Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227818

Identifier: 21227818

GI number: 21227818

Start: 2059782

End: 2060597

Strand: Reverse

Name: 21227818

Synonym: MM_1716

Alternate gene names: NA

Gene position: 2060597-2059782 (Counterclockwise)

Preceding gene: 21227823

Following gene: 21227810

Centisome position: 50.3

GC content: 38.11

Gene sequence:

>816_bases
ATGAATCATTTCGAAATTTATAAGAAGATGGATGATGACGTTCAGGCAATATACAGGTCAAGACTTCTAACAGAGATACT
TCTATCATTAAACGAGGGCAGTAAAAAGCTTCCCCAACTGCGTGAAATTACCGGAAGCACGTCTCAGGCACTGATTCCGA
AGCTCAGGAAACTCGAAGCAGATCATCTGATAGAAACAAAAGAACATGAGTATTTCCTGACGTCAGCAGGAAAAATTGTG
GCTTCAGGAATAGCTGACTCTTTTGTAACATTTTGGACGATTAATAAGTTTAAGCATTTCTGGTTGAGACATTACCTCGA
AGAAATTCCAATTCCTCTGTTAAAAGAAATCGGATGTCTTTATGAGTCTGAAATCCTCAAGAATCGAGGCATGGAGATCC
TTAATATCTATAACAACCAGTTAAAAATGATTAAAGAAGCAGATCATATATACGGTATATCGTCCGTGGTAACCAAAGGA
GATACCGATTCTATTTCTGAAAGGGTGAAAGAAGGAGTCCCTGTCGAGCTTATAGTTCCTCTTCACGTTGCAGAAGAATT
GAAGCGATCACCTTATCTGAAAAAAATAGAAGCACTGAAAGATTATGAAAACTTCAAATTAATGGTCATGGATGAAGATA
TTAAAGTTGGGCTCATTGTTACGGATAAACGCCTTTCTCTGAATCTGTACAAAAAAGAAGGTATTGAGTACGACATAAGC
ACAGGCCTGTTCAGCTTTGACTCGAAGGCCATTGAATGGGGAGAGATGCTTTTCTGGTATTGTAAAGGGAAGGCAGATTT
TATAAAATTTCAGTGA

Upstream 100 bases:

>100_bases
GATAGCAACATACATGCCCCAAAAAAAGAAAAGAATATATTACGTCAAAACAATTTAATAAGAAAGTGAAGAAAAAAATC
TGTAGATGCGGCAACAGGAA

Downstream 100 bases:

>100_bases
TGTAGAAACTTGTTAGAGAAAAATCTGGACAAGCCTCTTCAAACAGTTCCTATCATTATCATTATTGGAGCCTCGTTATC
CCAATCTATTACTATAATAG

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MNHFEIYKKMDDDVQAIYRSRLLTEILLSLNEGSKKLPQLREITGSTSQALIPKLRKLEADHLIETKEHEYFLTSAGKIV
ASGIADSFVTFWTINKFKHFWLRHYLEEIPIPLLKEIGCLYESEILKNRGMEILNIYNNQLKMIKEADHIYGISSVVTKG
DTDSISERVKEGVPVELIVPLHVAEELKRSPYLKKIEALKDYENFKLMVMDEDIKVGLIVTDKRLSLNLYKKEGIEYDIS
TGLFSFDSKAIEWGEMLFWYCKGKADFIKFQ

Sequences:

>Translated_271_residues
MNHFEIYKKMDDDVQAIYRSRLLTEILLSLNEGSKKLPQLREITGSTSQALIPKLRKLEADHLIETKEHEYFLTSAGKIV
ASGIADSFVTFWTINKFKHFWLRHYLEEIPIPLLKEIGCLYESEILKNRGMEILNIYNNQLKMIKEADHIYGISSVVTKG
DTDSISERVKEGVPVELIVPLHVAEELKRSPYLKKIEALKDYENFKLMVMDEDIKVGLIVTDKRLSLNLYKKEGIEYDIS
TGLFSFDSKAIEWGEMLFWYCKGKADFIKFQ
>Mature_271_residues
MNHFEIYKKMDDDVQAIYRSRLLTEILLSLNEGSKKLPQLREITGSTSQALIPKLRKLEADHLIETKEHEYFLTSAGKIV
ASGIADSFVTFWTINKFKHFWLRHYLEEIPIPLLKEIGCLYESEILKNRGMEILNIYNNQLKMIKEADHIYGISSVVTKG
DTDSISERVKEGVPVELIVPLHVAEELKRSPYLKKIEALKDYENFKLMVMDEDIKVGLIVTDKRLSLNLYKKEGIEYDIS
TGLFSFDSKAIEWGEMLFWYCKGKADFIKFQ

Specific function: Unknown

COG id: COG4742

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31480; Mature: 31480

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHFEIYKKMDDDVQAIYRSRLLTEILLSLNEGSKKLPQLREITGSTSQALIPKLRKLEA
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHCHHHHHHCCCCHHHHHHHHHHCCH
DHLIETKEHEYFLTSAGKIVASGIADSFVTFWTINKFKHFWLRHYLEEIPIPLLKEIGCL
HHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
YESEILKNRGMEILNIYNNQLKMIKEADHIYGISSVVTKGDTDSISERVKEGVPVELIVP
HHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEC
LHVAEELKRSPYLKKIEALKDYENFKLMVMDEDIKVGLIVTDKRLSLNLYKKEGIEYDIS
HHHHHHHHHCHHHHHHHHHHCCCCCEEEEEECCCEEEEEEECCCEEEEEHHHCCCCEECC
TGLFSFDSKAIEWGEMLFWYCKGKADFIKFQ
CCEECCCCHHHHHHHEEEEEECCCCCEEECC
>Mature Secondary Structure
MNHFEIYKKMDDDVQAIYRSRLLTEILLSLNEGSKKLPQLREITGSTSQALIPKLRKLEA
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHCHHHHHHCCCCHHHHHHHHHHCCH
DHLIETKEHEYFLTSAGKIVASGIADSFVTFWTINKFKHFWLRHYLEEIPIPLLKEIGCL
HHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
YESEILKNRGMEILNIYNNQLKMIKEADHIYGISSVVTKGDTDSISERVKEGVPVELIVP
HHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEC
LHVAEELKRSPYLKKIEALKDYENFKLMVMDEDIKVGLIVTDKRLSLNLYKKEGIEYDIS
HHHHHHHHHCHHHHHHHHHHCCCCCEEEEEECCCEEEEEEECCCEEEEEHHHCCCCEECC
TGLFSFDSKAIEWGEMLFWYCKGKADFIKFQ
CCEECCCCHHHHHHHEEEEEECCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA