| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227903
Identifier: 21227903
GI number: 21227903
Start: 2150204
End: 2150845
Strand: Direct
Name: 21227903
Synonym: MM_1801
Alternate gene names: NA
Gene position: 2150204-2150845 (Clockwise)
Preceding gene: 21227902
Following gene: 21227904
Centisome position: 52.49
GC content: 42.06
Gene sequence:
>642_bases ATGGTAGAATATCCTGAGATCGAAATACCGCCTGTCAGTAAAGAAAATCAGAATAGTGAAGATAAGCCCGGGAAAAACTA TGAAAAAAAAGATGAGGAGCAGGAGAAGCAGGGAAAAGAGCCTGATATTCGGTCAGGACCTCCCTCAGAAGAGTTCTGTA TCTCCTGCCTGAATATGCCTGAAGAGCAGCGTAAAACCATGCTTCTGGAGATCCAGCAGGCAGCTGAAAAGATTCTGAAA GCCTATAAAGTCATTAAAGAGCCCGAAGACCTTTTAAAGGGGGAATGGTTTCTCAAGCTTCAGAAGCCGGAATTTGAAAA GAAACTGGTTATTGCAAAGTCCGGAGAAGAAGTGTTTATAGGTTTTTATACCTATTCCGGAGAAACTCCTGTGCCTGATC CTAATTTCGTTTTACTTTCTCAATACGGGTTCTGGTATCCGCAGAGGATAGAGGAAAAATTTGAAGAAACGGTTGCCTCT TTCTTTACGGGAGCTTACGGAGACTACGATTTCCTTAATATTGTCCCTGAAGCCGTTGAAAAATTCCAGGCTTTTCAGCG TGATTTTGTAAAGATGCTCGAAGATCAGGAATGGGACGGGCAGGATGTAGAAGTTATTGAAAAAATTATGCCGAAGGATT AA
Upstream 100 bases:
>100_bases AATTGAATTCCGAAATGCCCGATTTCAATGATTATTACTCTGATCTATCCCAACGCTTATGGGCATCCCCCTCCTATATA CATTAACGGGGGTTCCAATC
Downstream 100 bases:
>100_bases GTTCCCATAAACCAGCCCTCCCAGAGAAATTATTTCCTTCCGTTTTTTCCAGGCTTTAATTTTTTTCTTTTATAACATCC TTACTGACTTTTTATTTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MVEYPEIEIPPVSKENQNSEDKPGKNYEKKDEEQEKQGKEPDIRSGPPSEEFCISCLNMPEEQRKTMLLEIQQAAEKILK AYKVIKEPEDLLKGEWFLKLQKPEFEKKLVIAKSGEEVFIGFYTYSGETPVPDPNFVLLSQYGFWYPQRIEEKFEETVAS FFTGAYGDYDFLNIVPEAVEKFQAFQRDFVKMLEDQEWDGQDVEVIEKIMPKD
Sequences:
>Translated_213_residues MVEYPEIEIPPVSKENQNSEDKPGKNYEKKDEEQEKQGKEPDIRSGPPSEEFCISCLNMPEEQRKTMLLEIQQAAEKILK AYKVIKEPEDLLKGEWFLKLQKPEFEKKLVIAKSGEEVFIGFYTYSGETPVPDPNFVLLSQYGFWYPQRIEEKFEETVAS FFTGAYGDYDFLNIVPEAVEKFQAFQRDFVKMLEDQEWDGQDVEVIEKIMPKD >Mature_213_residues MVEYPEIEIPPVSKENQNSEDKPGKNYEKKDEEQEKQGKEPDIRSGPPSEEFCISCLNMPEEQRKTMLLEIQQAAEKILK AYKVIKEPEDLLKGEWFLKLQKPEFEKKLVIAKSGEEVFIGFYTYSGETPVPDPNFVLLSQYGFWYPQRIEEKFEETVAS FFTGAYGDYDFLNIVPEAVEKFQAFQRDFVKMLEDQEWDGQDVEVIEKIMPKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24932; Mature: 24932
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEYPEIEIPPVSKENQNSEDKPGKNYEKKDEEQEKQGKEPDIRSGPPSEEFCISCLNMP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHCCC EEQRKTMLLEIQQAAEKILKAYKVIKEPEDLLKGEWFLKLQKPEFEKKLVIAKSGEEVFI HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEECCCCCCCEEEEEECCCEEEE GFYTYSGETPVPDPNFVLLSQYGFWYPQRIEEKFEETVASFFTGAYGDYDFLNIVPEAVE EEEEECCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH KFQAFQRDFVKMLEDQEWDGQDVEVIEKIMPKD HHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC >Mature Secondary Structure MVEYPEIEIPPVSKENQNSEDKPGKNYEKKDEEQEKQGKEPDIRSGPPSEEFCISCLNMP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHCCC EEQRKTMLLEIQQAAEKILKAYKVIKEPEDLLKGEWFLKLQKPEFEKKLVIAKSGEEVFI HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEECCCCCCCEEEEEECCCEEEE GFYTYSGETPVPDPNFVLLSQYGFWYPQRIEEKFEETVASFFTGAYGDYDFLNIVPEAVE EEEEECCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH KFQAFQRDFVKMLEDQEWDGQDVEVIEKIMPKD HHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA