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The map label for this gene is arnC [H]

Identifier: 21228323

GI number: 21228323

Start: 2646754

End: 2647695

Strand: Reverse

Name: arnC [H]

Synonym: MM_2221

Alternate gene names: 21228323

Gene position: 2647695-2646754 (Counterclockwise)

Preceding gene: 21228324

Following gene: 21228322

Centisome position: 64.64

GC content: 36.62

Gene sequence:

>942_bases
ATGTCTAATAAAACCCAGTTATCAATTATAATCCCGGTACATAATGAAGAGGAAAATATCTTAGAGCTATACAAAAGTTT
ATACAATATTCTTTCACTGGTTGGAAAAACATATGAAATAATCTATGTTGATGACGGATCTACGGATGATAGCTTTGAGA
AAATAAAAAGCATTGAGGATGCAAGGGTTAAAGTTGTAAGGTTTCAGAGAAACTATGGAAAAGCTGCGGCTCTCTCCTGC
GGATTTAAAAAATCAAAAGGGGATATTGTTATTACAATGGACGGGGATTTGCAGGACGACCCCAAAGAGATACCCAGATT
TATAGAAGAACTTGATAAATATGACATGGTTTCAGGCTGGAAAAGTAAAAGATATGACCCAATTTCAAAAACCCTGCCTT
CAAGATTCTTTAACTGGTTAACCCGATTCATAACAGGGGTTAAAATCAACGATTTCAACTGCGGGTACAAAGCATATCAC
AACTATGTTGTAAAAAATATAAACTTATACGGTGAATTTCACCGCTACATCCCGGCTCTTGCTTACTGGAGAGGTTATTC
AGTTGGAGAAATTGAAGTGGAACATCACCCGAGAATACACGGGGAATCTAAATACGGAGTCGAAAGGTTATTGAAAGGTT
TCCTTGACCTTATAACAGTTACATTTCTCATGATGTACAAAAAGAGGCCTCTGCATATGTTTGGAGGCATAGGATTCCTT
CTGAGTTTTTCAGGAGTATTCATATCAGTATATTTAATGTTTTTATGGATAATAGGGGAAAGAATCGGAGACAGGCCTCT
TCTTATGCTCGGGATACTGCTTACGGTAATAGGAGCCCAGTTTGTTTCTCTAGGTCTTATAGGAGAACTGATTACAAACT
CGAGAAACAATGATGATTATATTATAAAGTACGATAGCTATGAAATGGAAAACGGCAATTAA

Upstream 100 bases:

>100_bases
GTATAGATCCAGTATATATTAGAATACACAATTTAAGGAATTAATAAACAGAAGCTCCAATTAATTCCCCCTAAGTGTAT
CCCATCTCAGAGGATTATAC

Downstream 100 bases:

>100_bases
AGTTGCAGTTACCTCTGGATTAATGCTTTACCTGATAAGCAAACTCGATGTGAATGCAATCTATGAAGCCTTTATTCAAA
TGGACCTGGCATTACTTTCT

Product: glycosyltransferase

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MSNKTQLSIIIPVHNEEENILELYKSLYNILSLVGKTYEIIYVDDGSTDDSFEKIKSIEDARVKVVRFQRNYGKAAALSC
GFKKSKGDIVITMDGDLQDDPKEIPRFIEELDKYDMVSGWKSKRYDPISKTLPSRFFNWLTRFITGVKINDFNCGYKAYH
NYVVKNINLYGEFHRYIPALAYWRGYSVGEIEVEHHPRIHGESKYGVERLLKGFLDLITVTFLMMYKKRPLHMFGGIGFL
LSFSGVFISVYLMFLWIIGERIGDRPLLMLGILLTVIGAQFVSLGLIGELITNSRNNDDYIIKYDSYEMENGN

Sequences:

>Translated_313_residues
MSNKTQLSIIIPVHNEEENILELYKSLYNILSLVGKTYEIIYVDDGSTDDSFEKIKSIEDARVKVVRFQRNYGKAAALSC
GFKKSKGDIVITMDGDLQDDPKEIPRFIEELDKYDMVSGWKSKRYDPISKTLPSRFFNWLTRFITGVKINDFNCGYKAYH
NYVVKNINLYGEFHRYIPALAYWRGYSVGEIEVEHHPRIHGESKYGVERLLKGFLDLITVTFLMMYKKRPLHMFGGIGFL
LSFSGVFISVYLMFLWIIGERIGDRPLLMLGILLTVIGAQFVSLGLIGELITNSRNNDDYIIKYDSYEMENGN
>Mature_312_residues
SNKTQLSIIIPVHNEEENILELYKSLYNILSLVGKTYEIIYVDDGSTDDSFEKIKSIEDARVKVVRFQRNYGKAAALSCG
FKKSKGDIVITMDGDLQDDPKEIPRFIEELDKYDMVSGWKSKRYDPISKTLPSRFFNWLTRFITGVKINDFNCGYKAYHN
YVVKNINLYGEFHRYIPALAYWRGYSVGEIEVEHHPRIHGESKYGVERLLKGFLDLITVTFLMMYKKRPLHMFGGIGFLL
SFSGVFISVYLMFLWIIGERIGDRPLLMLGILLTVIGAQFVSLGLIGELITNSRNNDDYIIKYDSYEMENGN

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=237, Percent_Identity=28.2700421940928, Blast_Score=86, Evalue=4e-17,
Organism=Escherichia coli, GI1788588, Length=308, Percent_Identity=33.7662337662338, Blast_Score=175, Evalue=3e-45,
Organism=Escherichia coli, GI1788692, Length=307, Percent_Identity=29.3159609120521, Blast_Score=108, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI71999402, Length=244, Percent_Identity=27.8688524590164, Blast_Score=77, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6325441, Length=123, Percent_Identity=31.7073170731707, Blast_Score=68, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24585265, Length=233, Percent_Identity=26.6094420600858, Blast_Score=77, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 36153; Mature: 36022

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNKTQLSIIIPVHNEEENILELYKSLYNILSLVGKTYEIIYVDDGSTDDSFEKIKSIED
CCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHH
ARVKVVRFQRNYGKAAALSCGFKKSKGDIVITMDGDLQDDPKEIPRFIEELDKYDMVSGW
HHHEEEEEHHCCCCHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC
KSKRYDPISKTLPSRFFNWLTRFITGVKINDFNCGYKAYHNYVVKNINLYGEFHRYIPAL
HHCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AYWRGYSVGEIEVEHHPRIHGESKYGVERLLKGFLDLITVTFLMMYKKRPLHMFGGIGFL
HHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LSFSGVFISVYLMFLWIIGERIGDRPLLMLGILLTVIGAQFVSLGLIGELITNSRNNDDY
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
IIKYDSYEMENGN
EEEECCEECCCCC
>Mature Secondary Structure 
SNKTQLSIIIPVHNEEENILELYKSLYNILSLVGKTYEIIYVDDGSTDDSFEKIKSIED
CCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHH
ARVKVVRFQRNYGKAAALSCGFKKSKGDIVITMDGDLQDDPKEIPRFIEELDKYDMVSGW
HHHEEEEEHHCCCCHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC
KSKRYDPISKTLPSRFFNWLTRFITGVKINDFNCGYKAYHNYVVKNINLYGEFHRYIPAL
HHCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AYWRGYSVGEIEVEHHPRIHGESKYGVERLLKGFLDLITVTFLMMYKKRPLHMFGGIGFL
HHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LSFSGVFISVYLMFLWIIGERIGDRPLLMLGILLTVIGAQFVSLGLIGELITNSRNNDDY
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
IIKYDSYEMENGN
EEEECCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA