Click here to switch to the map view.

The map label for this gene is 21227853

Identifier: 21227853

GI number: 21227853

Start: 2093339

End: 2094700

Strand: Direct

Name: 21227853

Synonym: MM_1751

Alternate gene names: NA

Gene position: 2093339-2094700 (Clockwise)

Preceding gene: 21227851

Following gene: 21227854

Centisome position: 51.1

GC content: 48.46

Gene sequence:

>1362_bases
ATGGACGAGAAAATTGCGCCCCATCTTGAAGAGCTAACCAGGGCGCTTGGAGATCTTGAAAAAACCGGCATAAGGGCAGA
ATTTTATAAGCTTCTTGCTTTTCGCGTTTCGCCTGAGGTTGCAAAGGAGACTATACTCCGCAAGTTTGGTGGGAAAAGGA
AAATCCTGAAAGTAAAGGACCTTTCAGCTTCCCTTAAGAATTTTGAAATAACGGGCAGGATCCTTGACATGGGAGAAAAA
GCACTCCGCCCTCAGGAAGGAGTTCAGGACGGGCCTTCAAAACTGTATACAGGGATCCTTGCAGACGAAACGGGTTCTGT
CATGTTTTCTTCCTGGAAAGAACTTCCGGGCTCTATCGGGGATGTAATTAATATCAAAAATGCCTATACCCGCCTCTGGC
AGAACAGGATCAGGCTCTCTATCGGGGAACAGTCCCTGGTATCCGGGGTTTCCGACTCTTCCCTTCCAGGGCTATCCGAA
CTTTCTAAAACCCCTTTAAAGAAACTAATTGAAATAGGCTCTGCGGACTTTTCTGTAAGCACCACAGCCTGTGTACTCCA
GCTTTCCCACAGGGAAGTCCCTGTCAGGGGCAAGCAATCAAAAGTAATTTCTGGTGTGCTCGCGGATGAGACTGCCAGGC
TGCCTTTCACCGCCTGGGTTGAACTCCCCGGAATTGATATTGGGAGCATAATCAGGATAGAAGGAGCCCAGATCCGCATG
TTCAGAGGCATGCCTTCTATTAATTTTATAAGCAGCACCAGAATCTCTCCAGTACCTGCTGAAGAAGCTGAAAAGCTTGC
CTTTACTTTCGAATCCTCTTCAAAAGACCCTTCCCCTATAAAAATTGAAGAAATAGCCTCAAGGGACAGCATGTTCGATG
TGGTTACTGCAGGTAATATCGTCTCCGTCAGGCCGGGCTCGGGGATAATTTCACGATGTCCCGAATGCAGCCGTGTCATT
CAAAAATCAAACTGCAGGGTGCACGGCAGGGTGGAGGGCATAAGGGATATGCGGATTAAAGCCGTTCTGGACGACGGTAC
AGGGGCGATGTCGGTTATGTTTCCAAGGGAACTCGCAGAAATTATATACGGGAAGACACTTGAAGAAGCTGAACAGCTAA
TGTTTTCCGACATTTCTAAAGACGCTGTTTACGAAGACCTCAGGCGTTTCCTTACAGGCCGCTACCTGGCAGTTCGCGGG
AATTCCTCAAATGGAGAATATGGAGCCTCTTTTGTTGCGGAAAATGCCTGGGTGCCTGAAGATGATCTTGCTGTCAGGGT
TGTTGAACTGCTGCGCAGGCTCGGGCCGGATGAAGGAGAACAGAGCTCAGAAGTTTCCAGGGAAGGGATAAGCTTTGCTT
AA

Upstream 100 bases:

>100_bases
GCTCCAGATTAAAGGTTAAAACTCTTGAAATCTAAAATCCTTAAAACCTAAAAACCTTATATCTGAATTGTTTTATTATT
GTCTGAAATGGAGGCTTAAA

Downstream 100 bases:

>100_bases
ACGTGAAATTGCAAAGAGGGTTTTTGCAAAGGAATTTGAAGCCTGCAGGGAACTTGATAAATCCGAAAGACCTGCGTCCG
AAACAGCCGACTCAAAATCC

Product: replication factor A

Products: NA

Alternate protein names: Replication Protein A

Number of amino acids: Translated: 453; Mature: 453

Protein sequence:

>453_residues
MDEKIAPHLEELTRALGDLEKTGIRAEFYKLLAFRVSPEVAKETILRKFGGKRKILKVKDLSASLKNFEITGRILDMGEK
ALRPQEGVQDGPSKLYTGILADETGSVMFSSWKELPGSIGDVINIKNAYTRLWQNRIRLSIGEQSLVSGVSDSSLPGLSE
LSKTPLKKLIEIGSADFSVSTTACVLQLSHREVPVRGKQSKVISGVLADETARLPFTAWVELPGIDIGSIIRIEGAQIRM
FRGMPSINFISSTRISPVPAEEAEKLAFTFESSSKDPSPIKIEEIASRDSMFDVVTAGNIVSVRPGSGIISRCPECSRVI
QKSNCRVHGRVEGIRDMRIKAVLDDGTGAMSVMFPRELAEIIYGKTLEEAEQLMFSDISKDAVYEDLRRFLTGRYLAVRG
NSSNGEYGASFVAENAWVPEDDLAVRVVELLRRLGPDEGEQSSEVSREGISFA

Sequences:

>Translated_453_residues
MDEKIAPHLEELTRALGDLEKTGIRAEFYKLLAFRVSPEVAKETILRKFGGKRKILKVKDLSASLKNFEITGRILDMGEK
ALRPQEGVQDGPSKLYTGILADETGSVMFSSWKELPGSIGDVINIKNAYTRLWQNRIRLSIGEQSLVSGVSDSSLPGLSE
LSKTPLKKLIEIGSADFSVSTTACVLQLSHREVPVRGKQSKVISGVLADETARLPFTAWVELPGIDIGSIIRIEGAQIRM
FRGMPSINFISSTRISPVPAEEAEKLAFTFESSSKDPSPIKIEEIASRDSMFDVVTAGNIVSVRPGSGIISRCPECSRVI
QKSNCRVHGRVEGIRDMRIKAVLDDGTGAMSVMFPRELAEIIYGKTLEEAEQLMFSDISKDAVYEDLRRFLTGRYLAVRG
NSSNGEYGASFVAENAWVPEDDLAVRVVELLRRLGPDEGEQSSEVSREGISFA
>Mature_453_residues
MDEKIAPHLEELTRALGDLEKTGIRAEFYKLLAFRVSPEVAKETILRKFGGKRKILKVKDLSASLKNFEITGRILDMGEK
ALRPQEGVQDGPSKLYTGILADETGSVMFSSWKELPGSIGDVINIKNAYTRLWQNRIRLSIGEQSLVSGVSDSSLPGLSE
LSKTPLKKLIEIGSADFSVSTTACVLQLSHREVPVRGKQSKVISGVLADETARLPFTAWVELPGIDIGSIIRIEGAQIRM
FRGMPSINFISSTRISPVPAEEAEKLAFTFESSSKDPSPIKIEEIASRDSMFDVVTAGNIVSVRPGSGIISRCPECSRVI
QKSNCRVHGRVEGIRDMRIKAVLDDGTGAMSVMFPRELAEIIYGKTLEEAEQLMFSDISKDAVYEDLRRFLTGRYLAVRG
NSSNGEYGASFVAENAWVPEDDLAVRVVELLRRLGPDEGEQSSEVSREGISFA

Specific function: Unknown

COG id: COG1599

COG function: function code L; Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49791; Mature: 49791

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEKIAPHLEELTRALGDLEKTGIRAEFYKLLAFRVSPEVAKETILRKFGGKRKILKVKD
CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEC
LSASLKNFEITGRILDMGEKALRPQEGVQDGPSKLYTGILADETGSVMFSSWKELPGSIG
HHHHHHCEEEEHHHHHCCHHHCCCCCCCCCCHHHHHHHHEECCCCCHHHHHHHHCCCCHH
DVINIKNAYTRLWQNRIRLSIGEQSLVSGVSDSSLPGLSELSKTPLKKLIEIGSADFSVS
HHEEHHHHHHHHHHHHHEEEECHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
TTACVLQLSHREVPVRGKQSKVISGVLADETARLPFTAWVELPGIDIGSIIRIEGAQIRM
HHHEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEECCCEEEE
FRGMPSINFISSTRISPVPAEEAEKLAFTFESSSKDPSPIKIEEIASRDSMFDVVTAGNI
ECCCCCCCEECCCCCCCCCHHHHHHEEEEEECCCCCCCCEEHHHHHCCCCCEEEEECCCE
VSVRPGSGIISRCPECSRVIQKSNCRVHGRVEGIRDMRIKAVLDDGTGAMSVMFPRELAE
EEECCCCCHHHCCHHHHHHHHHCCCEEEEECCCCCCEEEEEEEECCCCCEEEECHHHHHH
IIYGKTLEEAEQLMFSDISKDAVYEDLRRFLTGRYLAVRGNSSNGEYGASFVAENAWVPE
HHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCCCCC
DDLAVRVVELLRRLGPDEGEQSSEVSREGISFA
HHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCC
>Mature Secondary Structure
MDEKIAPHLEELTRALGDLEKTGIRAEFYKLLAFRVSPEVAKETILRKFGGKRKILKVKD
CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEC
LSASLKNFEITGRILDMGEKALRPQEGVQDGPSKLYTGILADETGSVMFSSWKELPGSIG
HHHHHHCEEEEHHHHHCCHHHCCCCCCCCCCHHHHHHHHEECCCCCHHHHHHHHCCCCHH
DVINIKNAYTRLWQNRIRLSIGEQSLVSGVSDSSLPGLSELSKTPLKKLIEIGSADFSVS
HHEEHHHHHHHHHHHHHEEEECHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
TTACVLQLSHREVPVRGKQSKVISGVLADETARLPFTAWVELPGIDIGSIIRIEGAQIRM
HHHEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEECCCEEEE
FRGMPSINFISSTRISPVPAEEAEKLAFTFESSSKDPSPIKIEEIASRDSMFDVVTAGNI
ECCCCCCCEECCCCCCCCCHHHHHHEEEEEECCCCCCCCEEHHHHHCCCCCEEEEECCCE
VSVRPGSGIISRCPECSRVIQKSNCRVHGRVEGIRDMRIKAVLDDGTGAMSVMFPRELAE
EEECCCCCHHHCCHHHHHHHHHCCCEEEEECCCCCCEEEEEEEECCCCCEEEECHHHHHH
IIYGKTLEEAEQLMFSDISKDAVYEDLRRFLTGRYLAVRGNSSNGEYGASFVAENAWVPE
HHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCCCCC
DDLAVRVVELLRRLGPDEGEQSSEVSREGISFA
HHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA