Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228063

Identifier: 21228063

GI number: 21228063

Start: 2328909

End: 2331071

Strand: Reverse

Name: 21228063

Synonym: MM_1961

Alternate gene names: NA

Gene position: 2331071-2328909 (Counterclockwise)

Preceding gene: 21228064

Following gene: 21228060

Centisome position: 56.91

GC content: 43.64

Gene sequence:

>2163_bases
GTGTCCGTTGCAATTGCTGCAGATGAGGATATACCTTTTGAGGATGACGGAAATTCAACGGTCTTACTGCCTGACCTGGT
AATTGAGGATATTTCCCTGAGCACAAACTCTCCTGGTGCCGGGGAACAGATAACTGTTACAGCTACCGTCACAAATCAGG
GGAATACAGCATCGGGATCAACAAACCTGAGATATTATAGCAACGGAAATAGGATCGGAGAAAGCCCAGTTCCTGAAATG
GAAGCCGGAAAAAGTGAAGAAATATCGTTCTCATGGACCCCTGAAACCGAAAGTACAGCTGAGATAAGTGCGAAAGTAGA
CGAAGAAAATCTGGTGGAAGAAGGAAATGAGGATAATAACGTCAAAACTGCAGGCTTCATCACTTTCAAAAAGGAAAACC
TCCCGGACCTGATAATAAATTCGATTAACCACCCTCAATATCCCTCTCCAGGAAAGCCCAAGACCATAGGAATAAGTGTG
ATAAACAATGGGGCTGCCAGTTCGGGAGAGACAAAACTTATGCTCTACATTGACGGAAGACCTGCTAGAGAATGGGACAT
ACCCGGACTGTCAGGGGGGGAGAGTGCTTATAAATCGTATACCTGGATTCCGATATTAGAAGGATCTGCAGAAATAAAAG
CCGTGGTTGACGAAAATAACCAGGTAACCGAGAGCGATGAGGAAAATAATGAAAAAACAGCCACCATAACAGTAGCAATA
GATTTTCTTCCGGATCTGATAATTGAAGATATTGTTCCTGAGACTGAGGGAGAACTTGGAAAGCCGCTTAACCTGATTCT
TAAAGTAAAAAACCAGGGAACTTTTGCCTCTGAAGAAGCTGTAGCAGAATACTACATTAACGGAACTGCCCCAGATCAGG
AGGGTATAAATATTCCAGCCTTACCGGCAGGGACAGGGGCAGATGTCTCCTTCTCTCTGATTCCGGACAGAGAAGGGCAG
ATGGAAGTAAAAGCGTTTATCGATTCCGGGACATATGTTTACGAAAGTAATGAAGACAATAACCAGTTTTCAAAAATCGT
GAACGTAAAAACAAAACTCCCTGACCTGATAATCGAATCAGTCTCGTTAACCCCGGAAGCTCCCAGAATAGGAGATAGCG
TTACTTTCACGGTATCGGTAAAGAACATAGGGCTCAGCGATTCTGGAAGCAGCGAACTGAGATATCAGATAAACGGAGCC
AATAAAACCTACAGCAGCACATTATCAGTACCTCCGGTTGTCACAGGAGAAACCGTAAAAAGCACCTTTTCCTGGGTACC
TGAAGAAGATGGGAATTTGAATATGGAACTTGTAGCTGACTCCGGAAGTGCTATACGTGAAGATGACGAGACAAACAATA
AATTAACCAGGACTATCGCTGTCTCCAAACAGGCTACCTACACAAATGGAGGGAGCTCAGGTTCCGGTTCAGGAAGTGGC
AGCAGTAGCAAAAGCAACAGCATGGGCAGCGGTGTTTCTAAAGAGCCTGCAAGAAATGTAGAAGTTAAAGAGCTGGATAC
AAGAAACATCATGAGCGGTTACCATGTAAAATATGATTTTGCGAAAAATGCAACCTGTGTCACATATGTTGAATTTGAAC
CCAGGAAGACGTTTAAGAAAACAACAGCAACTGTAGAAGTCCTCAAAGAGAAATCCATTTTTGTCCAGAAGCAGCCGCCT
GGAAGAATATATAAGCAGCTTAACATCTGGTTGGGAAATAAAGGGGCAGGTCGTGAGGACTCTCTCAAAAATGCCTATAC
AGGGTTCAAAGTGGAAAAGGATTGGATAAAAAATAACAGTGTTGAAGAATCCAATATAGCCCTCCTATGGTACGACAGTA
AATGGAAGCCTCTGAAAACTGAAAAAACAGGTGAAGATGATGACTACGTTTATTTCAGGGCAGAAACCATTGCTTACTCC
TGTTTTGCAATAGGCGAATATAAAGGAGAAGAGGGAACTGTGAAGGAGACCACCGACGACGAAGGAATACAGGAAACCCT
GAGAAGCTGGGAAGGCGGCGGGAAGGCGATCCTGAACAGCAGTGCAGAAAGAGAAGACGATATTCAGAAGAAGCCGATGG
GTGTAGCAAAGATACTTCTTGCGATCTCTCTGCCTCTGTTTATGATTCTTGTGGAATATTTCGTTCTGAAGAAAAAGATC
TAA

Upstream 100 bases:

>100_bases
ATTAATAGACGTGTGGGGGCGGAGGCTAATAAAAATGAAAATAAATTTTTTTCATTCTTTGGTCTATGTATTGATAATAA
CGATTATAATTCCTGGAATT

Downstream 100 bases:

>100_bases
AAAGGCTTAAAAGAACGAAAAAAGATTTTTTTCTTCACCTTTATTTTTCATTTTTACACCGAAGCCTGAGTATTTAAATG
AAGGTGTTTAAATTCTGACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 720; Mature: 719

Protein sequence:

>720_residues
MSVAIAADEDIPFEDDGNSTVLLPDLVIEDISLSTNSPGAGEQITVTATVTNQGNTASGSTNLRYYSNGNRIGESPVPEM
EAGKSEEISFSWTPETESTAEISAKVDEENLVEEGNEDNNVKTAGFITFKKENLPDLIINSINHPQYPSPGKPKTIGISV
INNGAASSGETKLMLYIDGRPAREWDIPGLSGGESAYKSYTWIPILEGSAEIKAVVDENNQVTESDEENNEKTATITVAI
DFLPDLIIEDIVPETEGELGKPLNLILKVKNQGTFASEEAVAEYYINGTAPDQEGINIPALPAGTGADVSFSLIPDREGQ
MEVKAFIDSGTYVYESNEDNNQFSKIVNVKTKLPDLIIESVSLTPEAPRIGDSVTFTVSVKNIGLSDSGSSELRYQINGA
NKTYSSTLSVPPVVTGETVKSTFSWVPEEDGNLNMELVADSGSAIREDDETNNKLTRTIAVSKQATYTNGGSSGSGSGSG
SSSKSNSMGSGVSKEPARNVEVKELDTRNIMSGYHVKYDFAKNATCVTYVEFEPRKTFKKTTATVEVLKEKSIFVQKQPP
GRIYKQLNIWLGNKGAGREDSLKNAYTGFKVEKDWIKNNSVEESNIALLWYDSKWKPLKTEKTGEDDDYVYFRAETIAYS
CFAIGEYKGEEGTVKETTDDEGIQETLRSWEGGGKAILNSSAEREDDIQKKPMGVAKILLAISLPLFMILVEYFVLKKKI

Sequences:

>Translated_720_residues
MSVAIAADEDIPFEDDGNSTVLLPDLVIEDISLSTNSPGAGEQITVTATVTNQGNTASGSTNLRYYSNGNRIGESPVPEM
EAGKSEEISFSWTPETESTAEISAKVDEENLVEEGNEDNNVKTAGFITFKKENLPDLIINSINHPQYPSPGKPKTIGISV
INNGAASSGETKLMLYIDGRPAREWDIPGLSGGESAYKSYTWIPILEGSAEIKAVVDENNQVTESDEENNEKTATITVAI
DFLPDLIIEDIVPETEGELGKPLNLILKVKNQGTFASEEAVAEYYINGTAPDQEGINIPALPAGTGADVSFSLIPDREGQ
MEVKAFIDSGTYVYESNEDNNQFSKIVNVKTKLPDLIIESVSLTPEAPRIGDSVTFTVSVKNIGLSDSGSSELRYQINGA
NKTYSSTLSVPPVVTGETVKSTFSWVPEEDGNLNMELVADSGSAIREDDETNNKLTRTIAVSKQATYTNGGSSGSGSGSG
SSSKSNSMGSGVSKEPARNVEVKELDTRNIMSGYHVKYDFAKNATCVTYVEFEPRKTFKKTTATVEVLKEKSIFVQKQPP
GRIYKQLNIWLGNKGAGREDSLKNAYTGFKVEKDWIKNNSVEESNIALLWYDSKWKPLKTEKTGEDDDYVYFRAETIAYS
CFAIGEYKGEEGTVKETTDDEGIQETLRSWEGGGKAILNSSAEREDDIQKKPMGVAKILLAISLPLFMILVEYFVLKKKI
>Mature_719_residues
SVAIAADEDIPFEDDGNSTVLLPDLVIEDISLSTNSPGAGEQITVTATVTNQGNTASGSTNLRYYSNGNRIGESPVPEME
AGKSEEISFSWTPETESTAEISAKVDEENLVEEGNEDNNVKTAGFITFKKENLPDLIINSINHPQYPSPGKPKTIGISVI
NNGAASSGETKLMLYIDGRPAREWDIPGLSGGESAYKSYTWIPILEGSAEIKAVVDENNQVTESDEENNEKTATITVAID
FLPDLIIEDIVPETEGELGKPLNLILKVKNQGTFASEEAVAEYYINGTAPDQEGINIPALPAGTGADVSFSLIPDREGQM
EVKAFIDSGTYVYESNEDNNQFSKIVNVKTKLPDLIIESVSLTPEAPRIGDSVTFTVSVKNIGLSDSGSSELRYQINGAN
KTYSSTLSVPPVVTGETVKSTFSWVPEEDGNLNMELVADSGSAIREDDETNNKLTRTIAVSKQATYTNGGSSGSGSGSGS
SSKSNSMGSGVSKEPARNVEVKELDTRNIMSGYHVKYDFAKNATCVTYVEFEPRKTFKKTTATVEVLKEKSIFVQKQPPG
RIYKQLNIWLGNKGAGREDSLKNAYTGFKVEKDWIKNNSVEESNIALLWYDSKWKPLKTEKTGEDDDYVYFRAETIAYSC
FAIGEYKGEEGTVKETTDDEGIQETLRSWEGGGKAILNSSAEREDDIQKKPMGVAKILLAISLPLFMILVEYFVLKKKI

Specific function: Unknown

COG id: COG1572

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 78387; Mature: 78255

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVAIAADEDIPFEDDGNSTVLLPDLVIEDISLSTNSPGAGEQITVTATVTNQGNTASGS
CEEEEECCCCCCCCCCCCCEEEEHHHEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCC
TNLRYYSNGNRIGESPVPEMEAGKSEEISFSWTPETESTAEISAKVDEENLVEEGNEDNN
CEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCHHHHHHCCCCCCC
VKTAGFITFKKENLPDLIINSINHPQYPSPGKPKTIGISVINNGAASSGETKLMLYIDGR
EEEEEEEEEECCCCCHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEECCC
PAREWDIPGLSGGESAYKSYTWIPILEGSAEIKAVVDENNQVTESDEENNEKTATITVAI
CCCCCCCCCCCCCCHHHHCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEE
DFLPDLIIEDIVPETEGELGKPLNLILKVKNQGTFASEEAVAEYYINGTAPDQEGINIPA
HHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCHHCEEEEEECCCCCCCCCCCCCC
LPAGTGADVSFSLIPDREGQMEVKAFIDSGTYVYESNEDNNQFSKIVNVKTKLPDLIIES
CCCCCCCCEEEEECCCCCCCEEEEEEECCCEEEEECCCCCCHHHHHEEHHHHCCHHHHHH
VSLTPEAPRIGDSVTFTVSVKNIGLSDSGSSELRYQINGANKTYSSTLSVPPVVTGETVK
CCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCEECCHHHH
STFSWVPEEDGNLNMELVADSGSAIREDDETNNKLTRTIAVSKQATYTNGGSSGSGSGSG
HHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCEEECCCCCCCCCCCCC
SSSKSNSMGSGVSKEPARNVEVKELDTRNIMSGYHVKYDFAKNATCVTYVEFEPRKTFKK
CCCCCCCCCCCCCCCCCCCCEEEECCCHHHCCCCEEEEEECCCCEEEEEEEECCHHHHHH
TTATVEVLKEKSIFVQKQPPGRIYKQLNIWLGNKGAGREDSLKNAYTGFKVEKDWIKNNS
HHHHHHHHHCCCEEEEECCCHHEEEEEEEEECCCCCCCCCHHHHHHCCCEEEHHHHCCCC
VEESNIALLWYDSKWKPLKTEKTGEDDDYVYFRAETIAYSCFAIGEYKGEEGTVKETTDD
CCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEHHEEEEEEEEEEEECCCCCCCCCCCC
EGIQETLRSWEGGGKAILNSSAEREDDIQKKPMGVAKILLAISLPLFMILVEYFVLKKKI
HHHHHHHHHCCCCCCEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SVAIAADEDIPFEDDGNSTVLLPDLVIEDISLSTNSPGAGEQITVTATVTNQGNTASGS
EEEEECCCCCCCCCCCCCEEEEHHHEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCC
TNLRYYSNGNRIGESPVPEMEAGKSEEISFSWTPETESTAEISAKVDEENLVEEGNEDNN
CEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCHHHHHHCCCCCCC
VKTAGFITFKKENLPDLIINSINHPQYPSPGKPKTIGISVINNGAASSGETKLMLYIDGR
EEEEEEEEEECCCCCHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEECCC
PAREWDIPGLSGGESAYKSYTWIPILEGSAEIKAVVDENNQVTESDEENNEKTATITVAI
CCCCCCCCCCCCCCHHHHCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEE
DFLPDLIIEDIVPETEGELGKPLNLILKVKNQGTFASEEAVAEYYINGTAPDQEGINIPA
HHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCHHCEEEEEECCCCCCCCCCCCCC
LPAGTGADVSFSLIPDREGQMEVKAFIDSGTYVYESNEDNNQFSKIVNVKTKLPDLIIES
CCCCCCCCEEEEECCCCCCCEEEEEEECCCEEEEECCCCCCHHHHHEEHHHHCCHHHHHH
VSLTPEAPRIGDSVTFTVSVKNIGLSDSGSSELRYQINGANKTYSSTLSVPPVVTGETVK
CCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCEECCHHHH
STFSWVPEEDGNLNMELVADSGSAIREDDETNNKLTRTIAVSKQATYTNGGSSGSGSGSG
HHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCEEECCCCCCCCCCCCC
SSSKSNSMGSGVSKEPARNVEVKELDTRNIMSGYHVKYDFAKNATCVTYVEFEPRKTFKK
CCCCCCCCCCCCCCCCCCCCEEEECCCHHHCCCCEEEEEECCCCEEEEEEEECCHHHHHH
TTATVEVLKEKSIFVQKQPPGRIYKQLNIWLGNKGAGREDSLKNAYTGFKVEKDWIKNNS
HHHHHHHHHCCCEEEEECCCHHEEEEEEEEECCCCCCCCCHHHHHHCCCEEEHHHHCCCC
VEESNIALLWYDSKWKPLKTEKTGEDDDYVYFRAETIAYSCFAIGEYKGEEGTVKETTDD
CCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEHHEEEEEEEEEEEECCCCCCCCCCCC
EGIQETLRSWEGGGKAILNSSAEREDDIQKKPMGVAKILLAISLPLFMILVEYFVLKKKI
HHHHHHHHHCCCCCCEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA