Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228492

Identifier: 21228492

GI number: 21228492

Start: 2850591

End: 2851769

Strand: Reverse

Name: 21228492

Synonym: MM_2390

Alternate gene names: NA

Gene position: 2851769-2850591 (Counterclockwise)

Preceding gene: 21228493

Following gene: 21228491

Centisome position: 69.62

GC content: 38.93

Gene sequence:

>1179_bases
TTGACTCTGTATCCTTTTCCTTTCACCACAAAAAAACAGGATGCAGAGTCAATGGTAGATTTATTCTCACTCATAAAAGA
TTATCTTGTCGATCAGGAAGATGGAATTCGCCATTTAATTACGTGGTTTTTAAATCTCGTAATGGAGGAGGAAGCCCTCC
TCCAGGTTGGTGCACAACGTTATGAGAGGACTGATTCTCGTAAAGCCAGTAGAAATGGCTACAAACCCCGAACCCTCCTT
ACCAAGTATGGAGAACTTGAATTATTAAAACCTCAATTCCGTGAGTTTCCCTTTGAAACTCAGGTATTTGAGAAATATTC
CCGAGTTGAACAGGCCATCTTATCCGCTGTAGCTGAATCTTACCTGCAAGGCGTTTCCACCCGAAGGGTGGATAAGGTCA
TGACTGCTTTGGGAGTTGAGGGAATCTCAGCCTCTTCAGTTTCCAGGATTACAAAAGAGCTGGATGAGAAAGTTTCAGAA
TTTTTGTCAAAGCCAATAGAACACGAAATTCCTTATTTGTTTATTGATGCTACTTATCTCAAAGTAAGAGATGGACTTCA
TTACGAAAATAAAGCTCTCTTTATAGTTTCTGGAGTCAGGGATGATGGTTTTCGCGAGATTCTTGGAGCAAGATTGGCAG
ACAGCGAAGACTCTCTGTTCTGGCAAGATCTATTCGAAGACCTGAAAGAAAGAGGGTTAAGAGGTGTCAAGTTAATTGTT
TCTGATGGTCATAAAGGAATACAAAAAGCAGTTAGAGAATCCTTTATCGGATCAAGCTGGCAGATGTGCCACGTTCATCT
GATAAGGCAAGCTCTAAAAAAGGTTCAAAAAAAGAAGCAAAAAGAAGTAGCAGATAAGATAAAAGAAGCATTGGTAGACC
GTCATAAATACAATGATTTGATAAGGGAACTGGATAAGATGGAATATAAAAGTGCAGCTGATACTCTTGAGAATTTTCAG
TATGATGTAATGAATTACATGCAGTTTCCACAGAGTCATTGGAGAAAAATAAGGACGACAAATATGATGGAGAGAACTAA
CAAGGAGATAAAAAGAAGAACCAAAGTTGTAGGAGCATTCCCTAACCAGGAATCAGTATTGAGACTGGTAGTCTCAATAC
TCATTGATATAAATGAAGACTGGATTACTGGAAACAGGTATATAGTAATGGAGCAGTAA

Upstream 100 bases:

>100_bases
TTTTTTAATACCTGTTAATCTGAAACACAGGTTTCAATACCCTAATTAGGTGAGACATTAAAAAAAGACGGCAGTGTACC
GAAAGTTCTGTAAATTATGA

Downstream 100 bases:

>100_bases
TCAAAAAAGAAGACTAAGGGGTATAGAGCAAATTTTACAGAAAATTAGGCACACTGCCAAAAAGACTATTCTCGAATTTG
GAGTGACTTATTCACAATCT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MTLYPFPFTTKKQDAESMVDLFSLIKDYLVDQEDGIRHLITWFLNLVMEEEALLQVGAQRYERTDSRKASRNGYKPRTLL
TKYGELELLKPQFREFPFETQVFEKYSRVEQAILSAVAESYLQGVSTRRVDKVMTALGVEGISASSVSRITKELDEKVSE
FLSKPIEHEIPYLFIDATYLKVRDGLHYENKALFIVSGVRDDGFREILGARLADSEDSLFWQDLFEDLKERGLRGVKLIV
SDGHKGIQKAVRESFIGSSWQMCHVHLIRQALKKVQKKKQKEVADKIKEALVDRHKYNDLIRELDKMEYKSAADTLENFQ
YDVMNYMQFPQSHWRKIRTTNMMERTNKEIKRRTKVVGAFPNQESVLRLVVSILIDINEDWITGNRYIVMEQ

Sequences:

>Translated_392_residues
MTLYPFPFTTKKQDAESMVDLFSLIKDYLVDQEDGIRHLITWFLNLVMEEEALLQVGAQRYERTDSRKASRNGYKPRTLL
TKYGELELLKPQFREFPFETQVFEKYSRVEQAILSAVAESYLQGVSTRRVDKVMTALGVEGISASSVSRITKELDEKVSE
FLSKPIEHEIPYLFIDATYLKVRDGLHYENKALFIVSGVRDDGFREILGARLADSEDSLFWQDLFEDLKERGLRGVKLIV
SDGHKGIQKAVRESFIGSSWQMCHVHLIRQALKKVQKKKQKEVADKIKEALVDRHKYNDLIRELDKMEYKSAADTLENFQ
YDVMNYMQFPQSHWRKIRTTNMMERTNKEIKRRTKVVGAFPNQESVLRLVVSILIDINEDWITGNRYIVMEQ
>Mature_391_residues
TLYPFPFTTKKQDAESMVDLFSLIKDYLVDQEDGIRHLITWFLNLVMEEEALLQVGAQRYERTDSRKASRNGYKPRTLLT
KYGELELLKPQFREFPFETQVFEKYSRVEQAILSAVAESYLQGVSTRRVDKVMTALGVEGISASSVSRITKELDEKVSEF
LSKPIEHEIPYLFIDATYLKVRDGLHYENKALFIVSGVRDDGFREILGARLADSEDSLFWQDLFEDLKERGLRGVKLIVS
DGHKGIQKAVRESFIGSSWQMCHVHLIRQALKKVQKKKQKEVADKIKEALVDRHKYNDLIRELDKMEYKSAADTLENFQY
DVMNYMQFPQSHWRKIRTTNMMERTNKEIKRRTKVVGAFPNQESVLRLVVSILIDINEDWITGNRYIVMEQ

Specific function: Required for the transposition of the insertion element [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase mutator family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001207 [H]

Pfam domain/function: PF00872 Transposase_mut [H]

EC number: NA

Molecular weight: Translated: 45801; Mature: 45670

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLYPFPFTTKKQDAESMVDLFSLIKDYLVDQEDGIRHLITWFLNLVMEEEALLQVGAQR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YERTDSRKASRNGYKPRTLLTKYGELELLKPQFREFPFETQVFEKYSRVEQAILSAVAES
HHHHHHHHHHCCCCCCHHHHHHCCCHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
YLQGVSTRRVDKVMTALGVEGISASSVSRITKELDEKVSEFLSKPIEHEIPYLFIDATYL
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEHHHH
KVRDGLHYENKALFIVSGVRDDGFREILGARLADSEDSLFWQDLFEDLKERGLRGVKLIV
HHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEE
SDGHKGIQKAVRESFIGSSWQMCHVHLIRQALKKVQKKKQKEVADKIKEALVDRHKYNDL
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRELDKMEYKSAADTLENFQYDVMNYMQFPQSHWRKIRTTNMMERTNKEIKRRTKVVGAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PNQESVLRLVVSILIDINEDWITGNRYIVMEQ
CCHHHHHHHHHHHHHHCCCCEECCCEEEEECC
>Mature Secondary Structure 
TLYPFPFTTKKQDAESMVDLFSLIKDYLVDQEDGIRHLITWFLNLVMEEEALLQVGAQR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YERTDSRKASRNGYKPRTLLTKYGELELLKPQFREFPFETQVFEKYSRVEQAILSAVAES
HHHHHHHHHHCCCCCCHHHHHHCCCHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
YLQGVSTRRVDKVMTALGVEGISASSVSRITKELDEKVSEFLSKPIEHEIPYLFIDATYL
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEHHHH
KVRDGLHYENKALFIVSGVRDDGFREILGARLADSEDSLFWQDLFEDLKERGLRGVKLIV
HHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEE
SDGHKGIQKAVRESFIGSSWQMCHVHLIRQALKKVQKKKQKEVADKIKEALVDRHKYNDL
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRELDKMEYKSAADTLENFQYDVMNYMQFPQSHWRKIRTTNMMERTNKEIKRRTKVVGAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PNQESVLRLVVSILIDINEDWITGNRYIVMEQ
CCHHHHHHHHHHHHHHCCCCEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7768811; 11481430 [H]