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The map label for this gene is nirH [H]

Identifier: 21227841

GI number: 21227841

Start: 2080233

End: 2080709

Strand: Direct

Name: nirH [H]

Synonym: MM_1739

Alternate gene names: 21227841

Gene position: 2080233-2080709 (Clockwise)

Preceding gene: 21227840

Following gene: 21227842

Centisome position: 50.78

GC content: 44.03

Gene sequence:

>477_bases
TTGATATCAGGTGAAATTATGGATAAAACGGATGTAAAACTGTTAAAACTGGTGCAGGACGGAATTCCTATCACTCATTC
CCCTTTCAAAGGATTTGCTTCTGAACTTGGAATCAGTGAACAGGAGGTTGTTGACAGGCTTAAAAACCTCCAGAAAGCCG
GGAAGATCCGTCGCTTTGCGGCTTCAATCGGGCACAGAGCCATAGGCATAAAAGCCAATGCAATGTGTGTCTGGAATGTT
CCCGATGAGCAGATCGAAAAGGTAGGGAATATCATGGCTGAATTTCCCGAAGTCACGCACTGTTATGAACGCCCTCGCTA
TCCTGACTGGCAGTATAACCTGTTTACAATGGTCCATTCTTATAACCCTGAAGACTGCGAAAAAGTAGCTGAGAAAATTT
CGGAAGCTACCGGAATTAAGGACTACACCCTTTTCTTCAGCGAAAAAGAGTTCAAGAAAACCGGGGTAAGGCTTTAA

Upstream 100 bases:

>100_bases
AAAAACAGGCTTGAGGAGATTCTCAGTGAAATTCGGGAGAAAACAGGCTGTCCTCTTCTTGATCTTCCTACCAAGCACCT
GTTTAAGATTCAGGTAAAGT

Downstream 100 bases:

>100_bases
GGGCTGGCTGTAAAAGCTGGCTTTAAAGTATTTATTACCCGTTTATTATTCATTTATTACGTACTTATTACCCAATATCG
CTCATTTATTTCATTTACCC

Product: Heme biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MISGEIMDKTDVKLLKLVQDGIPITHSPFKGFASELGISEQEVVDRLKNLQKAGKIRRFAASIGHRAIGIKANAMCVWNV
PDEQIEKVGNIMAEFPEVTHCYERPRYPDWQYNLFTMVHSYNPEDCEKVAEKISEATGIKDYTLFFSEKEFKKTGVRL

Sequences:

>Translated_158_residues
MISGEIMDKTDVKLLKLVQDGIPITHSPFKGFASELGISEQEVVDRLKNLQKAGKIRRFAASIGHRAIGIKANAMCVWNV
PDEQIEKVGNIMAEFPEVTHCYERPRYPDWQYNLFTMVHSYNPEDCEKVAEKISEATGIKDYTLFFSEKEFKKTGVRL
>Mature_158_residues
MISGEIMDKTDVKLLKLVQDGIPITHSPFKGFASELGISEQEVVDRLKNLQKAGKIRRFAASIGHRAIGIKANAMCVWNV
PDEQIEKVGNIMAEFPEVTHCYERPRYPDWQYNLFTMVHSYNPEDCEKVAEKISEATGIKDYTLFFSEKEFKKTGVRL

Specific function: Unknown

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011991 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18042; Mature: 18042

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISGEIMDKTDVKLLKLVQDGIPITHSPFKGFASELGISEQEVVDRLKNLQKAGKIRRFA
CCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
ASIGHRAIGIKANAMCVWNVPDEQIEKVGNIMAEFPEVTHCYERPRYPDWQYNLFTMVHS
HHHCCCEECEECCCEEEECCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHHC
YNPEDCEKVAEKISEATGIKDYTLFFSEKEFKKTGVRL
CCHHHHHHHHHHHHHHCCCCHHHEEECHHHHHHCCCCC
>Mature Secondary Structure
MISGEIMDKTDVKLLKLVQDGIPITHSPFKGFASELGISEQEVVDRLKNLQKAGKIRRFA
CCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
ASIGHRAIGIKANAMCVWNVPDEQIEKVGNIMAEFPEVTHCYERPRYPDWQYNLFTMVHS
HHHCCCEECEECCCEEEECCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHHC
YNPEDCEKVAEKISEATGIKDYTLFFSEKEFKKTGVRL
CCHHHHHHHHHHHHHHCCCCHHHEEECHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8982003; 10984043 [H]