| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227993
Identifier: 21227993
GI number: 21227993
Start: 2245852
End: 2247165
Strand: Reverse
Name: 21227993
Synonym: MM_1891
Alternate gene names: NA
Gene position: 2247165-2245852 (Counterclockwise)
Preceding gene: 21227994
Following gene: 21227992
Centisome position: 54.86
GC content: 45.89
Gene sequence:
>1314_bases GTGAGACCAATGGCAAGCGAACTTACAACGTTTGTCCTGATATTCGGAACACTATTGTTTGTTTTCGGTCTGTTTTCCAG GAAGATTGAAGGGACAGTTGTTACTATCCAGATGATATTTCTGGCAGCTGGAATACTTCTCAGTCCAATAGGACTTAATT TGATATCTCTCTCCCCGAGAAGTGGACTCGTTCTGGGAGTAATCAAAGTTGCACTGGTACTCACCTTTTTTTCCGATGCA TCGCTTATAGGGCTACACTCGCTGTTTCTGAAAGAGCGACTTTCTGTAAGGTTGCTCTTTCTTGGGCTTTCACTTACGAT CTGCCTTGGAACAGTGTTTGCAGCTCTTCTTTTTGCAGATATTACCTTTATAGACGCAATACTGCTCGGGATAATACTTG CACCTACGGATGCCTCACTTGCCCAGAAGGTAGTTGAAGAACGCCAGGTTCCGACCCTTATCCGAAATGGCCTGATCATA GAGAGCGGACTTAATGATGGGGCTGTCATGCCATTATTCATTTTTGTCGTTGCTCTTGAAGCAGTTGAAAAACTGAACAG ACCCCTGGGAACATTTCTTGCTATTGCCCTTGAACAGATAGGATTTGGGATATTTGTCGGCATAATCATCGGCCTTGTGG GAGGATGGTTATTCAGCAGAGCCTTTAAGGCTGGGTCGATGTCAGAGGTCTACTATAGAACTGAGTTTGTAGCATTGGCC CTGATCTCCTGGCTTGTAGCAGATGGGGTAGGAGGAAATGGATTCATTGCAGCCTTCATTGCAGGACTTGCCACCAGGAT AGAGGACAGGCAAGTAACTGAGGAGGAAGTGATCCTTCTTCCTAGAGCCGAAGGGAACGTACTGAACCTTGCAGTCTTAT TTATCCTGGGTGTCATGTCGGCAGAGTATCTTCCCCTCGTTGACCTGAAGATATTTGCATATGCAGTTCTCAGCCTTACA GTAGTCCGAATGGTCCCTGTGACTATCTCGCTTATTGGAAGTCATTTAAACATTAAGACCGGCCTTTTCATGGGCTGGTT TGGTCCCAGGGGTCTTGCCTCCATTGTCCTTATGCTTATAACAGTCGAAAGGATTGAAGGAATAAGAGTATCAGGAACTA TAGGTTTGGCTGTGATAACAACAGTGATTATCAGTGTCTTTGCCCACGGGATCACTGCTGGCCCGGTAAGCAACTGGTAC GCCCGGATAATAGCAACGCTCCCTCCTGATGCTCCGGAAAAGGAAAGTGTGGAGGAACTAACGGCACTTCAGGGAATTGA AACTACTGAGAATATCCATAAAGAGCCTTATTGA
Upstream 100 bases:
>100_bases ATGCATGGAATTGCATGATATAAAGGGCAAATATAAGGGGGTTGTGTACCAGCCTTCCGGTAATTCTACGTAACATCTGG TAGATTTCCACAGGAAACAG
Downstream 100 bases:
>100_bases AGAAGTCAGAAGGATATTTAAAAAGAAGAGAGGAAACATCTGGTGATAACCACAGATACCCTGATAACAATTGGCAACAT CCTCATAAGGATTGTCGCAA
Product: Na(+)/H(+) antiporter
Products: NA
Alternate protein names: Na(+)/H(+) Antiporter; Na+/H+ Antiporter; Transporter CPA2 Family; NhaP-Type Na+/H+ And K+/H+ Antiporter Protein; CPA1 Family Na(+)/H(+) Antiporter; NhaP-Type Na+/H+ And K+/H+ Antiporter; Sodium/Hydrogen Exchanger Family Protein; Na+/H+ Antiporter CPA1 Family Protein; NhaP Family Na(+)/H(+) Antiporter
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MRPMASELTTFVLIFGTLLFVFGLFSRKIEGTVVTIQMIFLAAGILLSPIGLNLISLSPRSGLVLGVIKVALVLTFFSDA SLIGLHSLFLKERLSVRLLFLGLSLTICLGTVFAALLFADITFIDAILLGIILAPTDASLAQKVVEERQVPTLIRNGLII ESGLNDGAVMPLFIFVVALEAVEKLNRPLGTFLAIALEQIGFGIFVGIIIGLVGGWLFSRAFKAGSMSEVYYRTEFVALA LISWLVADGVGGNGFIAAFIAGLATRIEDRQVTEEEVILLPRAEGNVLNLAVLFILGVMSAEYLPLVDLKIFAYAVLSLT VVRMVPVTISLIGSHLNIKTGLFMGWFGPRGLASIVLMLITVERIEGIRVSGTIGLAVITTVIISVFAHGITAGPVSNWY ARIIATLPPDAPEKESVEELTALQGIETTENIHKEPY
Sequences:
>Translated_437_residues MRPMASELTTFVLIFGTLLFVFGLFSRKIEGTVVTIQMIFLAAGILLSPIGLNLISLSPRSGLVLGVIKVALVLTFFSDA SLIGLHSLFLKERLSVRLLFLGLSLTICLGTVFAALLFADITFIDAILLGIILAPTDASLAQKVVEERQVPTLIRNGLII ESGLNDGAVMPLFIFVVALEAVEKLNRPLGTFLAIALEQIGFGIFVGIIIGLVGGWLFSRAFKAGSMSEVYYRTEFVALA LISWLVADGVGGNGFIAAFIAGLATRIEDRQVTEEEVILLPRAEGNVLNLAVLFILGVMSAEYLPLVDLKIFAYAVLSLT VVRMVPVTISLIGSHLNIKTGLFMGWFGPRGLASIVLMLITVERIEGIRVSGTIGLAVITTVIISVFAHGITAGPVSNWY ARIIATLPPDAPEKESVEELTALQGIETTENIHKEPY >Mature_437_residues MRPMASELTTFVLIFGTLLFVFGLFSRKIEGTVVTIQMIFLAAGILLSPIGLNLISLSPRSGLVLGVIKVALVLTFFSDA SLIGLHSLFLKERLSVRLLFLGLSLTICLGTVFAALLFADITFIDAILLGIILAPTDASLAQKVVEERQVPTLIRNGLII ESGLNDGAVMPLFIFVVALEAVEKLNRPLGTFLAIALEQIGFGIFVGIIIGLVGGWLFSRAFKAGSMSEVYYRTEFVALA LISWLVADGVGGNGFIAAFIAGLATRIEDRQVTEEEVILLPRAEGNVLNLAVLFILGVMSAEYLPLVDLKIFAYAVLSLT VVRMVPVTISLIGSHLNIKTGLFMGWFGPRGLASIVLMLITVERIEGIRVSGTIGLAVITTVIISVFAHGITAGPVSNWY ARIIATLPPDAPEKESVEELTALQGIETTENIHKEPY
Specific function: Unknown
COG id: COG0025
COG function: function code P; NhaP-type Na+/H+ and K+/H+ antiporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46984; Mature: 46984
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPMASELTTFVLIFGTLLFVFGLFSRKIEGTVVTIQMIFLAAGILLSPIGLNLISLSPR CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCC SGLVLGVIKVALVLTFFSDASLIGLHSLFLKERLSVRLLFLGLSLTICLGTVFAALLFAD CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITFIDAILLGIILAPTDASLAQKVVEERQVPTLIRNGLIIESGLNDGAVMPLFIFVVALE HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHCCEEEECCCCCCCHHHHHHHHHHHH AVEKLNRPLGTFLAIALEQIGFGIFVGIIIGLVGGWLFSRAFKAGSMSEVYYRTEFVALA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LISWLVADGVGGNGFIAAFIAGLATRIEDRQVTEEEVILLPRAEGNVLNLAVLFILGVMS HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHC AEYLPLVDLKIFAYAVLSLTVVRMVPVTISLIGSHLNIKTGLFMGWFGPRGLASIVLMLI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEECCCCHHHHHHHHHHH TVERIEGIRVSGTIGLAVITTVIISVFAHGITAGPVSNWYARIIATLPPDAPEKESVEEL HHHHHCCEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHH TALQGIETTENIHKEPY HHHHCCCHHHHHCCCCC >Mature Secondary Structure MRPMASELTTFVLIFGTLLFVFGLFSRKIEGTVVTIQMIFLAAGILLSPIGLNLISLSPR CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCC SGLVLGVIKVALVLTFFSDASLIGLHSLFLKERLSVRLLFLGLSLTICLGTVFAALLFAD CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITFIDAILLGIILAPTDASLAQKVVEERQVPTLIRNGLIIESGLNDGAVMPLFIFVVALE HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHCCEEEECCCCCCCHHHHHHHHHHHH AVEKLNRPLGTFLAIALEQIGFGIFVGIIIGLVGGWLFSRAFKAGSMSEVYYRTEFVALA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LISWLVADGVGGNGFIAAFIAGLATRIEDRQVTEEEVILLPRAEGNVLNLAVLFILGVMS HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHC AEYLPLVDLKIFAYAVLSLTVVRMVPVTISLIGSHLNIKTGLFMGWFGPRGLASIVLMLI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEECCCCHHHHHHHHHHH TVERIEGIRVSGTIGLAVITTVIISVFAHGITAGPVSNWYARIIATLPPDAPEKESVEEL HHHHHCCEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHH TALQGIETTENIHKEPY HHHHCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA