| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228495
Identifier: 21228495
GI number: 21228495
Start: 2855186
End: 2855641
Strand: Reverse
Name: 21228495
Synonym: MM_2393
Alternate gene names: NA
Gene position: 2855641-2855186 (Counterclockwise)
Preceding gene: 21228496
Following gene: 21228494
Centisome position: 69.71
GC content: 45.61
Gene sequence:
>456_bases ATGTTCAGTATAAACGTAAGTCCGCGCTTTGGAGATATTGACGGCCTCGGGCACGTAAATAACACAGTCCTTCCGGTCTG GTTCGAAATAGGAAGAAACCCAATTTTCAGGCTTTTCTCCCCGGACCTTGACCTCAGCCCTGATGTGTGGCATCTGATAC TTGTCAGAATTGAGTTTGATTTTCTGAGCCAGATGTATTTCAGATCCGATGTTGAAATCAGGACTTACATTACAAAAATC GGGAACAGTTCCTTTACTGTCGGTCACGAGGCATGGCAGGAGGGGGAACTCAAGGTAAGAGGTCAGGCGGTACTTGTTTA CTATGACTTCAAACTCCAGAAATCAATCCCGCTTCCGGAATCAATCCGCGAAATTTTGAAAGCACATATGTTTCCTTCAA TGGACTCCTCCTCATCTGACGCGGAAACTGGTACGGATTCTCCCTGCTCAATATAA
Upstream 100 bases:
>100_bases TGTGAGAGAACAGGCTATGACTTAATTGATGACTGAAAAAGCAAATTTAGATTAAAAACTGGATAATCAAGTAAAGACAT TAAGAGCTAGGGAATCCAAA
Downstream 100 bases:
>100_bases ACGTACTTCAGAAACCTTTGACCAGAATGGACGTTAAAAATCCGGACATGGCCCGGAGGTGTCTGAAAGTATAGTCCAGA AGGAGAGGCTGAAATTATGG
Product: hypothetical protein
Products: NA
Alternate protein names: Thioesterase Family Protein; Thioesterase; Thioesterase Superfamily; Thioesterase FcbC; 4-Hydroxybenzoyl-CoA Thioesterase
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MFSINVSPRFGDIDGLGHVNNTVLPVWFEIGRNPIFRLFSPDLDLSPDVWHLILVRIEFDFLSQMYFRSDVEIRTYITKI GNSSFTVGHEAWQEGELKVRGQAVLVYYDFKLQKSIPLPESIREILKAHMFPSMDSSSSDAETGTDSPCSI
Sequences:
>Translated_151_residues MFSINVSPRFGDIDGLGHVNNTVLPVWFEIGRNPIFRLFSPDLDLSPDVWHLILVRIEFDFLSQMYFRSDVEIRTYITKI GNSSFTVGHEAWQEGELKVRGQAVLVYYDFKLQKSIPLPESIREILKAHMFPSMDSSSSDAETGTDSPCSI >Mature_151_residues MFSINVSPRFGDIDGLGHVNNTVLPVWFEIGRNPIFRLFSPDLDLSPDVWHLILVRIEFDFLSQMYFRSDVEIRTYITKI GNSSFTVGHEAWQEGELKVRGQAVLVYYDFKLQKSIPLPESIREILKAHMFPSMDSSSSDAETGTDSPCSI
Specific function: Unknown
COG id: COG0824
COG function: function code R; Predicted thioesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17218; Mature: 17218
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSINVSPRFGDIDGLGHVNNTVLPVWFEIGRNPIFRLFSPDLDLSPDVWHLILVRIEFD CEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEEEECHH FLSQMYFRSDVEIRTYITKIGNSSFTVGHEAWQEGELKVRGQAVLVYYDFKLQKSIPLPE HHHHHHHCCCCHHEEEEHHHCCCCEEECHHHCCCCCEEECCCEEEEEEEEEEECCCCCCH SIREILKAHMFPSMDSSSSDAETGTDSPCSI HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MFSINVSPRFGDIDGLGHVNNTVLPVWFEIGRNPIFRLFSPDLDLSPDVWHLILVRIEFD CEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEEEECHH FLSQMYFRSDVEIRTYITKIGNSSFTVGHEAWQEGELKVRGQAVLVYYDFKLQKSIPLPE HHHHHHHCCCCHHEEEEHHHCCCCEEECHHHCCCCCEEECCCEEEEEEEEEEECCCCCCH SIREILKAHMFPSMDSSSSDAETGTDSPCSI HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA