| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228493
Identifier: 21228493
GI number: 21228493
Start: 2851975
End: 2852379
Strand: Reverse
Name: 21228493
Synonym: MM_2391
Alternate gene names: NA
Gene position: 2852379-2851975 (Counterclockwise)
Preceding gene: 21228494
Following gene: 21228492
Centisome position: 69.63
GC content: 43.21
Gene sequence:
>405_bases ATGGTCCCGGGTAACAGATCCAGAAAATCATTATGTTTTCAGGAAGAAGACAGAAATACGGCAGACAAAAAGGATGAATG CCATAAGTCCGGGTCTCTGGAGACTTCTCATTTCACTGAAACTCCAGAATATTTCCAGCAGGCACAAACAGGACAGGTGG TGGATGATACTCCTGAAAACCTCCTTATCTGTATGGAATACTGTGGAACCTGCCAGAGTCTGCCTTTCCCGCCTGAGCCA TTACTTTTCTGTGCACGGGGATGTTCTCAGGAAACAGTTTCGAAAAAAAGCTGCAACTGCCCTTCATGTCCTATTTACAA AAAATACAGGCTGCAAAACCTTTACTTCTGTGAAACCGGAAAAGCTGCAGAAAAGAAAGAACATAAACAGAAAGCAAAGG TCTAA
Upstream 100 bases:
>100_bases ACATTTCAAAACTTAAAAGAACATATCTTGTTTGAACATTTTTATACTCTTTAACAGAATCGGCATACCAGAATACTTAA ACTCCTTTAAAGGAGAGCTT
Downstream 100 bases:
>100_bases CAAAATAAGAATTCTGAGACTTTTCATTTAAAGAAATTATAGTTCAAATATTATTGTTTTTAGATTATTTTTTAAACTTT TATTTTTCAGATCTTTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MVPGNRSRKSLCFQEEDRNTADKKDECHKSGSLETSHFTETPEYFQQAQTGQVVDDTPENLLICMEYCGTCQSLPFPPEP LLFCARGCSQETVSKKSCNCPSCPIYKKYRLQNLYFCETGKAAEKKEHKQKAKV
Sequences:
>Translated_134_residues MVPGNRSRKSLCFQEEDRNTADKKDECHKSGSLETSHFTETPEYFQQAQTGQVVDDTPENLLICMEYCGTCQSLPFPPEP LLFCARGCSQETVSKKSCNCPSCPIYKKYRLQNLYFCETGKAAEKKEHKQKAKV >Mature_134_residues MVPGNRSRKSLCFQEEDRNTADKKDECHKSGSLETSHFTETPEYFQQAQTGQVVDDTPENLLICMEYCGTCQSLPFPPEP LLFCARGCSQETVSKKSCNCPSCPIYKKYRLQNLYFCETGKAAEKKEHKQKAKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15242; Mature: 15242
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 9.7 %Cys+Met (Translated Protein) 8.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 9.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPGNRSRKSLCFQEEDRNTADKKDECHKSGSLETSHFTETPEYFQQAQTGQVVDDTPEN CCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHH LLICMEYCGTCQSLPFPPEPLLFCARGCSQETVSKKSCNCPSCPIYKKYRLQNLYFCETG HHHHHHHHCCCCCCCCCCCHHHHHHCCCCHHHHHHCCCCCCCCCCHHHHHCCEEEEECCC KAAEKKEHKQKAKV CHHHHHHHHHHCCC >Mature Secondary Structure MVPGNRSRKSLCFQEEDRNTADKKDECHKSGSLETSHFTETPEYFQQAQTGQVVDDTPEN CCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHH LLICMEYCGTCQSLPFPPEPLLFCARGCSQETVSKKSCNCPSCPIYKKYRLQNLYFCETG HHHHHHHHCCCCCCCCCCCHHHHHHCCCCHHHHHHCCCCCCCCCCHHHHHCCEEEEECCC KAAEKKEHKQKAKV CHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA