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The map label for this gene is fpoB [H]

Identifier: 21228592

GI number: 21228592

Start: 2968313

End: 2968867

Strand: Reverse

Name: fpoB [H]

Synonym: MM_2490

Alternate gene names: 21228592

Gene position: 2968867-2968313 (Counterclockwise)

Preceding gene: 21228593

Following gene: 21228591

Centisome position: 72.48

GC content: 49.91

Gene sequence:

>555_bases
ATGGGTGAAGTGAAGGAGACAAAAACGAATAACTCAAAGGAAAACCCGGAAGAAGAAGTCCCCGGAGTCATCACAACAAC
TACAAGTGCAATCCACAATTTCCTCAAGAAAACAAAGGCTCAGGACATAATCAACTGGGGACGGAAAAACTCTCTCTGGT
TCATGACCCAGCCCATGGGCTGCTGCGGTGTGGAAATGATTGCAACCGGCTGCGCCCATTACGATACTGACCGTTTCGGG
ATTATTCCGAGGAACTCCCCAAGGCATGCGGATGTCATGATCATCAGCGGCTACGTGACAAAAAAGTATCTTCCGGCGTT
AAAGAGGCTCTGGGACCAGATGCCTGCGCCCAAATGGGTTATTGCCATGGGGGACTGTGCAATCAGCGGCGGACCATTTT
ACGAGTCCTACAGCACTGTTCAGAACATCGACGAAATCTTCCCTATCGATGTATATATTCCGGGATGTCCCCCCAGACCT
GAAGCCCTGATCCAGGGGTTTGTGGAACTGCAGGAAAAAATAAAAGCCAGAAAGGACCGGGGAACGGAATACTGA

Upstream 100 bases:

>100_bases
AGGGGCATGGGATTACCTCAATTGCAGTGGTTGAAATGTTTGTATTCATTTTCATACTGCTCTTCGGATATGTATATCTC
TGGAAGAAGGAGGCCCTTAC

Downstream 100 bases:

>100_bases
GGAGATTAAGGCTTATTTGAGGGAATATAATGGACGCCAGAACGATTATAGAATCATTAACCGGGAAATTCCCGGAAGCG
ATTTCTGAAGCCGGGATCGA

Product: F420H2 dehydrogenase subunit

Products: NA

Alternate protein names: NADH dehydrogenase I subunit B 2; NDH-1 subunit B 2 [H]

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MGEVKETKTNNSKENPEEEVPGVITTTTSAIHNFLKKTKAQDIINWGRKNSLWFMTQPMGCCGVEMIATGCAHYDTDRFG
IIPRNSPRHADVMIISGYVTKKYLPALKRLWDQMPAPKWVIAMGDCAISGGPFYESYSTVQNIDEIFPIDVYIPGCPPRP
EALIQGFVELQEKIKARKDRGTEY

Sequences:

>Translated_184_residues
MGEVKETKTNNSKENPEEEVPGVITTTTSAIHNFLKKTKAQDIINWGRKNSLWFMTQPMGCCGVEMIATGCAHYDTDRFG
IIPRNSPRHADVMIISGYVTKKYLPALKRLWDQMPAPKWVIAMGDCAISGGPFYESYSTVQNIDEIFPIDVYIPGCPPRP
EALIQGFVELQEKIKARKDRGTEY
>Mature_183_residues
GEVKETKTNNSKENPEEEVPGVITTTTSAIHNFLKKTKAQDIINWGRKNSLWFMTQPMGCCGVEMIATGCAHYDTDRFGI
IPRNSPRHADVMIISGYVTKKYLPALKRLWDQMPAPKWVIAMGDCAISGGPFYESYSTVQNIDEIFPIDVYIPGCPPRPE
ALIQGFVELQEKIKARKDRGTEY

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat

COG id: COG0377

COG function: function code C; NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I 20 kDa subunit family [H]

Homologues:

Organism=Homo sapiens, GI187281616, Length=138, Percent_Identity=51.4492753623188, Blast_Score=169, Evalue=1e-42,
Organism=Escherichia coli, GI1788624, Length=137, Percent_Identity=52.5547445255474, Blast_Score=154, Evalue=3e-39,
Organism=Escherichia coli, GI1789074, Length=136, Percent_Identity=39.7058823529412, Blast_Score=103, Evalue=6e-24,
Organism=Escherichia coli, GI1788834, Length=149, Percent_Identity=39.5973154362416, Blast_Score=101, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI17509685, Length=168, Percent_Identity=41.6666666666667, Blast_Score=160, Evalue=5e-40,
Organism=Drosophila melanogaster, GI18859983, Length=141, Percent_Identity=49.645390070922, Blast_Score=169, Evalue=7e-43,
Organism=Drosophila melanogaster, GI24642371, Length=141, Percent_Identity=49.645390070922, Blast_Score=169, Evalue=7e-43,
Organism=Drosophila melanogaster, GI24651058, Length=138, Percent_Identity=50, Blast_Score=166, Evalue=8e-42,

Paralogues:

None

Copy number: 520 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006137
- InterPro:   IPR006138
- InterPro:   IPR014406 [H]

Pfam domain/function: PF01058 Oxidored_q6 [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 20732; Mature: 20601

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEVKETKTNNSKENPEEEVPGVITTTTSAIHNFLKKTKAQDIINWGRKNSLWFMTQPMG
CCCCCCCCCCCCCCCCHHHCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC
CCGVEMIATGCAHYDTDRFGIIPRNSPRHADVMIISGYVTKKYLPALKRLWDQMPAPKWV
HHHHHHHHHHHHHCCCCCEECCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCEEE
IAMGDCAISGGPFYESYSTVQNIDEIFPIDVYIPGCPPRPEALIQGFVELQEKIKARKDR
EEECCEECCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHC
GTEY
CCCC
>Mature Secondary Structure 
GEVKETKTNNSKENPEEEVPGVITTTTSAIHNFLKKTKAQDIINWGRKNSLWFMTQPMG
CCCCCCCCCCCCCCCHHHCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC
CCGVEMIATGCAHYDTDRFGIIPRNSPRHADVMIISGYVTKKYLPALKRLWDQMPAPKWV
HHHHHHHHHHHHHCCCCCEECCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCEEE
IAMGDCAISGGPFYESYSTVQNIDEIFPIDVYIPGCPPRPEALIQGFVELQEKIKARKDR
EEECCEECCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHC
GTEY
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA