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The map label for this gene is ypdP [H]

Identifier: 21227902

GI number: 21227902

Start: 2149409

End: 2150098

Strand: Direct

Name: ypdP [H]

Synonym: MM_1800

Alternate gene names: 21227902

Gene position: 2149409-2150098 (Clockwise)

Preceding gene: 21227901

Following gene: 21227903

Centisome position: 52.47

GC content: 44.2

Gene sequence:

>690_bases
TTGCTGACAATTTTCATCAGTTCTCTGCTCCTCGGAAACCTCCTGGGGGGCAAGCTGGTCGAGATCTTTGGAATCGTAAC
CTCTGTCGGCCTTTTCGGATACCCGCCTACCTTTCTTATTACGGATATCGTAGAAGAGGTAAAAGGAAGAGAAGTGACAA
AAATTTTCGTGCATGCAGGTTTTCTTTCACTTTGCATAGCCCTATTTTTCATATTTGTTAGCACAGGCCTTCCCCCTTCC
CCTCTATATCCTCATAATGAAGCTTATAATCACGTTTTTTCAGGTTCCCTGAGAATTATCCTGGCAAGCATGATAGCTTT
TCTCATAAGCCAGTACCACGACATCTGGGCTTTTAATTTCTGGAAGAAAAAAACAAATGGGAGATGCCTGTGGCTCAGGA
ATAATCTTTCAACAATTGTTTCCCAGCTTCTCGACTCTACCGTTTTTATGTTTATCGCTTTCTATCATGCAGGTCCTGAG
ATGGGCGCAGCTGCTATATTCTCCATGATTTTGCCGCTCTGGATTCTTAAGGTGATCTTTGCCCTTCTTGATACTCCATT
TGTATACCTTGGAGTAAAATGGCTCGCTTCCGGAGAGGAAAAAGAGAACCTGCATCCTGATGAGGGCAGAGAGACAGGAA
TAGTTAAAGGTCAGGAGACCCCCGGCTCCTTAAACCGATCAGGATTGTAG

Upstream 100 bases:

>100_bases
TTATTCATTCCCCAACAACCCCAAACAACCCCAAACAACCCCAAACCCCACCCAAAAACCCTGAGAATCCATGAAACCCA
TAGATTATAAAATCCAGATT

Downstream 100 bases:

>100_bases
ACTTAAATTGAATTCCGAAATGCCCGATTTCAATGATTATTACTCTGATCTATCCCAACGCTTATGGGCATCCCCCTCCT
ATATACATTAACGGGGGTTC

Product: transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MLTIFISSLLLGNLLGGKLVEIFGIVTSVGLFGYPPTFLITDIVEEVKGREVTKIFVHAGFLSLCIALFFIFVSTGLPPS
PLYPHNEAYNHVFSGSLRIILASMIAFLISQYHDIWAFNFWKKKTNGRCLWLRNNLSTIVSQLLDSTVFMFIAFYHAGPE
MGAAAIFSMILPLWILKVIFALLDTPFVYLGVKWLASGEEKENLHPDEGRETGIVKGQETPGSLNRSGL

Sequences:

>Translated_229_residues
MLTIFISSLLLGNLLGGKLVEIFGIVTSVGLFGYPPTFLITDIVEEVKGREVTKIFVHAGFLSLCIALFFIFVSTGLPPS
PLYPHNEAYNHVFSGSLRIILASMIAFLISQYHDIWAFNFWKKKTNGRCLWLRNNLSTIVSQLLDSTVFMFIAFYHAGPE
MGAAAIFSMILPLWILKVIFALLDTPFVYLGVKWLASGEEKENLHPDEGRETGIVKGQETPGSLNRSGL
>Mature_229_residues
MLTIFISSLLLGNLLGGKLVEIFGIVTSVGLFGYPPTFLITDIVEEVKGREVTKIFVHAGFLSLCIALFFIFVSTGLPPS
PLYPHNEAYNHVFSGSLRIILASMIAFLISQYHDIWAFNFWKKKTNGRCLWLRNNLSTIVSQLLDSTVFMFIAFYHAGPE
MGAAAIFSMILPLWILKVIFALLDTPFVYLGVKWLASGEEKENLHPDEGRETGIVKGQETPGSLNRSGL

Specific function: Unknown

COG id: COG1738

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003744 [H]

Pfam domain/function: PF02592 DUF165 [H]

EC number: NA

Molecular weight: Translated: 25476; Mature: 25476

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTIFISSLLLGNLLGGKLVEIFGIVTSVGLFGYPPTFLITDIVEEVKGREVTKIFVHAG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
FLSLCIALFFIFVSTGLPPSPLYPHNEAYNHVFSGSLRIILASMIAFLISQYHDIWAFNF
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WKKKTNGRCLWLRNNLSTIVSQLLDSTVFMFIAFYHAGPEMGAAAIFSMILPLWILKVIF
HHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
ALLDTPFVYLGVKWLASGEEKENLHPDEGRETGIVKGQETPGSLNRSGL
HHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLTIFISSLLLGNLLGGKLVEIFGIVTSVGLFGYPPTFLITDIVEEVKGREVTKIFVHAG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
FLSLCIALFFIFVSTGLPPSPLYPHNEAYNHVFSGSLRIILASMIAFLISQYHDIWAFNF
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WKKKTNGRCLWLRNNLSTIVSQLLDSTVFMFIAFYHAGPEMGAAAIFSMILPLWILKVIF
HHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
ALLDTPFVYLGVKWLASGEEKENLHPDEGRETGIVKGQETPGSLNRSGL
HHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]