Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227797

Identifier: 21227797

GI number: 21227797

Start: 2037622

End: 2038263

Strand: Direct

Name: 21227797

Synonym: MM_1695

Alternate gene names: NA

Gene position: 2037622-2038263 (Clockwise)

Preceding gene: 21227796

Following gene: 21227798

Centisome position: 49.74

GC content: 42.52

Gene sequence:

>642_bases
GTGAGAAAATTACTATTTACAATAATAATTATCAGTATATTAGCAATCAGTGTTACTGGCTGTACGGACACGGAAGATGC
ATCATCCATTCCTGCTGATGAAGCAGAGCCCTCCGAGGAGGTATCTTCTGCAGATTCTGCAATCTCCCCTGAAAATGAAA
CTGCTGCCAGCGAGGATGTTATTACTCTGGATAGGGCAAAGGAAATCGCACTTGCTCATGCCGGACTTGAAGAAACTGAT
GTTACCTTTGTTAAATCATGGCTTGAAACCGATGACGGTAGACAGGAATATGAAATCGAGTTTTACCGTGGTAACACAGA
ATATGATTATGATATCGACGCGCTTACTGGAGACATTGTAAGCTATGACTCTGATGCGGAAAACTATTCGAGATCCGATA
GCGCACAGTCAGCCGGCAATAATACTTATATCGGGGAAGAAAAAGCAAAGTCCATAGCACTTGCAAAAGTTTCAGGAGCA
ACGGAGTCTGATATCCGGCTTTATCTGGATTCTGAAGATGGAAAGCCAGTATATGAAGGTTCTATCCTTTTTAACAACAC
AGAATACGAATTTGAAATTGACGCCGTCACCGGAACAGTTCTTCAGTGGAACTATGAACCTGCAGATGACGATGATCGCT
GA

Upstream 100 bases:

>100_bases
GACCTTGATGTTCAAGTCAGATCTAAATAGTAACACCTTTATATTTCTAAGACTAAAATTACCCTTAACACTAAATAAAA
TCACATAAGAGGCATTTACT

Downstream 100 bases:

>100_bases
AAACGAAAAATTTCCAGGTGGAGTTAACTATTTTTTTCGGGCTGAGAACTTTTTATAAAGTTCTCTTTATTCCCTGTTTT
ATACACATGCTCTTTTTATC

Product: hypothetical protein

Products: NA

Alternate protein names: Peptidase Propeptide And YPEB Domain Protein; Lipoprotein

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MRKLLFTIIIISILAISVTGCTDTEDASSIPADEAEPSEEVSSADSAISPENETAASEDVITLDRAKEIALAHAGLEETD
VTFVKSWLETDDGRQEYEIEFYRGNTEYDYDIDALTGDIVSYDSDAENYSRSDSAQSAGNNTYIGEEKAKSIALAKVSGA
TESDIRLYLDSEDGKPVYEGSILFNNTEYEFEIDAVTGTVLQWNYEPADDDDR

Sequences:

>Translated_213_residues
MRKLLFTIIIISILAISVTGCTDTEDASSIPADEAEPSEEVSSADSAISPENETAASEDVITLDRAKEIALAHAGLEETD
VTFVKSWLETDDGRQEYEIEFYRGNTEYDYDIDALTGDIVSYDSDAENYSRSDSAQSAGNNTYIGEEKAKSIALAKVSGA
TESDIRLYLDSEDGKPVYEGSILFNNTEYEFEIDAVTGTVLQWNYEPADDDDR
>Mature_213_residues
MRKLLFTIIIISILAISVTGCTDTEDASSIPADEAEPSEEVSSADSAISPENETAASEDVITLDRAKEIALAHAGLEETD
VTFVKSWLETDDGRQEYEIEFYRGNTEYDYDIDALTGDIVSYDSDAENYSRSDSAQSAGNNTYIGEEKAKSIALAKVSGA
TESDIRLYLDSEDGKPVYEGSILFNNTEYEFEIDAVTGTVLQWNYEPADDDDR

Specific function: Unknown

COG id: COG3212

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23409; Mature: 23409

Theoretical pI: Translated: 3.65; Mature: 3.65

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLLFTIIIISILAISVTGCTDTEDASSIPADEAEPSEEVSSADSAISPENETAASEDV
CHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCE
ITLDRAKEIALAHAGLEETDVTFVKSWLETDDGRQEYEIEFYRGNTEYDYDIDALTGDIV
EEHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCEEHHHHCCCEE
SYDSDAENYSRSDSAQSAGNNTYIGEEKAKSIALAKVSGATESDIRLYLDSEDGKPVYEG
ECCCCCHHCCCCCCHHHCCCCCCCCCHHHHEEEEEEECCCCCCCEEEEEECCCCCEEEEC
SILFNNTEYEFEIDAVTGTVLQWNYEPADDDDR
EEEECCCCEEEEEEEEEEEEEEEECCCCCCCCC
>Mature Secondary Structure
MRKLLFTIIIISILAISVTGCTDTEDASSIPADEAEPSEEVSSADSAISPENETAASEDV
CHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCE
ITLDRAKEIALAHAGLEETDVTFVKSWLETDDGRQEYEIEFYRGNTEYDYDIDALTGDIV
EEHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCEEHHHHCCCEE
SYDSDAENYSRSDSAQSAGNNTYIGEEKAKSIALAKVSGATESDIRLYLDSEDGKPVYEG
ECCCCCHHCCCCCCHHHCCCCCCCCCHHHHEEEEEEECCCCCCCEEEEEECCCCCEEEEC
SILFNNTEYEFEIDAVTGTVLQWNYEPADDDDR
EEEECCCCEEEEEEEEEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA