Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228634

Identifier: 21228634

GI number: 21228634

Start: 3018647

End: 3019888

Strand: Reverse

Name: 21228634

Synonym: MM_2532

Alternate gene names: NA

Gene position: 3019888-3018647 (Counterclockwise)

Preceding gene: 21228635

Following gene: 21228633

Centisome position: 73.72

GC content: 44.04

Gene sequence:

>1242_bases
GTGGATTTCCTGACAAAACTTGCCATTGCATTTTTAATAGGGATAATGGTAGGTGTGGAAAGGGAACACAGAGGGCTTGA
GCACGAGATTTTTGCAGGAGTCAGGAGTTACAGTATAACCTGCATAACGGGTATGCTCGTAGCTCTGGCAAGCGAATCCA
TAGGAACAGGCTTTGTTTACGTATCCACGCTTTTCTTTGCGGCTATGTGTTCCATAATCACCTATTCCAAAATATTCCTT
TTCAAGAGGATAGGGGTTACAAGCCCCATTACTTTATTTTTTATTTTCGTGATGGGAGTCCTTGTAGGCTATGACTACGG
CCTCTTTGCCATTGTTTCTTCAATAGTCGTAGCTTTCCTGCTTATCCAGAAACAGCCCCTCCACCAGTTTGCAGGAAACC
TTACAAAAGAAGAGCTTTACAATGCCATACAGTTTCTGGCTGTCGCTTTCATACTTTATCCGGTTATGCCGGAAAAACAG
TTCTTCGGGCTTCTAAACCTCAGATACGCGATCCTTATTGTAATTCTTGTTTCTCTGATCAGCTTTTCAAGTTATGTTCT
TTTGAGAAAATTCGGGACAAAGCGTGGCCTTTATTATTCGGGCTTTCTCGGGGGCTTTATTAACAGTGAAGCCACCACAG
GAGCGCTGGCGGGACTTTCAAAGAAGGCAGAGGAAATGGCTGCCCCGGTTATTACAGGGATCCTGCTCTGCAATATTTCC
ATGCTCATTCGGAACCTTGTTCTGGCGTTTATAGTTGACCCGACTGGCAGGACAACCATGCTTATGCTCCTTCCCCAGCT
TGTACTTATTATAGTTTCAATTGGAATGGCTTACAGGCACAGCAAGAAGGTCTGCCCGATAGGCGGGGGAGAACTCAAGA
TCCAGTCTCCTTTCTCACTGGGCCAGGCATTTAAGTTTGGCATTGCTTTTACTCTGATCCTCGTTATAGGGAACTTTGCC
TATAATGCTGCAGGGACTACAGGAATATACCTGACTGCCCTTGGTGCTCTTGTAAGCAGTTCAGGAGTGATAGTCTCCGT
AACTCTTCTTGCCGTAAGTGGGAATATTTCTTACGAAGTCGCAGCAAATACAGCAGTAATTGCAAGCCTTGTAAGTACTG
TAAATAAAATTCTGCTTTCGAAGATTTCAGGCTCTTCAAGTCTCTTTTCTCTTGCCATAAAGGATTTTGGGATCATTGCA
GCCACAGGAACTCTGGCTTTAGTTATATTGAATTTTCTGTGA

Upstream 100 bases:

>100_bases
AGTTAAATATGCTATTTTGCCGGCGTGCAGAATTATATAGAAAAAGCTGAGGGGTTGAACTACGGACGTAATCAAAGATT
TCGGTTTCGATCCAGTCTTT

Downstream 100 bases:

>100_bases
GATCGAATTCTGTAAGTCGAATTTCTATGAAATCGAATTCAGTAAGGCCGAATATTCTATAAAATCGAATTCAGTAAGGT
CGAATATTCTGTAAGATCGA

Product: hypothetical protein

Products: NA

Alternate protein names: Magnesium Transporter Accessory Protein; Transmembrane Protein; MgtC Family Protein; Mg2+ Transporter-C Family Protein; MgtC Family Membrane Protein; Mgtc/Sapb Transporter

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MDFLTKLAIAFLIGIMVGVEREHRGLEHEIFAGVRSYSITCITGMLVALASESIGTGFVYVSTLFFAAMCSIITYSKIFL
FKRIGVTSPITLFFIFVMGVLVGYDYGLFAIVSSIVVAFLLIQKQPLHQFAGNLTKEELYNAIQFLAVAFILYPVMPEKQ
FFGLLNLRYAILIVILVSLISFSSYVLLRKFGTKRGLYYSGFLGGFINSEATTGALAGLSKKAEEMAAPVITGILLCNIS
MLIRNLVLAFIVDPTGRTTMLMLLPQLVLIIVSIGMAYRHSKKVCPIGGGELKIQSPFSLGQAFKFGIAFTLILVIGNFA
YNAAGTTGIYLTALGALVSSSGVIVSVTLLAVSGNISYEVAANTAVIASLVSTVNKILLSKISGSSSLFSLAIKDFGIIA
ATGTLALVILNFL

Sequences:

>Translated_413_residues
MDFLTKLAIAFLIGIMVGVEREHRGLEHEIFAGVRSYSITCITGMLVALASESIGTGFVYVSTLFFAAMCSIITYSKIFL
FKRIGVTSPITLFFIFVMGVLVGYDYGLFAIVSSIVVAFLLIQKQPLHQFAGNLTKEELYNAIQFLAVAFILYPVMPEKQ
FFGLLNLRYAILIVILVSLISFSSYVLLRKFGTKRGLYYSGFLGGFINSEATTGALAGLSKKAEEMAAPVITGILLCNIS
MLIRNLVLAFIVDPTGRTTMLMLLPQLVLIIVSIGMAYRHSKKVCPIGGGELKIQSPFSLGQAFKFGIAFTLILVIGNFA
YNAAGTTGIYLTALGALVSSSGVIVSVTLLAVSGNISYEVAANTAVIASLVSTVNKILLSKISGSSSLFSLAIKDFGIIA
ATGTLALVILNFL
>Mature_413_residues
MDFLTKLAIAFLIGIMVGVEREHRGLEHEIFAGVRSYSITCITGMLVALASESIGTGFVYVSTLFFAAMCSIITYSKIFL
FKRIGVTSPITLFFIFVMGVLVGYDYGLFAIVSSIVVAFLLIQKQPLHQFAGNLTKEELYNAIQFLAVAFILYPVMPEKQ
FFGLLNLRYAILIVILVSLISFSSYVLLRKFGTKRGLYYSGFLGGFINSEATTGALAGLSKKAEEMAAPVITGILLCNIS
MLIRNLVLAFIVDPTGRTTMLMLLPQLVLIIVSIGMAYRHSKKVCPIGGGELKIQSPFSLGQAFKFGIAFTLILVIGNFA
YNAAGTTGIYLTALGALVSSSGVIVSVTLLAVSGNISYEVAANTAVIASLVSTVNKILLSKISGSSSLFSLAIKDFGIIA
ATGTLALVILNFL

Specific function: Unknown

COG id: COG3174

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44294; Mature: 44294

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: PS00165 DEHYDRATASE_SER_THR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFLTKLAIAFLIGIMVGVEREHRGLEHEIFAGVRSYSITCITGMLVALASESIGTGFVY
CCHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
VSTLFFAAMCSIITYSKIFLFKRIGVTSPITLFFIFVMGVLVGYDYGLFAIVSSIVVAFL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LIQKQPLHQFAGNLTKEELYNAIQFLAVAFILYPVMPEKQFFGLLNLRYAILIVILVSLI
HHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
SFSSYVLLRKFGTKRGLYYSGFLGGFINSEATTGALAGLSKKAEEMAAPVITGILLCNIS
HHHHHHHHHHHCCCCCCEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLIRNLVLAFIVDPTGRTTMLMLLPQLVLIIVSIGMAYRHSKKVCPIGGGELKIQSPFSL
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHH
GQAFKFGIAFTLILVIGNFAYNAAGTTGIYLTALGALVSSSGVIVSVTLLAVSGNISYEV
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCEEEE
AANTAVIASLVSTVNKILLSKISGSSSLFSLAIKDFGIIAATGTLALVILNFL
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MDFLTKLAIAFLIGIMVGVEREHRGLEHEIFAGVRSYSITCITGMLVALASESIGTGFVY
CCHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
VSTLFFAAMCSIITYSKIFLFKRIGVTSPITLFFIFVMGVLVGYDYGLFAIVSSIVVAFL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LIQKQPLHQFAGNLTKEELYNAIQFLAVAFILYPVMPEKQFFGLLNLRYAILIVILVSLI
HHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
SFSSYVLLRKFGTKRGLYYSGFLGGFINSEATTGALAGLSKKAEEMAAPVITGILLCNIS
HHHHHHHHHHHCCCCCCEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLIRNLVLAFIVDPTGRTTMLMLLPQLVLIIVSIGMAYRHSKKVCPIGGGELKIQSPFSL
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHH
GQAFKFGIAFTLILVIGNFAYNAAGTTGIYLTALGALVSSSGVIVSVTLLAVSGNISYEV
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCEEEE
AANTAVIASLVSTVNKILLSKISGSSSLFSLAIKDFGIIAATGTLALVILNFL
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA