Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228276

Identifier: 21228276

GI number: 21228276

Start: 2576580

End: 2577509

Strand: Reverse

Name: 21228276

Synonym: MM_2174

Alternate gene names: NA

Gene position: 2577509-2576580 (Counterclockwise)

Preceding gene: 21228280

Following gene: 21228266

Centisome position: 62.92

GC content: 47.53

Gene sequence:

>930_bases
ATGACTATCGGGGATGGTCACGATTTAAAATCATCTAGATTCGCAGGTGATGAGGTTTTAGAGGCCTGTTTTGATAAAGA
AAGGGTCCTGCGCAGAGGAGATAGCGGCCCGGCGGTAAAGAAAATTCAGGAAGCTCTTATATTTCTGGAGATCCCTGTAC
CCGGTGCCGGAGCTAATGGGATATTTGGGGACGAAACTGAACTGGCTGTCAGAAGCTACCAGGAAGCTAGAGGACTCAAG
GTTGATGGGGTAATAGGTTCAGAGACAATAGGAAGTCTGGATGAAGAATTCCCCGGTGTGGTGGAAAAGACTCCGGTTTC
ATCGGCTACGGAGCCATACGTGTCTGAAGTTCCAACTCCCCTGAAACCCACGCCTCCTGTTAAACCGCCAAGGGCGTCTC
CGGTTGAACCGGTAAAGGCACCTGACGTCCCGCCAGTAAAGGCACCTCGAGCTCCAAAGGTGGGAGTACCTCCATTAAAA
ATACCCCAGCCTCCGGGAGTGCCAACAGTTGAACCTCCGATTATGACGACACAGGCAGTTCCGCTTGAACAAACACCAGA
CCGTGTGACCAGGCCTATAACTCCGCCTGTAACCCGGCTACCTCATACGGTTGATAGTCGGGGGCGCAAATTCCATGCTG
CAGGAACATGGAAAGGCGATAAATCTTCTTTTGGAGCTGAGGCTGGAAAATCAATACGTCTTGAGGTAAAGAACCTGAAA
TCCAAAGAGTCAAACGTCATAATAAAAACAAACATGGGAGAAGTAAAAGAATCCGTGCTTTTACCTGGCAAACTTGTAGA
CTTCGAATTTGTTGAAATAGATAAAGAGCCTTTTATATGGAGATTTTACATTGAGACAGATAGTAAAGATTCTCTAATCG
AGTGGAAACTCTACAGCAACTGGGTTCCAGGAGATTCTGATAATCCCTGA

Upstream 100 bases:

>100_bases
TATTGAAATTTTAATTTTGTATTTGCGGCACATCATATAAAAAACGGAACGCGCTGCAGAGTATATGGACTAGAATTATG
AAGAATGTGGGGGATAGAAA

Downstream 100 bases:

>100_bases
AAGGTAGAAAAAACCCTTTCCTTTTTTACTTTTCCTTTTCAGAACGTTCTTTAAGCGCCCGGTTCATCTCTTCAAAACTG
TTCCTGGTAACTGCAAGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MTIGDGHDLKSSRFAGDEVLEACFDKERVLRRGDSGPAVKKIQEALIFLEIPVPGAGANGIFGDETELAVRSYQEARGLK
VDGVIGSETIGSLDEEFPGVVEKTPVSSATEPYVSEVPTPLKPTPPVKPPRASPVEPVKAPDVPPVKAPRAPKVGVPPLK
IPQPPGVPTVEPPIMTTQAVPLEQTPDRVTRPITPPVTRLPHTVDSRGRKFHAAGTWKGDKSSFGAEAGKSIRLEVKNLK
SKESNVIIKTNMGEVKESVLLPGKLVDFEFVEIDKEPFIWRFYIETDSKDSLIEWKLYSNWVPGDSDNP

Sequences:

>Translated_309_residues
MTIGDGHDLKSSRFAGDEVLEACFDKERVLRRGDSGPAVKKIQEALIFLEIPVPGAGANGIFGDETELAVRSYQEARGLK
VDGVIGSETIGSLDEEFPGVVEKTPVSSATEPYVSEVPTPLKPTPPVKPPRASPVEPVKAPDVPPVKAPRAPKVGVPPLK
IPQPPGVPTVEPPIMTTQAVPLEQTPDRVTRPITPPVTRLPHTVDSRGRKFHAAGTWKGDKSSFGAEAGKSIRLEVKNLK
SKESNVIIKTNMGEVKESVLLPGKLVDFEFVEIDKEPFIWRFYIETDSKDSLIEWKLYSNWVPGDSDNP
>Mature_308_residues
TIGDGHDLKSSRFAGDEVLEACFDKERVLRRGDSGPAVKKIQEALIFLEIPVPGAGANGIFGDETELAVRSYQEARGLKV
DGVIGSETIGSLDEEFPGVVEKTPVSSATEPYVSEVPTPLKPTPPVKPPRASPVEPVKAPDVPPVKAPRAPKVGVPPLKI
PQPPGVPTVEPPIMTTQAVPLEQTPDRVTRPITPPVTRLPHTVDSRGRKFHAAGTWKGDKSSFGAEAGKSIRLEVKNLKS
KESNVIIKTNMGEVKESVLLPGKLVDFEFVEIDKEPFIWRFYIETDSKDSLIEWKLYSNWVPGDSDNP

Specific function: Unknown

COG id: COG3409

COG function: function code M; Putative peptidoglycan-binding domain-containing protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33607; Mature: 33475

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIGDGHDLKSSRFAGDEVLEACFDKERVLRRGDSGPAVKKIQEALIFLEIPVPGAGANG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCEEEEEECCCCCCCCC
IFGDETELAVRSYQEARGLKVDGVIGSETIGSLDEEFPGVVEKTPVSSATEPYVSEVPTP
CCCCCHHHHHHHHHHHCCCEEECEECCHHHHHHHHHCCCCEECCCCCCCCCCHHHHCCCC
LKPTPPVKPPRASPVEPVKAPDVPPVKAPRAPKVGVPPLKIPQPPGVPTVEPPIMTTQAV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCC
PLEQTPDRVTRPITPPVTRLPHTVDSRGRKFHAAGTWKGDKSSFGAEAGKSIRLEVKNLK
CCCCCCHHHCCCCCCCHHHCCCCHHCCCCEEEECCCCCCCCHHCCCCCCCEEEEEEECCC
SKESNVIIKTNMGEVKESVLLPGKLVDFEFVEIDKEPFIWRFYIETDSKDSLIEWKLYSN
CCCCCEEEEECHHHHHHHHCCCCCEECEEEEEECCCCEEEEEEEECCCCCCEEEEEEECC
WVPGDSDNP
CCCCCCCCC
>Mature Secondary Structure 
TIGDGHDLKSSRFAGDEVLEACFDKERVLRRGDSGPAVKKIQEALIFLEIPVPGAGANG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCEEEEEECCCCCCCCC
IFGDETELAVRSYQEARGLKVDGVIGSETIGSLDEEFPGVVEKTPVSSATEPYVSEVPTP
CCCCCHHHHHHHHHHHCCCEEECEECCHHHHHHHHHCCCCEECCCCCCCCCCHHHHCCCC
LKPTPPVKPPRASPVEPVKAPDVPPVKAPRAPKVGVPPLKIPQPPGVPTVEPPIMTTQAV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCC
PLEQTPDRVTRPITPPVTRLPHTVDSRGRKFHAAGTWKGDKSSFGAEAGKSIRLEVKNLK
CCCCCCHHHCCCCCCCHHHCCCCHHCCCCEEEECCCCCCCCHHCCCCCCCEEEEEEECCC
SKESNVIIKTNMGEVKESVLLPGKLVDFEFVEIDKEPFIWRFYIETDSKDSLIEWKLYSN
CCCCCEEEEECHHHHHHHHCCCCCEECEEEEEECCCCEEEEEEEECCCCCCEEEEEEECC
WVPGDSDNP
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA