| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228821
Identifier: 21228821
GI number: 21228821
Start: 3250793
End: 3251581
Strand: Reverse
Name: 21228821
Synonym: MM_2719
Alternate gene names: NA
Gene position: 3251581-3250793 (Counterclockwise)
Preceding gene: 21228823
Following gene: 21228819
Centisome position: 79.38
GC content: 36.38
Gene sequence:
>789_bases ATGCAAAAAGAAGACCTTGATTTTTTCCGAAAATGGTTTTTTGAATACGTAAATCAATTTTCTTCTCCTGACCTTTTCAT TAAGGAAAACATTGAGCTGAAAATTGAACATACCGGCAGGGTTTGTGAAAATATTCTTTTGCTTGCAAAATCTGAGAAAA TAAGCGAAAATGATTGCATGCTTGCCGAAACAATAGCTCTATTTCATGACCTGAGCCGTTTTGAGCAGTTCATGAAATAT AAAACGTTTAAAGATTCAGAATCCGAAAATCATGCATTTCTGAGCGTGAAAATTCTAAACAAAGAAAAAGTCCTCTCCCA CTTTTCAAAAGAAGAAAAGGGTCTCATCCTCAAATCTATAGAATGTCACAACATGATGGAAATCCCGCAGAGTATAGAAA AGCACAGTAAACTTTATTTTTTCTGCAGGTTGATAAGGGATGCCGATAAAATAGATATCCTGCGGCTTGCCAGTGAAGAA TATTCGGAAGAAAACAGGTCTCTGAATCCGGCACTAGAATTATATTTGCCGGATACGAGGGGATATTCAGAACCCATAGT ATCAGAAATTCTTAATAACAGGATGGCAAAAATTGCGGATATGAAAAACAGAAATGACGTGAAATTACTCCGCCTGAGCT GGGTTTTTGATATAAATTTCCCTGCAACTTATTCCCTTCTCAGAGAATATGGTTATCTTGAGACAATAATGTCCTCTCTG CCCGAAATAAAAGAAACGAGCCTTTTGAGAAGGCATTTTGAGAACTACCTGAGTTCTATAAATTCATGA
Upstream 100 bases:
>100_bases GAGCAAGTAGTATTGTTATTAAGACAGCAAAAAGCTTTTCAGTATAAAATTAACAAGATATACACAAAGTATATACTTCA AAATTACCTATTGCAAAAAC
Downstream 100 bases:
>100_bases AGTTAAAATTGATTGAAATTATGAAGTTGAGATGCTACTGATAAAGTATCACCGGTTAAGAACTTATTCGAGGTATCTTC TTCGATTCTCACTGCCCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: HD Domain-Containing Protein; Metal-Dependent Phosphohydrolase; Metal-Dependent Phosphohydrolase HD Sub Domain Protein; HD Domain Protein; Metal-Dependent Phosphohydrolase HD Sub Domain; Metal-Dependent Phosphoesterase; Metal-Dependent Phosphohydrolase HD Region
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MQKEDLDFFRKWFFEYVNQFSSPDLFIKENIELKIEHTGRVCENILLLAKSEKISENDCMLAETIALFHDLSRFEQFMKY KTFKDSESENHAFLSVKILNKEKVLSHFSKEEKGLILKSIECHNMMEIPQSIEKHSKLYFFCRLIRDADKIDILRLASEE YSEENRSLNPALELYLPDTRGYSEPIVSEILNNRMAKIADMKNRNDVKLLRLSWVFDINFPATYSLLREYGYLETIMSSL PEIKETSLLRRHFENYLSSINS
Sequences:
>Translated_262_residues MQKEDLDFFRKWFFEYVNQFSSPDLFIKENIELKIEHTGRVCENILLLAKSEKISENDCMLAETIALFHDLSRFEQFMKY KTFKDSESENHAFLSVKILNKEKVLSHFSKEEKGLILKSIECHNMMEIPQSIEKHSKLYFFCRLIRDADKIDILRLASEE YSEENRSLNPALELYLPDTRGYSEPIVSEILNNRMAKIADMKNRNDVKLLRLSWVFDINFPATYSLLREYGYLETIMSSL PEIKETSLLRRHFENYLSSINS >Mature_262_residues MQKEDLDFFRKWFFEYVNQFSSPDLFIKENIELKIEHTGRVCENILLLAKSEKISENDCMLAETIALFHDLSRFEQFMKY KTFKDSESENHAFLSVKILNKEKVLSHFSKEEKGLILKSIECHNMMEIPQSIEKHSKLYFFCRLIRDADKIDILRLASEE YSEENRSLNPALELYLPDTRGYSEPIVSEILNNRMAKIADMKNRNDVKLLRLSWVFDINFPATYSLLREYGYLETIMSSL PEIKETSLLRRHFENYLSSINS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31056; Mature: 31056
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKEDLDFFRKWFFEYVNQFSSPDLFIKENIELKIEHTGRVCENILLLAKSEKISENDCM CCCCHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEECHHHHHHHHHHHHCCCCCCCCCHH LAETIALFHDLSRFEQFMKYKTFKDSESENHAFLSVKILNKEKVLSHFSKEEKGLILKSI HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHCHHHCCCEEEHH ECHNMMEIPQSIEKHSKLYFFCRLIRDADKIDILRLASEEYSEENRSLNPALELYLPDTR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC GYSEPIVSEILNNRMAKIADMKNRNDVKLLRLSWVFDINFPATYSLLREYGYLETIMSSL CCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCHHHHHHHHCCHHHHHHHHC PEIKETSLLRRHFENYLSSINS CCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQKEDLDFFRKWFFEYVNQFSSPDLFIKENIELKIEHTGRVCENILLLAKSEKISENDCM CCCCHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEECHHHHHHHHHHHHCCCCCCCCCHH LAETIALFHDLSRFEQFMKYKTFKDSESENHAFLSVKILNKEKVLSHFSKEEKGLILKSI HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHCHHHCCCEEEHH ECHNMMEIPQSIEKHSKLYFFCRLIRDADKIDILRLASEEYSEENRSLNPALELYLPDTR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC GYSEPIVSEILNNRMAKIADMKNRNDVKLLRLSWVFDINFPATYSLLREYGYLETIMSSL CCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCHHHHHHHHCCHHHHHHHHC PEIKETSLLRRHFENYLSSINS CCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA