEEHHHCCCCCCCEEEEHHHH SQLWHHVGWADVVHVHGARTPIAAIAGALARLRGKRVIYTPHCYYDDDLAASKRARKWCW HHHHHHCCHHHHEEECCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHH DRLIEKPLLQSAQPTVLLSAYWQQYLSQRRLPPKRALLLPNAVLAAEQCLPATSRQPLLG HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHEECCHHHHHHHHHCCCCCCCCCCC APALLSVGRLDAVKRLQDAIAALTQPNMDAAVLHVVGRGPDRARLEACAVALGVAARVHF CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHEEECCCCCHHHHHHHHHHHHHHHHHHH HGFVSDAEVAAMAAQADVFVLPSAVEGMPTVLIEMLLHGCPVVASDIPGNRSILAQIGLQ HHCCCCHHHHHHHHCCCEEEECHHHCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHH AALHRLGDSAALAGCIRVQRQQRIGPERIARVRADFTWEGLRAQVLALYDAQVVKEPAT HHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRILHVYKDFAPHSGGGGVARHIHGLAVTLADAGHTLRIVAPLAEDGISPHGYTVVRATA CEEEEEEHHCCCCCCCCHHHHHHHHHEEEEECCCCEEEEEEEHHHCCCCCCCEEEEHHHH SQLWHHVGWADVVHVHGARTPIAAIAGALARLRGKRVIYTPHCYYDDDLAASKRARKWCW HHHHHHCCHHHHEEECCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHH DRLIEKPLLQSAQPTVLLSAYWQQYLSQRRLPPKRALLLPNAVLAAEQCLPATSRQPLLG HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHEECCHHHHHHHHHCCCCCCCCCCC APALLSVGRLDAVKRLQDAIAALTQPNMDAAVLHVVGRGPDRARLEACAVALGVAARVHF CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHEEECCCCCHHHHHHHHHHHHHHHHHHH HGFVSDAEVAAMAAQADVFVLPSAVEGMPTVLIEMLLHGCPVVASDIPGNRSILAQIGLQ HHCCCCHHHHHHHHCCCEEEECHHHCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHH AALHRLGDSAALAGCIRVQRQQRIGPERIARVRADFTWEGLRAQVLALYDAQVVKEPAT HHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Glycosyltransferases; Hexosyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA