Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228819

Identifier: 21228819

GI number: 21228819

Start: 3247665

End: 3249269

Strand: Reverse

Name: 21228819

Synonym: MM_2717

Alternate gene names: NA

Gene position: 3249269-3247665 (Counterclockwise)

Preceding gene: 21228821

Following gene: 21228818

Centisome position: 79.32

GC content: 40.37

Gene sequence:

>1605_bases
ATGGATAAAAAGATTGTACTGATCGGGTTACTTACCGTTTGTATTTTTTCCATTCTTTCAATGACTGCTTCTGCGGCAGA
TAACATTGAATGGGTGGAGAAAAAAGATGGAGCAAAACTTTACTGGGGAGAGACGATAAACATAGATGGTTATGATGTAA
AAGCAGAAGATTTTAATGAAGAAGGGATGGTTTTTGTCTCCATATCGAAAGATGGGGAAAAACTGAAGACTTCTCCTCTT
ACAGCAGGCCTGGAATTTGAATATAATGACGAAATAAAGGTTTATGCCCAGAAAGTGGACCCCAACTATGAAGTCATCAC
AAAGGACGGAAAAGAATTCAAGACCGGAAAGTGGAATCCATATGCTGAACTGGATATTCTTTTAAGGGGAAAACCGGGTT
TTGACATAGATGTTGAAACTAAAAAGGATACCTATGACTCAAAATTAACAGGTGACAGCAGAATAGATGTAACTATAAAT
GTTAAAAACGATGGAGAAGCAAAGGCTCAAAATGTAGTGCTGACTGTTGACACCGCCGGTCTGGAAGTGCTTAATGGAAA
AACAAAGTATACATATACGAAAATTCTTAAAGATGAAACCATTGAGCCCATAAGTCTGACGCTCAAAGCCTCCACCCCTT
GGGAGGATACTGATTATAACATAAGTGTAAAAACAACCTGTGAAGATATAAGAGGCAAGAAATACGAGCATACCGGATAC
AAAATCATAAAAATAGAGAAAAAATGGGATCTTATCGTCTCAAAGAATTTTATAAAAGAACGGCATATGGGAGAAAACGT
GCCTGTATCGGTTACAGTCAGGAACAGAGGGCTCTGTGACATAAATAATATCGTACTTAAAGATTCGATTGTTTCAAACA
TGCATCTCCAAAAAGATGCCACACTTGAGAAGACATTTTCTCTGAAGGCTGGAGAAACAGCTGAAGACGTCTTCAAGTAT
ACTCTTGTTCCGGAAAGACCCGGAGAATATACTTTCCCAAAAACTGTAGCTGCTTTTACCCTTTCAAATGGGCAGAGTGA
ACAGGTGGAATCAGATAATTCGGAAAAGATAACCATTTACGGGCCCTATATTGAAATTACGAAATCCGTTGACAGACAGC
AGCTAAATTCCGGAGACAAACTTACTGTAACGGTCACTGCAAAGAACACCGGAAATGTTGATGCCAGTGTAACAGTGACC
GATACCGTGCCCTCAGAAGCTAAACTCATTAGCGGGGAAACGAGTTTTAAGCAGGTTCTTGAAAGCAACGGTGGCTCGAA
AACCATCACGTATATTATGCAGATGAATAAAGAAGGGGAAATCAAAATACCTCCCTGCAAAGCAAATTTCCTGGACCTTG
ACAAGTACTCGGGAGAAGTATATTCGGAGTCTCCTGTAGTTAATGTGGGAAAAATAATTACCCTTGAAGGCAGCAGCCCA
CAACCTGAAGGGTCAACCAGCTCCAATGAAGAAAAAGACGAAACTTCGGATCCGAGCACTGGCGGCACGGAAGAAGATTA
TGAAGATACACCCGGGTTTGGATTCTTCCTGGCTGTAGCAGGGATTTTAATGGGAACAGGGTTCATTATGAAAAAGAAAG
CATGA

Upstream 100 bases:

>100_bases
GTTGTAATATTAAAAAGCCGCAAAATTTGCAGAAGCGCAAAATATACGTTTCAGGTGCCCGAATCCGAGAGATTCAGTAT
CAAAATCAAGGAAGGAGACC

Downstream 100 bases:

>100_bases
AAAGCAAGAATTAAATATAGTCAGGATTATTCCGACCTTCCGGATAATCCGTTTTTATGACCTTCACACTTCCCCTTGTA
CCGGGAAGGTGATTTATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 534; Mature: 534

Protein sequence:

>534_residues
MDKKIVLIGLLTVCIFSILSMTASAADNIEWVEKKDGAKLYWGETINIDGYDVKAEDFNEEGMVFVSISKDGEKLKTSPL
TAGLEFEYNDEIKVYAQKVDPNYEVITKDGKEFKTGKWNPYAELDILLRGKPGFDIDVETKKDTYDSKLTGDSRIDVTIN
VKNDGEAKAQNVVLTVDTAGLEVLNGKTKYTYTKILKDETIEPISLTLKASTPWEDTDYNISVKTTCEDIRGKKYEHTGY
KIIKIEKKWDLIVSKNFIKERHMGENVPVSVTVRNRGLCDINNIVLKDSIVSNMHLQKDATLEKTFSLKAGETAEDVFKY
TLVPERPGEYTFPKTVAAFTLSNGQSEQVESDNSEKITIYGPYIEITKSVDRQQLNSGDKLTVTVTAKNTGNVDASVTVT
DTVPSEAKLISGETSFKQVLESNGGSKTITYIMQMNKEGEIKIPPCKANFLDLDKYSGEVYSESPVVNVGKIITLEGSSP
QPEGSTSSNEEKDETSDPSTGGTEEDYEDTPGFGFFLAVAGILMGTGFIMKKKA

Sequences:

>Translated_534_residues
MDKKIVLIGLLTVCIFSILSMTASAADNIEWVEKKDGAKLYWGETINIDGYDVKAEDFNEEGMVFVSISKDGEKLKTSPL
TAGLEFEYNDEIKVYAQKVDPNYEVITKDGKEFKTGKWNPYAELDILLRGKPGFDIDVETKKDTYDSKLTGDSRIDVTIN
VKNDGEAKAQNVVLTVDTAGLEVLNGKTKYTYTKILKDETIEPISLTLKASTPWEDTDYNISVKTTCEDIRGKKYEHTGY
KIIKIEKKWDLIVSKNFIKERHMGENVPVSVTVRNRGLCDINNIVLKDSIVSNMHLQKDATLEKTFSLKAGETAEDVFKY
TLVPERPGEYTFPKTVAAFTLSNGQSEQVESDNSEKITIYGPYIEITKSVDRQQLNSGDKLTVTVTAKNTGNVDASVTVT
DTVPSEAKLISGETSFKQVLESNGGSKTITYIMQMNKEGEIKIPPCKANFLDLDKYSGEVYSESPVVNVGKIITLEGSSP
QPEGSTSSNEEKDETSDPSTGGTEEDYEDTPGFGFFLAVAGILMGTGFIMKKKA
>Mature_534_residues
MDKKIVLIGLLTVCIFSILSMTASAADNIEWVEKKDGAKLYWGETINIDGYDVKAEDFNEEGMVFVSISKDGEKLKTSPL
TAGLEFEYNDEIKVYAQKVDPNYEVITKDGKEFKTGKWNPYAELDILLRGKPGFDIDVETKKDTYDSKLTGDSRIDVTIN
VKNDGEAKAQNVVLTVDTAGLEVLNGKTKYTYTKILKDETIEPISLTLKASTPWEDTDYNISVKTTCEDIRGKKYEHTGY
KIIKIEKKWDLIVSKNFIKERHMGENVPVSVTVRNRGLCDINNIVLKDSIVSNMHLQKDATLEKTFSLKAGETAEDVFKY
TLVPERPGEYTFPKTVAAFTLSNGQSEQVESDNSEKITIYGPYIEITKSVDRQQLNSGDKLTVTVTAKNTGNVDASVTVT
DTVPSEAKLISGETSFKQVLESNGGSKTITYIMQMNKEGEIKIPPCKANFLDLDKYSGEVYSESPVVNVGKIITLEGSSP
QPEGSTSSNEEKDETSDPSTGGTEEDYEDTPGFGFFLAVAGILMGTGFIMKKKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59072; Mature: 59072

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKIVLIGLLTVCIFSILSMTASAADNIEWVEKKDGAKLYWGETINIDGYDVKAEDFNE
CCCCEEEHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCEEECCCEEEECCCCCC
EGMVFVSISKDGEKLKTSPLTAGLEFEYNDEIKVYAQKVDPNYEVITKDGKEFKTGKWNP
CCEEEEEECCCCCEEECCCCEECEEEEECCCEEEEEEECCCCEEEEECCCCCCCCCCCCC
YAELDILLRGKPGFDIDVETKKDTYDSKLTGDSRIDVTINVKNDGEAKAQNVVLTVDTAG
CEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCC
LEVLNGKTKYTYTKILKDETIEPISLTLKASTPWEDTDYNISVKTTCEDIRGKKYEHTGY
EEEECCCCCEEEEEEHHCCCCCCEEEEEEECCCCCCCCEEEEEEEEHHHHCCCEEECCCE
KIIKIEKKWDLIVSKNFIKERHMGENVPVSVTVRNRGLCDINNIVLKDSIVSNMHLQKDA
EEEEEECCEEEEEEHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEECHHHHCEEECCCC
TLEKTFSLKAGETAEDVFKYTLVPERPGEYTFPKTVAAFTLSNGQSEQVESDNSEKITIY
CHHHEEEECCCCCHHHEEEEEECCCCCCCCCCCCEEEEEEECCCCCHHCCCCCCCEEEEE
GPYIEITKSVDRQQLNSGDKLTVTVTAKNTGNVDASVTVTDTVPSEAKLISGETSFKQVL
ECEEEEECHHHHHHCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCEEECCCHHHHHHH
ESNGGSKTITYIMQMNKEGEIKIPPCKANFLDLDKYSGEVYSESPVVNVGKIITLEGSSP
HCCCCCEEEEEEEEECCCCCEEECCCCCCCEECHHCCCCEECCCCCEECCEEEEEECCCC
QPEGSTSSNEEKDETSDPSTGGTEEDYEDTPGFGFFLAVAGILMGTGFIMKKKA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECC
>Mature Secondary Structure
MDKKIVLIGLLTVCIFSILSMTASAADNIEWVEKKDGAKLYWGETINIDGYDVKAEDFNE
CCCCEEEHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCEEECCCEEEECCCCCC
EGMVFVSISKDGEKLKTSPLTAGLEFEYNDEIKVYAQKVDPNYEVITKDGKEFKTGKWNP
CCEEEEEECCCCCEEECCCCEECEEEEECCCEEEEEEECCCCEEEEECCCCCCCCCCCCC
YAELDILLRGKPGFDIDVETKKDTYDSKLTGDSRIDVTINVKNDGEAKAQNVVLTVDTAG
CEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCC
LEVLNGKTKYTYTKILKDETIEPISLTLKASTPWEDTDYNISVKTTCEDIRGKKYEHTGY
EEEECCCCCEEEEEEHHCCCCCCEEEEEEECCCCCCCCEEEEEEEEHHHHCCCEEECCCE
KIIKIEKKWDLIVSKNFIKERHMGENVPVSVTVRNRGLCDINNIVLKDSIVSNMHLQKDA
EEEEEECCEEEEEEHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEECHHHHCEEECCCC
TLEKTFSLKAGETAEDVFKYTLVPERPGEYTFPKTVAAFTLSNGQSEQVESDNSEKITIY
CHHHEEEECCCCCHHHEEEEEECCCCCCCCCCCCEEEEEEECCCCCHHCCCCCCCEEEEE
GPYIEITKSVDRQQLNSGDKLTVTVTAKNTGNVDASVTVTDTVPSEAKLISGETSFKQVL
ECEEEEECHHHHHHCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCEEECCCHHHHHHH
ESNGGSKTITYIMQMNKEGEIKIPPCKANFLDLDKYSGEVYSESPVVNVGKIITLEGSSP
HCCCCCEEEEEEEEECCCCCEEECCCCCCCEECHHCCCCEECCCCCEECCEEEEEECCCC
QPEGSTSSNEEKDETSDPSTGGTEEDYEDTPGFGFFLAVAGILMGTGFIMKKKA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA