Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227993

Identifier: 21227993

GI number: 21227993

Start: 2245852

End: 2247165

Strand: Reverse

Name: 21227993

Synonym: MM_1891

Alternate gene names: NA

Gene position: 2247165-2245852 (Counterclockwise)

Preceding gene: 21227994

Following gene: 21227992

Centisome position: 54.86

GC content: 45.89

Gene sequence:

>1314_bases
GTGAGACCAATGGCAAGCGAACTTACAACGTTTGTCCTGATATTCGGAACACTATTGTTTGTTTTCGGTCTGTTTTCCAG
GAAGATTGAAGGGACAGTTGTTACTATCCAGATGATATTTCTGGCAGCTGGAATACTTCTCAGTCCAATAGGACTTAATT
TGATATCTCTCTCCCCGAGAAGTGGACTCGTTCTGGGAGTAATCAAAGTTGCACTGGTACTCACCTTTTTTTCCGATGCA
TCGCTTATAGGGCTACACTCGCTGTTTCTGAAAGAGCGACTTTCTGTAAGGTTGCTCTTTCTTGGGCTTTCACTTACGAT
CTGCCTTGGAACAGTGTTTGCAGCTCTTCTTTTTGCAGATATTACCTTTATAGACGCAATACTGCTCGGGATAATACTTG
CACCTACGGATGCCTCACTTGCCCAGAAGGTAGTTGAAGAACGCCAGGTTCCGACCCTTATCCGAAATGGCCTGATCATA
GAGAGCGGACTTAATGATGGGGCTGTCATGCCATTATTCATTTTTGTCGTTGCTCTTGAAGCAGTTGAAAAACTGAACAG
ACCCCTGGGAACATTTCTTGCTATTGCCCTTGAACAGATAGGATTTGGGATATTTGTCGGCATAATCATCGGCCTTGTGG
GAGGATGGTTATTCAGCAGAGCCTTTAAGGCTGGGTCGATGTCAGAGGTCTACTATAGAACTGAGTTTGTAGCATTGGCC
CTGATCTCCTGGCTTGTAGCAGATGGGGTAGGAGGAAATGGATTCATTGCAGCCTTCATTGCAGGACTTGCCACCAGGAT
AGAGGACAGGCAAGTAACTGAGGAGGAAGTGATCCTTCTTCCTAGAGCCGAAGGGAACGTACTGAACCTTGCAGTCTTAT
TTATCCTGGGTGTCATGTCGGCAGAGTATCTTCCCCTCGTTGACCTGAAGATATTTGCATATGCAGTTCTCAGCCTTACA
GTAGTCCGAATGGTCCCTGTGACTATCTCGCTTATTGGAAGTCATTTAAACATTAAGACCGGCCTTTTCATGGGCTGGTT
TGGTCCCAGGGGTCTTGCCTCCATTGTCCTTATGCTTATAACAGTCGAAAGGATTGAAGGAATAAGAGTATCAGGAACTA
TAGGTTTGGCTGTGATAACAACAGTGATTATCAGTGTCTTTGCCCACGGGATCACTGCTGGCCCGGTAAGCAACTGGTAC
GCCCGGATAATAGCAACGCTCCCTCCTGATGCTCCGGAAAAGGAAAGTGTGGAGGAACTAACGGCACTTCAGGGAATTGA
AACTACTGAGAATATCCATAAAGAGCCTTATTGA

Upstream 100 bases:

>100_bases
ATGCATGGAATTGCATGATATAAAGGGCAAATATAAGGGGGTTGTGTACCAGCCTTCCGGTAATTCTACGTAACATCTGG
TAGATTTCCACAGGAAACAG

Downstream 100 bases:

>100_bases
AGAAGTCAGAAGGATATTTAAAAAGAAGAGAGGAAACATCTGGTGATAACCACAGATACCCTGATAACAATTGGCAACAT
CCTCATAAGGATTGTCGCAA

Product: Na(+)/H(+) antiporter

Products: NA

Alternate protein names: Na(+)/H(+) Antiporter; Na+/H+ Antiporter; Transporter CPA2 Family; NhaP-Type Na+/H+ And K+/H+ Antiporter Protein; CPA1 Family Na(+)/H(+) Antiporter; NhaP-Type Na+/H+ And K+/H+ Antiporter; Sodium/Hydrogen Exchanger Family Protein; Na+/H+ Antiporter CPA1 Family Protein; NhaP Family Na(+)/H(+) Antiporter

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MRPMASELTTFVLIFGTLLFVFGLFSRKIEGTVVTIQMIFLAAGILLSPIGLNLISLSPRSGLVLGVIKVALVLTFFSDA
SLIGLHSLFLKERLSVRLLFLGLSLTICLGTVFAALLFADITFIDAILLGIILAPTDASLAQKVVEERQVPTLIRNGLII
ESGLNDGAVMPLFIFVVALEAVEKLNRPLGTFLAIALEQIGFGIFVGIIIGLVGGWLFSRAFKAGSMSEVYYRTEFVALA
LISWLVADGVGGNGFIAAFIAGLATRIEDRQVTEEEVILLPRAEGNVLNLAVLFILGVMSAEYLPLVDLKIFAYAVLSLT
VVRMVPVTISLIGSHLNIKTGLFMGWFGPRGLASIVLMLITVERIEGIRVSGTIGLAVITTVIISVFAHGITAGPVSNWY
ARIIATLPPDAPEKESVEELTALQGIETTENIHKEPY

Sequences:

>Translated_437_residues
MRPMASELTTFVLIFGTLLFVFGLFSRKIEGTVVTIQMIFLAAGILLSPIGLNLISLSPRSGLVLGVIKVALVLTFFSDA
SLIGLHSLFLKERLSVRLLFLGLSLTICLGTVFAALLFADITFIDAILLGIILAPTDASLAQKVVEERQVPTLIRNGLII
ESGLNDGAVMPLFIFVVALEAVEKLNRPLGTFLAIALEQIGFGIFVGIIIGLVGGWLFSRAFKAGSMSEVYYRTEFVALA
LISWLVADGVGGNGFIAAFIAGLATRIEDRQVTEEEVILLPRAEGNVLNLAVLFILGVMSAEYLPLVDLKIFAYAVLSLT
VVRMVPVTISLIGSHLNIKTGLFMGWFGPRGLASIVLMLITVERIEGIRVSGTIGLAVITTVIISVFAHGITAGPVSNWY
ARIIATLPPDAPEKESVEELTALQGIETTENIHKEPY
>Mature_437_residues
MRPMASELTTFVLIFGTLLFVFGLFSRKIEGTVVTIQMIFLAAGILLSPIGLNLISLSPRSGLVLGVIKVALVLTFFSDA
SLIGLHSLFLKERLSVRLLFLGLSLTICLGTVFAALLFADITFIDAILLGIILAPTDASLAQKVVEERQVPTLIRNGLII
ESGLNDGAVMPLFIFVVALEAVEKLNRPLGTFLAIALEQIGFGIFVGIIIGLVGGWLFSRAFKAGSMSEVYYRTEFVALA
LISWLVADGVGGNGFIAAFIAGLATRIEDRQVTEEEVILLPRAEGNVLNLAVLFILGVMSAEYLPLVDLKIFAYAVLSLT
VVRMVPVTISLIGSHLNIKTGLFMGWFGPRGLASIVLMLITVERIEGIRVSGTIGLAVITTVIISVFAHGITAGPVSNWY
ARIIATLPPDAPEKESVEELTALQGIETTENIHKEPY

Specific function: Unknown

COG id: COG0025

COG function: function code P; NhaP-type Na+/H+ and K+/H+ antiporters

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46984; Mature: 46984

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPMASELTTFVLIFGTLLFVFGLFSRKIEGTVVTIQMIFLAAGILLSPIGLNLISLSPR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCC
SGLVLGVIKVALVLTFFSDASLIGLHSLFLKERLSVRLLFLGLSLTICLGTVFAALLFAD
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITFIDAILLGIILAPTDASLAQKVVEERQVPTLIRNGLIIESGLNDGAVMPLFIFVVALE
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHCCEEEECCCCCCCHHHHHHHHHHHH
AVEKLNRPLGTFLAIALEQIGFGIFVGIIIGLVGGWLFSRAFKAGSMSEVYYRTEFVALA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LISWLVADGVGGNGFIAAFIAGLATRIEDRQVTEEEVILLPRAEGNVLNLAVLFILGVMS
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHC
AEYLPLVDLKIFAYAVLSLTVVRMVPVTISLIGSHLNIKTGLFMGWFGPRGLASIVLMLI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEECCCCHHHHHHHHHHH
TVERIEGIRVSGTIGLAVITTVIISVFAHGITAGPVSNWYARIIATLPPDAPEKESVEEL
HHHHHCCEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHH
TALQGIETTENIHKEPY
HHHHCCCHHHHHCCCCC
>Mature Secondary Structure
MRPMASELTTFVLIFGTLLFVFGLFSRKIEGTVVTIQMIFLAAGILLSPIGLNLISLSPR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCC
SGLVLGVIKVALVLTFFSDASLIGLHSLFLKERLSVRLLFLGLSLTICLGTVFAALLFAD
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITFIDAILLGIILAPTDASLAQKVVEERQVPTLIRNGLIIESGLNDGAVMPLFIFVVALE
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHCCEEEECCCCCCCHHHHHHHHHHHH
AVEKLNRPLGTFLAIALEQIGFGIFVGIIIGLVGGWLFSRAFKAGSMSEVYYRTEFVALA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LISWLVADGVGGNGFIAAFIAGLATRIEDRQVTEEEVILLPRAEGNVLNLAVLFILGVMS
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHC
AEYLPLVDLKIFAYAVLSLTVVRMVPVTISLIGSHLNIKTGLFMGWFGPRGLASIVLMLI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEECCCCHHHHHHHHHHH
TVERIEGIRVSGTIGLAVITTVIISVFAHGITAGPVSNWYARIIATLPPDAPEKESVEEL
HHHHHCCEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHH
TALQGIETTENIHKEPY
HHHHCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA