| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is aroC
Identifier: 21227814
GI number: 21227814
Start: 2054237
End: 2055334
Strand: Direct
Name: aroC
Synonym: MM_1712
Alternate gene names: 21227814
Gene position: 2054237-2055334 (Clockwise)
Preceding gene: 21227813
Following gene: 21227815
Centisome position: 50.15
GC content: 54.19
Gene sequence:
>1098_bases ATGGCTGGAAACGTTTTCGGGCAGATGTTTCGAATCACGACCTGGGGGGAGTCCCACGGCAGGGCTGTCGGAGTTGTTGT TGACGGGCTGCCTGCAGGGCTTCCTTTTTCCGAAGCCGACATCCAGAAAGAGCTGGACAGGCGGCGTCCGGGACAGAGCG AGGTCTCCACACCTCGAAGCGAGGCTGACAGTGTGGAAATACTCTCCGGAATTTTCGAGGGCAAGAGCACGGGGACTCCC ATCTCCATGCTTGTCTGGAACTCGGATGCCAGGTCTTCTTCTTATGATGCCATTAAAAATACTCCCCGCCCGGGACATGC TGATTTTACCTACATTGCCCGCTACGGAATTCGGGACCACCGCGGAGGAGGCAGGTCTTCAGCTCGCGAAACTATAGGAA GGGTTGCAGGCGGTGCCCTTGCAAAGCTTTTACTTTCCCATTACGGAATCCGGATTGTTGGACACGTTCTCGAACTCGGC GGGATCCGGGCAAAATCACTCTCTTTTGAAGAAATCCTTGAAAATGTTGAAAGAACTCCTGTTCGCTGCGCAGACCCCGA AGCTGCAAAGAAAATGCTTGAAAAGGTTTCAGCCCTCCGGCAGGAAGGAGACAGCGCGGGCGGAATTGTCGAGGTAATGG TGAAAGGAGTCCCCGCAGGTCTCGGAGAACCCGTTTTTGACAGGCTTGATGCAGACCTTGCAAAAGCTCTTATGAGCATT CCCGCAGTCAAAGGCTTTGAAATCGGAGCCGGGTTTGAGGCTGCCCGTATGCGCGGAAGTGAAATGAACGATTCCTTCCT CATGGAAGACGGAAAAGTTACCTGTTCGAGCAATAACGCAGGCGGCATCCTCGGAGGGATTTCCTCGGGCCTGGACATCG TCTGCCGTGTAGCAGTAAAGCCCACCCCTTCCATAAGTAAACTTCAGCAAACGGTTGATCTCACAACCCGGGAAAATGCC GAAATAGCGATTAAAGGACGGCATGACCCCACGATTCCTCCGCGCATGGTGCCGGTTGCAGAAGCCATGGTTGCCCTCGT GTTTGCCGACCATATGCTCAGAAGCGGCTTTATCAATCCCAGGACCCTGTTAGGGTGA
Upstream 100 bases:
>100_bases AAATGCTGAAAGCCGAATATAATGATGTTACTGATGTGGTTGTGCACCTTGAACCTGCCTTACCCCAAGGATCATATAGC AAAAAAACCACTTAAGATGC
Downstream 100 bases:
>100_bases AGAAATAAGCATAATTTAGCTTGTATCCTCCGGTTTGCTTCGATAATAAACACTCCAAACCACAAATCATCTTTCTTAGC ATGAAAGTACTTCCGGATAC
Product: chorismate synthase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate phospholyase
Number of amino acids: Translated: 365; Mature: 364
Protein sequence:
>365_residues MAGNVFGQMFRITTWGESHGRAVGVVVDGLPAGLPFSEADIQKELDRRRPGQSEVSTPRSEADSVEILSGIFEGKSTGTP ISMLVWNSDARSSSYDAIKNTPRPGHADFTYIARYGIRDHRGGGRSSARETIGRVAGGALAKLLLSHYGIRIVGHVLELG GIRAKSLSFEEILENVERTPVRCADPEAAKKMLEKVSALRQEGDSAGGIVEVMVKGVPAGLGEPVFDRLDADLAKALMSI PAVKGFEIGAGFEAARMRGSEMNDSFLMEDGKVTCSSNNAGGILGGISSGLDIVCRVAVKPTPSISKLQQTVDLTTRENA EIAIKGRHDPTIPPRMVPVAEAMVALVFADHMLRSGFINPRTLLG
Sequences:
>Translated_365_residues MAGNVFGQMFRITTWGESHGRAVGVVVDGLPAGLPFSEADIQKELDRRRPGQSEVSTPRSEADSVEILSGIFEGKSTGTP ISMLVWNSDARSSSYDAIKNTPRPGHADFTYIARYGIRDHRGGGRSSARETIGRVAGGALAKLLLSHYGIRIVGHVLELG GIRAKSLSFEEILENVERTPVRCADPEAAKKMLEKVSALRQEGDSAGGIVEVMVKGVPAGLGEPVFDRLDADLAKALMSI PAVKGFEIGAGFEAARMRGSEMNDSFLMEDGKVTCSSNNAGGILGGISSGLDIVCRVAVKPTPSISKLQQTVDLTTRENA EIAIKGRHDPTIPPRMVPVAEAMVALVFADHMLRSGFINPRTLLG >Mature_364_residues AGNVFGQMFRITTWGESHGRAVGVVVDGLPAGLPFSEADIQKELDRRRPGQSEVSTPRSEADSVEILSGIFEGKSTGTPI SMLVWNSDARSSSYDAIKNTPRPGHADFTYIARYGIRDHRGGGRSSARETIGRVAGGALAKLLLSHYGIRIVGHVLELGG IRAKSLSFEEILENVERTPVRCADPEAAKKMLEKVSALRQEGDSAGGIVEVMVKGVPAGLGEPVFDRLDADLAKALMSIP AVKGFEIGAGFEAARMRGSEMNDSFLMEDGKVTCSSNNAGGILGGISSGLDIVCRVAVKPTPSISKLQQTVDLTTRENAE IAIKGRHDPTIPPRMVPVAEAMVALVFADHMLRSGFINPRTLLG
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; seventh step. [C]
COG id: COG0082
COG function: function code E; Chorismate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chorismate synthase family
Homologues:
Organism=Escherichia coli, GI1788669, Length=356, Percent_Identity=54.4943820224719, Blast_Score=344, Evalue=4e-96, Organism=Saccharomyces cerevisiae, GI6321290, Length=363, Percent_Identity=47.3829201101928, Blast_Score=336, Evalue=3e-93,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROC_METMA (Q8PW84)
Other databases:
- EMBL: AE008384 - RefSeq: NP_633736.1 - ProteinModelPortal: Q8PW84 - GeneID: 1480054 - GenomeReviews: AE008384_GR - KEGG: mma:MM_1712 - NMPDR: fig|192952.1.peg.1712 - HOGENOM: HBG292336 - OMA: SRFTTQR - ProtClustDB: PRK05382 - BioCyc: MMAZ192952:MM1712-MONOMER - BRENDA: 4.2.3.5 - HAMAP: MF_00300_A - InterPro: IPR000453 - InterPro: IPR020541 - PANTHER: PTHR21085 - PIRSF: PIRSF001456 - TIGRFAMs: TIGR00033
Pfam domain/function: PF01264 Chorismate_synt; SSF103263 Chorismate_synth
EC number: =4.2.3.5
Molecular weight: Translated: 38878; Mature: 38747
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: PS00787 CHORISMATE_SYNTHASE_1; PS00788 CHORISMATE_SYNTHASE_2; PS00789 CHORISMATE_SYNTHASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGNVFGQMFRITTWGESHGRAVGVVVDGLPAGLPFSEADIQKELDRRRPGQSEVSTPRS CCCCHHHHEEEEEECCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC EADSVEILSGIFEGKSTGTPISMLVWNSDARSSSYDAIKNTPRPGHADFTYIARYGIRDH CHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCCCCHHHHHHHCCCCC RGGGRSSARETIGRVAGGALAKLLLSHYGIRIVGHVLELGGIRAKSLSFEEILENVERTP CCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC VRCADPEAAKKMLEKVSALRQEGDSAGGIVEVMVKGVPAGLGEPVFDRLDADLAKALMSI CCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHC PAVKGFEIGAGFEAARMRGSEMNDSFLMEDGKVTCSSNNAGGILGGISSGLDIVCRVAVK CCCCCEECCCCCHHHHHCCCCCCCCEEECCCEEEECCCCCCCCHHCHHCCCEEEEEEECC PTPSISKLQQTVDLTTRENAEIAIKGRHDPTIPPRMVPVAEAMVALVFADHMLRSGFINP CCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC RTLLG HHCCC >Mature Secondary Structure AGNVFGQMFRITTWGESHGRAVGVVVDGLPAGLPFSEADIQKELDRRRPGQSEVSTPRS CCCHHHHEEEEEECCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC EADSVEILSGIFEGKSTGTPISMLVWNSDARSSSYDAIKNTPRPGHADFTYIARYGIRDH CHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCCCCHHHHHHHCCCCC RGGGRSSARETIGRVAGGALAKLLLSHYGIRIVGHVLELGGIRAKSLSFEEILENVERTP CCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC VRCADPEAAKKMLEKVSALRQEGDSAGGIVEVMVKGVPAGLGEPVFDRLDADLAKALMSI CCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHC PAVKGFEIGAGFEAARMRGSEMNDSFLMEDGKVTCSSNNAGGILGGISSGLDIVCRVAVK CCCCCEECCCCCHHHHHCCCCCCCCEEECCCEEEECCCCCCCCHHCHHCCCEEEEEEECC PTPSISKLQQTVDLTTRENAEIAIKGRHDPTIPPRMVPVAEAMVALVFADHMLRSGFINP CCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC RTLLG HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12125824