| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21240823
Identifier: 21240823
GI number: 21240823
Start: 59608
End: 60900
Strand: Reverse
Name: 21240823
Synonym: XAC0049
Alternate gene names: NA
Gene position: 60900-59608 (Counterclockwise)
Preceding gene: 21240824
Following gene: 21240822
Centisome position: 1.18
GC content: 70.69
Gene sequence:
>1293_bases GTGGCTACCGCCAGCTGCGCAAGGACCAGGTGCACGATGGACTTCGCTGACTTCCAGCAGGCCGTGCACGCCCAGTTCGG CGCGGAGGCGGCCGCGGTACGCCATGAGATCTACTTCCTGACCCGCCGACGCGGTGCAGGGCTGCGTGCCGCTCTGGCTG TCCTGCGTGATGCATGGCTGTGCCTGCGGCTGCCGCAACGCCCGCCCGTGCTCTCGGAGTGGACGGCGCTGGCAACCCTG CCGGGCAGCAACGGCTGGGGCGCCCTGGCGCCGTACCTGGCCGATCTGCAGCGACAGGGTGCGGCATGCACGGTGCTGAT CCATCCGCGCCTGCGCGGCAGCGTCGAGGGACAGCTGCCCGCACGACCAACCTGGGCCGGCTGGCAGGCGGCGTTGCGCG CGCTGGCCCTGCGCCGCACGCCGCTCGGGCCGGCGGTCGCCTCGCTCTGGATCGTGCGCGCCTGCGTCTTGCGCCAGCGC CTGTGGCATGGCGCATGGCAACGCACGCTGGGCGCCGCGCCCGCAGGAGCAACGCTGCTGCTGCACAACGACTTCGACAT GTATGCGGCGGCGGCACTGCACGCTGCCGGCGACGGCTGGCGGAGCGTATGCGTCCAGCATGGTCTGCCAACCGACGAGT TCTTCCCGGTCCGGGCGCGGCACCATTTGCTGTGGGGACCTAGTAGTGCGCAGGTCTACCGCAAGCACGGCGTCGCACCG GCGGCCATCGGCTATGGGCCAGCGATGGCGTTGACCGATCTCGATACCGCAACGGTGCCGACCACGCTGTATCTGATGTC GCAGAGCCACACACCGATTTATGGACCCACCCTTGCCGCGCATCTGTTGGCCTTGGCGCACGCGCTGCCGGCGCTGGAGG CAGACGGCGTGGCCGTGCGCATCCTGCTGCATCCGGAGGAAGTGCGCGGTACCCATCCGTATGCAGAGCCGGCACTGCAA CGGCGCTGCCAGGCGCCCCCGCACGCGATCCTGGAGGCGGATGCAGGTCCGGCACTGGTGGTGGGATTTTGTTCCACCGC GCTGCTGCAGGCCGCCTGCCGCGGTCACTACGTGATCGGCATGGCCTGGCCCGCCTCCGCGTCCCACGATGCGTTGGCGG TCGGGCGGCCCGCACATCAGGTCGCCGATGCCGACGCGCTGGCTGCACTGGTCCGGGCGCTGCGCAGCGATGCGGGTGCG CGAGCGCGATTCGCCGCGCAGCAACGCCATTGGCTGCAGCAGACCTTCGCGGCCGATGCGCGATGGCCGCACCATCTGGA AGCGACCCCGTGA
Upstream 100 bases:
>100_bases ATGGTCCGGTGGAGCCGGCGGGACCGGCTGCAGCGGCGGCTCAAGCACGGCCTGATCCGGGTGCTCGGCAGAGGTCTGTT CGGTGAACTGCAGCGCTGGC
Downstream 100 bases:
>100_bases AACGCGCCTATCTGCTGCTGGCGGTGCTGCTGGCGATCCACCTGGGCGATCTGCTGGTGGCCTGGCTGTACCACGGCGGG GCGCTGCCGGCGGCCGCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 430; Mature: 429
Protein sequence:
>430_residues MATASCARTRCTMDFADFQQAVHAQFGAEAAAVRHEIYFLTRRRGAGLRAALAVLRDAWLCLRLPQRPPVLSEWTALATL PGSNGWGALAPYLADLQRQGAACTVLIHPRLRGSVEGQLPARPTWAGWQAALRALALRRTPLGPAVASLWIVRACVLRQR LWHGAWQRTLGAAPAGATLLLHNDFDMYAAAALHAAGDGWRSVCVQHGLPTDEFFPVRARHHLLWGPSSAQVYRKHGVAP AAIGYGPAMALTDLDTATVPTTLYLMSQSHTPIYGPTLAAHLLALAHALPALEADGVAVRILLHPEEVRGTHPYAEPALQ RRCQAPPHAILEADAGPALVVGFCSTALLQAACRGHYVIGMAWPASASHDALAVGRPAHQVADADALAALVRALRSDAGA RARFAAQQRHWLQQTFAADARWPHHLEATP
Sequences:
>Translated_430_residues MATASCARTRCTMDFADFQQAVHAQFGAEAAAVRHEIYFLTRRRGAGLRAALAVLRDAWLCLRLPQRPPVLSEWTALATL PGSNGWGALAPYLADLQRQGAACTVLIHPRLRGSVEGQLPARPTWAGWQAALRALALRRTPLGPAVASLWIVRACVLRQR LWHGAWQRTLGAAPAGATLLLHNDFDMYAAAALHAAGDGWRSVCVQHGLPTDEFFPVRARHHLLWGPSSAQVYRKHGVAP AAIGYGPAMALTDLDTATVPTTLYLMSQSHTPIYGPTLAAHLLALAHALPALEADGVAVRILLHPEEVRGTHPYAEPALQ RRCQAPPHAILEADAGPALVVGFCSTALLQAACRGHYVIGMAWPASASHDALAVGRPAHQVADADALAALVRALRSDAGA RARFAAQQRHWLQQTFAADARWPHHLEATP >Mature_429_residues ATASCARTRCTMDFADFQQAVHAQFGAEAAAVRHEIYFLTRRRGAGLRAALAVLRDAWLCLRLPQRPPVLSEWTALATLP GSNGWGALAPYLADLQRQGAACTVLIHPRLRGSVEGQLPARPTWAGWQAALRALALRRTPLGPAVASLWIVRACVLRQRL WHGAWQRTLGAAPAGATLLLHNDFDMYAAAALHAAGDGWRSVCVQHGLPTDEFFPVRARHHLLWGPSSAQVYRKHGVAPA AIGYGPAMALTDLDTATVPTTLYLMSQSHTPIYGPTLAAHLLALAHALPALEADGVAVRILLHPEEVRGTHPYAEPALQR RCQAPPHAILEADAGPALVVGFCSTALLQAACRGHYVIGMAWPASASHDALAVGRPAHQVADADALAALVRALRSDAGAR ARFAAQQRHWLQQTFAADARWPHHLEATP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46205; Mature: 46074
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATASCARTRCTMDFADFQQAVHAQFGAEAAAVRHEIYFLTRRRGAGLRAALAVLRDAWL CCCCHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHH CLRLPQRPPVLSEWTALATLPGSNGWGALAPYLADLQRQGAACTVLIHPRLRGSVEGQLP EEECCCCCCCHHHCCEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC ARPTWAGWQAALRALALRRTPLGPAVASLWIVRACVLRQRLWHGAWQRTLGAAPAGATLL CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE LHNDFDMYAAAALHAAGDGWRSVCVQHGLPTDEFFPVRARHHLLWGPSSAQVYRKHGVAP EECCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHCCCCC AAIGYGPAMALTDLDTATVPTTLYLMSQSHTPIYGPTLAAHLLALAHALPALEADGVAVR HHHCCCCCCEEECCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEE ILLHPEEVRGTHPYAEPALQRRCQAPPHAILEADAGPALVVGFCSTALLQAACRGHYVIG EEECHHHHCCCCCCCCHHHHHHHCCCCCCEEECCCCCEEHHHHHHHHHHHHHHCCCEEEE MAWPASASHDALAVGRPAHQVADADALAALVRALRSDAGARARFAAQQRHWLQQTFAADA EECCCCCCCCCEEECCCHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC RWPHHLEATP CCCCCCCCCC >Mature Secondary Structure ATASCARTRCTMDFADFQQAVHAQFGAEAAAVRHEIYFLTRRRGAGLRAALAVLRDAWL CCCHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHH CLRLPQRPPVLSEWTALATLPGSNGWGALAPYLADLQRQGAACTVLIHPRLRGSVEGQLP EEECCCCCCCHHHCCEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC ARPTWAGWQAALRALALRRTPLGPAVASLWIVRACVLRQRLWHGAWQRTLGAAPAGATLL CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE LHNDFDMYAAAALHAAGDGWRSVCVQHGLPTDEFFPVRARHHLLWGPSSAQVYRKHGVAP EECCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHCCCCC AAIGYGPAMALTDLDTATVPTTLYLMSQSHTPIYGPTLAAHLLALAHALPALEADGVAVR HHHCCCCCCEEECCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEE ILLHPEEVRGTHPYAEPALQRRCQAPPHAILEADAGPALVVGFCSTALLQAACRGHYVIG EEECHHHHCCCCCCCCHHHHHHHCCCCCCEEECCCCCEEHHHHHHHHHHHHHHCCCEEEE MAWPASASHDALAVGRPAHQVADADALAALVRALRSDAGARARFAAQQRHWLQQTFAADA EECCCCCCCCCEEECCCHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC RWPHHLEATP CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA