Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227854

Identifier: 21227854

GI number: 21227854

Start: 2094693

End: 2095562

Strand: Direct

Name: 21227854

Synonym: MM_1752

Alternate gene names: NA

Gene position: 2094693-2095562 (Clockwise)

Preceding gene: 21227853

Following gene: 21227855

Centisome position: 51.14

GC content: 48.28

Gene sequence:

>870_bases
TTGCTTAAACGTGAAATTGCAAAGAGGGTTTTTGCAAAGGAATTTGAAGCCTGCAGGGAACTTGATAAATCCGAAAGACC
TGCGTCCGAAACAGCCGACTCAAAATCCCCAAACCTTCTTATCAGCCCTCTTGGTCTTATTCTCAACCGCGTTTTTGCAG
TCGGAGTGCTTACGGAACTTGACAGCATAGGCTTGCAGAACGAAATGTGGAAAGCCAGGATAGTTGATCCTACAGGGGCT
TTTACGGTATATGCAGGGCAGTTCCAGCCTGATGCTTCTATCTTCTTTTCAACGGTCCAGGTACCTGCTTTCATAGCACT
CACGGGAAAAGCCCGGATTTACGAACCTGAACCAGGCTCGGTTTTTGTTTCTATCAGGGCAGAAGAAGCGAATGTAGTGG
ATGAAGAGATACGCAACAGGTGGGTTGTTGATACCGCGGAGCAGACCACTGACAGGCTTGAGGCTTTTTCTGATGCACTT
GCAAGCGGATACCGCGGAGAAATACTCGGGGAATGCCTGCTAGAGAGGGGGATTTCCGAAGAGCTTGCCGAAGGGATTTC
CATTGCCCTTGAAAGGGAACGAGCCCCGCAGGAATTTGCAAAGCAGCTAAAGGCTTCTATTCGGGAAGGGCTTAAATCTC
TTAATCTTGAATCCGAAGATAATGAAGAAGCCAAGGCTGACCAGAAAGAGTTTGTACTTGAACTGCTCAGGGAAATGGGA
GGAGGCAAAGGAATTGATTATTCCGCTTTTGTAGACGCTGCAGTTTCAAGAGGTATACCCGAGGAGCTGGTGGAAGAAGT
CGTCCGCTCTCTTCTTGCAGGGGGGCAGTGCTACGAGCCGAAAATAGGTATCATAAGGCTTGTAGGTTAA

Upstream 100 bases:

>100_bases
CCTGAAGATGATCTTGCTGTCAGGGTTGTTGAACTGCTGCGCAGGCTCGGGCCGGATGAAGGAGAACAGAGCTCAGAAGT
TTCCAGGGAAGGGATAAGCT

Downstream 100 bases:

>100_bases
CCTGGAGAAAAGACTTTACAGGCTTTAGAAGTGAAGAATTCAGGTCTAAAAACATGTGATAACGCTTAAGTGTGATTAAG
TTGATTGGTATTCTTTGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MLKREIAKRVFAKEFEACRELDKSERPASETADSKSPNLLISPLGLILNRVFAVGVLTELDSIGLQNEMWKARIVDPTGA
FTVYAGQFQPDASIFFSTVQVPAFIALTGKARIYEPEPGSVFVSIRAEEANVVDEEIRNRWVVDTAEQTTDRLEAFSDAL
ASGYRGEILGECLLERGISEELAEGISIALERERAPQEFAKQLKASIREGLKSLNLESEDNEEAKADQKEFVLELLREMG
GGKGIDYSAFVDAAVSRGIPEELVEEVVRSLLAGGQCYEPKIGIIRLVG

Sequences:

>Translated_289_residues
MLKREIAKRVFAKEFEACRELDKSERPASETADSKSPNLLISPLGLILNRVFAVGVLTELDSIGLQNEMWKARIVDPTGA
FTVYAGQFQPDASIFFSTVQVPAFIALTGKARIYEPEPGSVFVSIRAEEANVVDEEIRNRWVVDTAEQTTDRLEAFSDAL
ASGYRGEILGECLLERGISEELAEGISIALERERAPQEFAKQLKASIREGLKSLNLESEDNEEAKADQKEFVLELLREMG
GGKGIDYSAFVDAAVSRGIPEELVEEVVRSLLAGGQCYEPKIGIIRLVG
>Mature_289_residues
MLKREIAKRVFAKEFEACRELDKSERPASETADSKSPNLLISPLGLILNRVFAVGVLTELDSIGLQNEMWKARIVDPTGA
FTVYAGQFQPDASIFFSTVQVPAFIALTGKARIYEPEPGSVFVSIRAEEANVVDEEIRNRWVVDTAEQTTDRLEAFSDAL
ASGYRGEILGECLLERGISEELAEGISIALERERAPQEFAKQLKASIREGLKSLNLESEDNEEAKADQKEFVLELLREMG
GGKGIDYSAFVDAAVSRGIPEELVEEVVRSLLAGGQCYEPKIGIIRLVG

Specific function: Unknown

COG id: COG3390

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31829; Mature: 31829

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKREIAKRVFAKEFEACRELDKSERPASETADSKSPNLLISPLGLILNRVFAVGVLTEL
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHH
DSIGLQNEMWKARIVDPTGAFTVYAGQFQPDASIFFSTVQVPAFIALTGKARIYEPEPGS
HHCCCCCHHCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHCEEEEEECCCEEECCCCCC
VFVSIRAEEANVVDEEIRNRWVVDTAEQTTDRLEAFSDALASGYRGEILGECLLERGISE
EEEEEECCCCHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHH
ELAEGISIALERERAPQEFAKQLKASIREGLKSLNLESEDNEEAKADQKEFVLELLREMG
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHC
GGKGIDYSAFVDAAVSRGIPEELVEEVVRSLLAGGQCYEPKIGIIRLVG
CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECC
>Mature Secondary Structure
MLKREIAKRVFAKEFEACRELDKSERPASETADSKSPNLLISPLGLILNRVFAVGVLTEL
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHH
DSIGLQNEMWKARIVDPTGAFTVYAGQFQPDASIFFSTVQVPAFIALTGKARIYEPEPGS
HHCCCCCHHCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHCEEEEEECCCEEECCCCCC
VFVSIRAEEANVVDEEIRNRWVVDTAEQTTDRLEAFSDALASGYRGEILGECLLERGISE
EEEEEECCCCHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHH
ELAEGISIALERERAPQEFAKQLKASIREGLKSLNLESEDNEEAKADQKEFVLELLREMG
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHC
GGKGIDYSAFVDAAVSRGIPEELVEEVVRSLLAGGQCYEPKIGIIRLVG
CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA