| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227815
Identifier: 21227815
GI number: 21227815
Start: 2055906
End: 2058182
Strand: Direct
Name: 21227815
Synonym: MM_1713
Alternate gene names: NA
Gene position: 2055906-2058182 (Clockwise)
Preceding gene: 21227814
Following gene: 21227816
Centisome position: 50.19
GC content: 41.63
Gene sequence:
>2277_bases ATGTTACTTACACTTGAATCAGGCTGCATCGACAGTAGCAACGGGCCGATAAATGAGACAAGACCGGAAGAATCAATAGA TGATCAGGAAAGTTCATTTAATGATATCGTAGAAACCGCTCCTGAAAAAACCTTTTCTGTAAAGAATAATACTCTTGAAA AGCAAAGCTTTTTTTCCGGATATTACAGTAAAGAAAATCTGCAGTTTGAGCCTGCAGTTCCAGCTTATTCTCTGCCCCTT AAGGCTTCCGAAATTGCAAATTATGATGAGTTTACTCAGAAAATTTTCTTTACAAAAGAAAGCAAGGATTTGCTGTACAA AAATGGATTTGTTGTACTCGATAATGAAGACGATAGTGAAGGTCCCAAAAATCAATTGATATCAGGGCAGACACTGGTGA ATGAAACTTACAGGAGCCTGAAAGTGGCTGATGTTCCTATTTTCATCACGTCGGATTCCCTTCTTCACCTTTATCATATC CAGTTTGATGAGACGCTAAAAAGGGTAGAAGCTGAGGAATTTTACGATGAACTCTGGAAACTTGACAAAGCCCTCTTTGA AGCTTCCATAGAGGATTATAACAGTGCGTCAGGAGTAGAAAAGGAAGCTGCAAGAAGAAATGTTGCATATTTTGCAGTTG CTTTAAGTCTTCTTCAGCCGAAACCCGAACAGACAGAGAAGTCACGGGAAGATCCAGAGAAAGTTACACTCTTCGATCCT CAGGACATAAAAGAATACAGTGTCGAAATCCCTCCATTTGTAAAAGATAATGTGGAGGCTGAACTCGTTTTGATAGGAGC TCAAAAAGAGGAAATATCTCCAATTTTCAAGTACGTTGAAGATTACTCTCAGTACTCTCCGCGGGGACACTATACATCTT CTGAGAAACTAAAAAACTACTTCAAAGCCATGATGTGGCATGGCAGAATAAGTATGCTCCTTCAGTCGAAAATGATTATT GCAGAAGAATCAATGGTAGAAGAATTAGCTGCAGATTCTTCGGAAAAGGAAGCGAGAATTCAAACTATACAGGCTCTTTT AATTTCTGATCACTTTGACAGGGATAAGAACATCCGGGATAGATGGGATCGAATTTACAATGTGACGGCTTTCTATGTTG GTTTTTCCGATGATCTCGGGCCCTATGAATATGCGAAAGCTCTGGATACTGTTTTTGGTAATTATAGATCCGGAGTGAGT TTAGATAATGAAAGCCTTGCAGAACTGATAACTGAGCTGGATAAATATGAAAGTCCGAAAATCTATGGGGGAACGGGGGA AATAATTCCAGCAGGTTCTGAAACTGAAAATGAGACTCTTGAAGCCACAAAAGGTTTCCGGTTCATGGGGCAGAGATACA CACCTGACTCGTATATCCTTCAGAAACTCAATCCTCCTGCCCTGAACATCATGGATCTCCTTGGTTCTGAAAGAGCCCGC GAACACCTGAGAAATATGGGTATTGCCGAAAGCGAAGTATACAAAACACGCCATTTGTCTCTTGAAACAGAATTTGGAGC TTTTAATGAAGATGACTGGAATAAAAACCTTTACTGGGCTCAACTATACGCCTTAAAGCCTCTCTTTACACGCTATCCTG AGGGTTACCCTACTTTCATGCAAACCGAAGCATGGGAAGACAAGCAGCTTAACACTGCCCTTGCCTCCTGGACCGAACTC AGGCATGATACCATTCTCTATGCAAAACAGACCTACTTCCTGGGTGCTCCTCAAATTCAGGAAGAAAAACCTGTGGAGGG ATATGTGGAGCCAGTTCCTGAATTCTATGCCAGGATGCTCGCCCTTACAAAAATGGCACACAACGGTCTTGCTGAAATGG AAGTGCTTGACGAGCAGTCTGATAAAGATTTTACAACTCTTGAAAATACCCTTGAAAAACTGCTGGAAATCTCGATTAAA GAACTTGAAGATAAAGAGTTAACAGATGCAGAGTACAAATTCATCCGAAACTTCGGACAAAACATATCTCCAATGCTTGA AAATGTGGATATAAAGTCCCAGAGCTCCATTCTGGTTGCGGATGTTCATACAGGTCCCGGAGGGAGCGTTCTGGAAGAAG GGACAGGGAAACTGGACCTGATGATAGTAGCGTACAAACAGCCTGACGGCAGGATCGTACTCGGTACAGGTCCTGTGATG AGTTATTATGAGTTCTGGCAGCCTTCAGGAGAAAGGTTAACAGATGAAGAATGGAGAAAAATGTTGAATGATAACCCTCC TGAAAGGCCTGAATGGGTGAGTTCATTCAGGGTATAA
Upstream 100 bases:
>100_bases GGATCTTAGATTTTTAATTTTTTGAATCCGTTTGTTTAATTCAAAATACGAGGGATCTTTCTTGAAATTAAAAGTGGTAA TAGCAGCCTTTCTGCTGACA
Downstream 100 bases:
>100_bases AAGATGCTACTTTCAATAGTTTTTCTTCTCTCTCACTTTCCTTTTTATGGAATACTTACGTATTTCGGAAAAAGAAGTAA CATATCAGGTTCCTATAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 758; Mature: 758
Protein sequence:
>758_residues MLLTLESGCIDSSNGPINETRPEESIDDQESSFNDIVETAPEKTFSVKNNTLEKQSFFSGYYSKENLQFEPAVPAYSLPL KASEIANYDEFTQKIFFTKESKDLLYKNGFVVLDNEDDSEGPKNQLISGQTLVNETYRSLKVADVPIFITSDSLLHLYHI QFDETLKRVEAEEFYDELWKLDKALFEASIEDYNSASGVEKEAARRNVAYFAVALSLLQPKPEQTEKSREDPEKVTLFDP QDIKEYSVEIPPFVKDNVEAELVLIGAQKEEISPIFKYVEDYSQYSPRGHYTSSEKLKNYFKAMMWHGRISMLLQSKMII AEESMVEELAADSSEKEARIQTIQALLISDHFDRDKNIRDRWDRIYNVTAFYVGFSDDLGPYEYAKALDTVFGNYRSGVS LDNESLAELITELDKYESPKIYGGTGEIIPAGSETENETLEATKGFRFMGQRYTPDSYILQKLNPPALNIMDLLGSERAR EHLRNMGIAESEVYKTRHLSLETEFGAFNEDDWNKNLYWAQLYALKPLFTRYPEGYPTFMQTEAWEDKQLNTALASWTEL RHDTILYAKQTYFLGAPQIQEEKPVEGYVEPVPEFYARMLALTKMAHNGLAEMEVLDEQSDKDFTTLENTLEKLLEISIK ELEDKELTDAEYKFIRNFGQNISPMLENVDIKSQSSILVADVHTGPGGSVLEEGTGKLDLMIVAYKQPDGRIVLGTGPVM SYYEFWQPSGERLTDEEWRKMLNDNPPERPEWVSSFRV
Sequences:
>Translated_758_residues MLLTLESGCIDSSNGPINETRPEESIDDQESSFNDIVETAPEKTFSVKNNTLEKQSFFSGYYSKENLQFEPAVPAYSLPL KASEIANYDEFTQKIFFTKESKDLLYKNGFVVLDNEDDSEGPKNQLISGQTLVNETYRSLKVADVPIFITSDSLLHLYHI QFDETLKRVEAEEFYDELWKLDKALFEASIEDYNSASGVEKEAARRNVAYFAVALSLLQPKPEQTEKSREDPEKVTLFDP QDIKEYSVEIPPFVKDNVEAELVLIGAQKEEISPIFKYVEDYSQYSPRGHYTSSEKLKNYFKAMMWHGRISMLLQSKMII AEESMVEELAADSSEKEARIQTIQALLISDHFDRDKNIRDRWDRIYNVTAFYVGFSDDLGPYEYAKALDTVFGNYRSGVS LDNESLAELITELDKYESPKIYGGTGEIIPAGSETENETLEATKGFRFMGQRYTPDSYILQKLNPPALNIMDLLGSERAR EHLRNMGIAESEVYKTRHLSLETEFGAFNEDDWNKNLYWAQLYALKPLFTRYPEGYPTFMQTEAWEDKQLNTALASWTEL RHDTILYAKQTYFLGAPQIQEEKPVEGYVEPVPEFYARMLALTKMAHNGLAEMEVLDEQSDKDFTTLENTLEKLLEISIK ELEDKELTDAEYKFIRNFGQNISPMLENVDIKSQSSILVADVHTGPGGSVLEEGTGKLDLMIVAYKQPDGRIVLGTGPVM SYYEFWQPSGERLTDEEWRKMLNDNPPERPEWVSSFRV >Mature_758_residues MLLTLESGCIDSSNGPINETRPEESIDDQESSFNDIVETAPEKTFSVKNNTLEKQSFFSGYYSKENLQFEPAVPAYSLPL KASEIANYDEFTQKIFFTKESKDLLYKNGFVVLDNEDDSEGPKNQLISGQTLVNETYRSLKVADVPIFITSDSLLHLYHI QFDETLKRVEAEEFYDELWKLDKALFEASIEDYNSASGVEKEAARRNVAYFAVALSLLQPKPEQTEKSREDPEKVTLFDP QDIKEYSVEIPPFVKDNVEAELVLIGAQKEEISPIFKYVEDYSQYSPRGHYTSSEKLKNYFKAMMWHGRISMLLQSKMII AEESMVEELAADSSEKEARIQTIQALLISDHFDRDKNIRDRWDRIYNVTAFYVGFSDDLGPYEYAKALDTVFGNYRSGVS LDNESLAELITELDKYESPKIYGGTGEIIPAGSETENETLEATKGFRFMGQRYTPDSYILQKLNPPALNIMDLLGSERAR EHLRNMGIAESEVYKTRHLSLETEFGAFNEDDWNKNLYWAQLYALKPLFTRYPEGYPTFMQTEAWEDKQLNTALASWTEL RHDTILYAKQTYFLGAPQIQEEKPVEGYVEPVPEFYARMLALTKMAHNGLAEMEVLDEQSDKDFTTLENTLEKLLEISIK ELEDKELTDAEYKFIRNFGQNISPMLENVDIKSQSSILVADVHTGPGGSVLEEGTGKLDLMIVAYKQPDGRIVLGTGPVM SYYEFWQPSGERLTDEEWRKMLNDNPPERPEWVSSFRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86936; Mature: 86936
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLTLESGCIDSSNGPINETRPEESIDDQESSFNDIVETAPEKTFSVKNNTLEKQSFFSG CEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHC YYSKENLQFEPAVPAYSLPLKASEIANYDEFTQKIFFTKESKDLLYKNGFVVLDNEDDSE CCCCCCCEECCCCCCEECCCCHHHHCCHHHHHHHHEEECCCCCCEEECCEEEEECCCCCC GPKNQLISGQTLVNETYRSLKVADVPIFITSDSLLHLYHIQFDETLKRVEAEEFYDELWK CCHHHCCCCHHHHHHHHHHEEEECEEEEEECCCEEEEEEECHHHHHHHHHHHHHHHHHHH LDKALFEASIEDYNSASGVEKEAARRNVAYFAVALSLLQPKPEQTEKSREDPEKVTLFDP HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEECC QDIKEYSVEIPPFVKDNVEAELVLIGAQKEEISPIFKYVEDYSQYSPRGHYTSSEKLKNY HHHHHHCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH FKAMMWHGRISMLLQSKMIIAEESMVEELAADSSEKEARIQTIQALLISDHFDRDKNIRD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHH RWDRIYNVTAFYVGFSDDLGPYEYAKALDTVFGNYRSGVSLDNESLAELITELDKYESPK HHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCE IYGGTGEIIPAGSETENETLEATKGFRFMGQRYTPDSYILQKLNPPALNIMDLLGSERAR EECCCCCEEECCCCCCCHHHHHHCCHHHHCCCCCCHHHHHHHCCCCHHHHHHHHCCHHHH EHLRNMGIAESEVYKTRHLSLETEFGAFNEDDWNKNLYWAQLYALKPLFTRYPEGYPTFM HHHHHCCCCHHHHHHHHHEEEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCC QTEAWEDKQLNTALASWTELRHDTILYAKQTYFLGAPQIQEEKPVEGYVEPVPEFYARML CCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCCHHCCHHHHHHHHH ALTKMAHNGLAEMEVLDEQSDKDFTTLENTLEKLLEISIKELEDKELTDAEYKFIRNFGQ HHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC NISPMLENVDIKSQSSILVADVHTGPGGSVLEEGTGKLDLMIVAYKQPDGRIVLGTGPVM CHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHCCCCCEEEEEEEEECCCCEEEEECCCHH SYYEFWQPSGERLTDEEWRKMLNDNPPERPEWVSSFRV HHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHCCC >Mature Secondary Structure MLLTLESGCIDSSNGPINETRPEESIDDQESSFNDIVETAPEKTFSVKNNTLEKQSFFSG CEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHC YYSKENLQFEPAVPAYSLPLKASEIANYDEFTQKIFFTKESKDLLYKNGFVVLDNEDDSE CCCCCCCEECCCCCCEECCCCHHHHCCHHHHHHHHEEECCCCCCEEECCEEEEECCCCCC GPKNQLISGQTLVNETYRSLKVADVPIFITSDSLLHLYHIQFDETLKRVEAEEFYDELWK CCHHHCCCCHHHHHHHHHHEEEECEEEEEECCCEEEEEEECHHHHHHHHHHHHHHHHHHH LDKALFEASIEDYNSASGVEKEAARRNVAYFAVALSLLQPKPEQTEKSREDPEKVTLFDP HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEECC QDIKEYSVEIPPFVKDNVEAELVLIGAQKEEISPIFKYVEDYSQYSPRGHYTSSEKLKNY HHHHHHCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH FKAMMWHGRISMLLQSKMIIAEESMVEELAADSSEKEARIQTIQALLISDHFDRDKNIRD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHH RWDRIYNVTAFYVGFSDDLGPYEYAKALDTVFGNYRSGVSLDNESLAELITELDKYESPK HHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCE IYGGTGEIIPAGSETENETLEATKGFRFMGQRYTPDSYILQKLNPPALNIMDLLGSERAR EECCCCCEEECCCCCCCHHHHHHCCHHHHCCCCCCHHHHHHHCCCCHHHHHHHHCCHHHH EHLRNMGIAESEVYKTRHLSLETEFGAFNEDDWNKNLYWAQLYALKPLFTRYPEGYPTFM HHHHHCCCCHHHHHHHHHEEEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCC QTEAWEDKQLNTALASWTELRHDTILYAKQTYFLGAPQIQEEKPVEGYVEPVPEFYARML CCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCCHHCCHHHHHHHHH ALTKMAHNGLAEMEVLDEQSDKDFTTLENTLEKLLEISIKELEDKELTDAEYKFIRNFGQ HHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC NISPMLENVDIKSQSSILVADVHTGPGGSVLEEGTGKLDLMIVAYKQPDGRIVLGTGPVM CHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHCCCCCEEEEEEEEECCCCEEEEECCCHH SYYEFWQPSGERLTDEEWRKMLNDNPPERPEWVSSFRV HHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA