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The map label for this gene is yedJ [H]

Identifier: 21228382

GI number: 21228382

Start: 2719363

End: 2720016

Strand: Reverse

Name: yedJ [H]

Synonym: MM_2280

Alternate gene names: 21228382

Gene position: 2720016-2719363 (Counterclockwise)

Preceding gene: 21228383

Following gene: 21228381

Centisome position: 66.4

GC content: 46.94

Gene sequence:

>654_bases
ATGAACCTTATAGAAAAAACGAGGGAATTTGCAGCTACTTTTCATGAAGGAGAGCCCAGTTCCCACGATATGTCCCACAT
AAACCGCGTAGAAGCCCTCTGCATGGAAATCCAGAAAGAAGAGGGAGGAGACCTTCTCATTTTAAGTCTCGCCGCCCTTC
TGCATGACGTTGGGGTTATCAAAGAACATGAAGAGGGGGGAGACCATGCTCTCTACAGTTCTGAGATAGCCATCGAGTTC
CTGTCGAGGGCAGGCGTTGAAATGAAAACTATTGAAGCTGTGGCATACTGTATCCAGACTCACAGATTCAGCGGGGGGAA
ACGCCCGGAAACAGTAGAAGCCAGGATCCTGCAGGATGCAGACAGGCTTGATGCCCTCGGCGCGATTGGGATTTTCAGGT
CTATCCTGTCAATGGGAGCTCTCAGGATGCTGAAGCACACAACAGGGCTTGACAAAGGGAGTTCAAAAAAGACTGTATAT
ATAGAGGATCCTGTTGAAGGTTTTAATGAATACATGCGCTACAAGCCTTTTACAATCCCCGAAAGGTTGAATACAGTCAC
GGCAAAGAGGATTGCAGGAGAAAGGCTGAAGATAATGCACATTTATCTTGAAGCTCTGAACCTTGAAGCTGGAAACGGCA
AACATAAACCTTAA

Upstream 100 bases:

>100_bases
GACCCTTTCCGAAGCGATTTCCGAAATCCAGGAACACCTCAAGACCATGGCCGCAGAAACAGGGTACTGAAAGCCAATAA
TTATCCAGAAAAGGCAACAT

Downstream 100 bases:

>100_bases
AAATAACCTTTTAAGCCCAAGAATTTAAATCCAAATTTTTGAACCCAAGCATTTGAATCAAACTTTTGAATCCAGGCATT
TAAATCCAAACTTTTGAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MNLIEKTREFAATFHEGEPSSHDMSHINRVEALCMEIQKEEGGDLLILSLAALLHDVGVIKEHEEGGDHALYSSEIAIEF
LSRAGVEMKTIEAVAYCIQTHRFSGGKRPETVEARILQDADRLDALGAIGIFRSILSMGALRMLKHTTGLDKGSSKKTVY
IEDPVEGFNEYMRYKPFTIPERLNTVTAKRIAGERLKIMHIYLEALNLEAGNGKHKP

Sequences:

>Translated_217_residues
MNLIEKTREFAATFHEGEPSSHDMSHINRVEALCMEIQKEEGGDLLILSLAALLHDVGVIKEHEEGGDHALYSSEIAIEF
LSRAGVEMKTIEAVAYCIQTHRFSGGKRPETVEARILQDADRLDALGAIGIFRSILSMGALRMLKHTTGLDKGSSKKTVY
IEDPVEGFNEYMRYKPFTIPERLNTVTAKRIAGERLKIMHIYLEALNLEAGNGKHKP
>Mature_217_residues
MNLIEKTREFAATFHEGEPSSHDMSHINRVEALCMEIQKEEGGDLLILSLAALLHDVGVIKEHEEGGDHALYSSEIAIEF
LSRAGVEMKTIEAVAYCIQTHRFSGGKRPETVEARILQDADRLDALGAIGIFRSILSMGALRMLKHTTGLDKGSSKKTVY
IEDPVEGFNEYMRYKPFTIPERLNTVTAKRIAGERLKIMHIYLEALNLEAGNGKHKP

Specific function: Unknown

COG id: COG1418

COG function: function code R; Predicted HD superfamily hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

Organism=Escherichia coli, GI1788273, Length=198, Percent_Identity=28.2828282828283, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24219; Mature: 24219

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLIEKTREFAATFHEGEPSSHDMSHINRVEALCMEIQKEEGGDLLILSLAALLHDVGVI
CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
KEHEEGGDHALYSSEIAIEFLSRAGVEMKTIEAVAYCIQTHRFSGGKRPETVEARILQDA
HCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
DRLDALGAIGIFRSILSMGALRMLKHTTGLDKGSSKKTVYIEDPVEGFNEYMRYKPFTIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCH
ERLNTVTAKRIAGERLKIMHIYLEALNLEAGNGKHKP
HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNLIEKTREFAATFHEGEPSSHDMSHINRVEALCMEIQKEEGGDLLILSLAALLHDVGVI
CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
KEHEEGGDHALYSSEIAIEFLSRAGVEMKTIEAVAYCIQTHRFSGGKRPETVEARILQDA
HCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
DRLDALGAIGIFRSILSMGALRMLKHTTGLDKGSSKKTVYIEDPVEGFNEYMRYKPFTIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCH
ERLNTVTAKRIAGERLKIMHIYLEALNLEAGNGKHKP
HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 2527357; 7567469 [H]