Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227826

Identifier: 21227826

GI number: 21227826

Start: 2068242

End: 2068670

Strand: Direct

Name: 21227826

Synonym: MM_1724

Alternate gene names: NA

Gene position: 2068242-2068670 (Clockwise)

Preceding gene: 21227825

Following gene: 21227827

Centisome position: 50.49

GC content: 36.83

Gene sequence:

>429_bases
GTGAGACAGAGTAAGGTATCTGTACATACTTTGCGCATAATAATTAATTTTTGGGAAGTTTTGGTGATAATAGGGGTAAA
AAATCAATATCTTTTTTTGATTCTAGTCCTGTTTTCAGGGCCCGCATTTGCAGATACTTTCCATGCACCTGGTCAGAATG
AAATTATAGAGGAAACGATTTACTGGGCAGAAATAGCCGTATATGATGTACCGTACTCTACTTGGCATAATAATTTGGAG
GAAACAATCTCTCTGCTCTTAAAACTAAATGAAGAATCCCTTAAAAACTATACAAATCCTGAAAGTCCGATATATGATCC
AAATGTACTAAAAGCGTATGGAAATGTTCCGGTAATTAAGAATACTTCCCAGCTGGACGAGTTCAGTTCAACCCTACAGG
CTAAAGAGATAGTTCTATCTGCGAGGTAA

Upstream 100 bases:

>100_bases
GTAGGATCAGGTATTAATCTGGCAAAGTACCGCACGGAAATTATAGATCGTGGTATAATTGACATGGGCCGGAATATTAT
GTTAATGAAACTCCTTAACA

Downstream 100 bases:

>100_bases
AACCATATCTTTATCCTGATGGCCCGATAGTTAACTGCGGTGCCGGCCCTATGCTCGGGTATTTTTTGATCAAACTCTAT
GACTATGAAGGTTAAAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MRQSKVSVHTLRIIINFWEVLVIIGVKNQYLFLILVLFSGPAFADTFHAPGQNEIIEETIYWAEIAVYDVPYSTWHNNLE
ETISLLLKLNEESLKNYTNPESPIYDPNVLKAYGNVPVIKNTSQLDEFSSTLQAKEIVLSAR

Sequences:

>Translated_142_residues
MRQSKVSVHTLRIIINFWEVLVIIGVKNQYLFLILVLFSGPAFADTFHAPGQNEIIEETIYWAEIAVYDVPYSTWHNNLE
ETISLLLKLNEESLKNYTNPESPIYDPNVLKAYGNVPVIKNTSQLDEFSSTLQAKEIVLSAR
>Mature_142_residues
MRQSKVSVHTLRIIINFWEVLVIIGVKNQYLFLILVLFSGPAFADTFHAPGQNEIIEETIYWAEIAVYDVPYSTWHNNLE
ETISLLLKLNEESLKNYTNPESPIYDPNVLKAYGNVPVIKNTSQLDEFSSTLQAKEIVLSAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16244; Mature: 16244

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQSKVSVHTLRIIINFWEVLVIIGVKNQYLFLILVLFSGPAFADTFHAPGQNEIIEETI
CCCCHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
YWAEIAVYDVPYSTWHNNLEETISLLLKLNEESLKNYTNPESPIYDPNVLKAYGNVPVIK
HHHHEEEEECCHHHHHCCHHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHCCCCCEEE
NTSQLDEFSSTLQAKEIVLSAR
CCHHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure
MRQSKVSVHTLRIIINFWEVLVIIGVKNQYLFLILVLFSGPAFADTFHAPGQNEIIEETI
CCCCHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
YWAEIAVYDVPYSTWHNNLEETISLLLKLNEESLKNYTNPESPIYDPNVLKAYGNVPVIK
HHHHEEEEECCHHHHHCCHHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHCCCCCEEE
NTSQLDEFSSTLQAKEIVLSAR
CCHHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA