Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227903

Identifier: 21227903

GI number: 21227903

Start: 2150204

End: 2150845

Strand: Direct

Name: 21227903

Synonym: MM_1801

Alternate gene names: NA

Gene position: 2150204-2150845 (Clockwise)

Preceding gene: 21227902

Following gene: 21227904

Centisome position: 52.49

GC content: 42.06

Gene sequence:

>642_bases
ATGGTAGAATATCCTGAGATCGAAATACCGCCTGTCAGTAAAGAAAATCAGAATAGTGAAGATAAGCCCGGGAAAAACTA
TGAAAAAAAAGATGAGGAGCAGGAGAAGCAGGGAAAAGAGCCTGATATTCGGTCAGGACCTCCCTCAGAAGAGTTCTGTA
TCTCCTGCCTGAATATGCCTGAAGAGCAGCGTAAAACCATGCTTCTGGAGATCCAGCAGGCAGCTGAAAAGATTCTGAAA
GCCTATAAAGTCATTAAAGAGCCCGAAGACCTTTTAAAGGGGGAATGGTTTCTCAAGCTTCAGAAGCCGGAATTTGAAAA
GAAACTGGTTATTGCAAAGTCCGGAGAAGAAGTGTTTATAGGTTTTTATACCTATTCCGGAGAAACTCCTGTGCCTGATC
CTAATTTCGTTTTACTTTCTCAATACGGGTTCTGGTATCCGCAGAGGATAGAGGAAAAATTTGAAGAAACGGTTGCCTCT
TTCTTTACGGGAGCTTACGGAGACTACGATTTCCTTAATATTGTCCCTGAAGCCGTTGAAAAATTCCAGGCTTTTCAGCG
TGATTTTGTAAAGATGCTCGAAGATCAGGAATGGGACGGGCAGGATGTAGAAGTTATTGAAAAAATTATGCCGAAGGATT
AA

Upstream 100 bases:

>100_bases
AATTGAATTCCGAAATGCCCGATTTCAATGATTATTACTCTGATCTATCCCAACGCTTATGGGCATCCCCCTCCTATATA
CATTAACGGGGGTTCCAATC

Downstream 100 bases:

>100_bases
GTTCCCATAAACCAGCCCTCCCAGAGAAATTATTTCCTTCCGTTTTTTCCAGGCTTTAATTTTTTTCTTTTATAACATCC
TTACTGACTTTTTATTTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MVEYPEIEIPPVSKENQNSEDKPGKNYEKKDEEQEKQGKEPDIRSGPPSEEFCISCLNMPEEQRKTMLLEIQQAAEKILK
AYKVIKEPEDLLKGEWFLKLQKPEFEKKLVIAKSGEEVFIGFYTYSGETPVPDPNFVLLSQYGFWYPQRIEEKFEETVAS
FFTGAYGDYDFLNIVPEAVEKFQAFQRDFVKMLEDQEWDGQDVEVIEKIMPKD

Sequences:

>Translated_213_residues
MVEYPEIEIPPVSKENQNSEDKPGKNYEKKDEEQEKQGKEPDIRSGPPSEEFCISCLNMPEEQRKTMLLEIQQAAEKILK
AYKVIKEPEDLLKGEWFLKLQKPEFEKKLVIAKSGEEVFIGFYTYSGETPVPDPNFVLLSQYGFWYPQRIEEKFEETVAS
FFTGAYGDYDFLNIVPEAVEKFQAFQRDFVKMLEDQEWDGQDVEVIEKIMPKD
>Mature_213_residues
MVEYPEIEIPPVSKENQNSEDKPGKNYEKKDEEQEKQGKEPDIRSGPPSEEFCISCLNMPEEQRKTMLLEIQQAAEKILK
AYKVIKEPEDLLKGEWFLKLQKPEFEKKLVIAKSGEEVFIGFYTYSGETPVPDPNFVLLSQYGFWYPQRIEEKFEETVAS
FFTGAYGDYDFLNIVPEAVEKFQAFQRDFVKMLEDQEWDGQDVEVIEKIMPKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24932; Mature: 24932

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEYPEIEIPPVSKENQNSEDKPGKNYEKKDEEQEKQGKEPDIRSGPPSEEFCISCLNMP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHCCC
EEQRKTMLLEIQQAAEKILKAYKVIKEPEDLLKGEWFLKLQKPEFEKKLVIAKSGEEVFI
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEECCCCCCCEEEEEECCCEEEE
GFYTYSGETPVPDPNFVLLSQYGFWYPQRIEEKFEETVASFFTGAYGDYDFLNIVPEAVE
EEEEECCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
KFQAFQRDFVKMLEDQEWDGQDVEVIEKIMPKD
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MVEYPEIEIPPVSKENQNSEDKPGKNYEKKDEEQEKQGKEPDIRSGPPSEEFCISCLNMP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHCCC
EEQRKTMLLEIQQAAEKILKAYKVIKEPEDLLKGEWFLKLQKPEFEKKLVIAKSGEEVFI
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEECCCCCCCEEEEEECCCEEEE
GFYTYSGETPVPDPNFVLLSQYGFWYPQRIEEKFEETVASFFTGAYGDYDFLNIVPEAVE
EEEEECCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
KFQAFQRDFVKMLEDQEWDGQDVEVIEKIMPKD
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA