| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227749
Identifier: 21227749
GI number: 21227749
Start: 1966065
End: 1967450
Strand: Reverse
Name: 21227749
Synonym: MM_1647
Alternate gene names: NA
Gene position: 1967450-1966065 (Counterclockwise)
Preceding gene: 21227750
Following gene: 21227739
Centisome position: 48.03
GC content: 52.67
Gene sequence:
>1386_bases ATGGCAGCAACAAGATTCACTAAGATGGCATACGCAAGCGCAGACGAAATGACCTTCGGCGTATCCAAGTACCCTGTAAA AGCAGGACTAGGCCTTGAAATCGGTGCAGGTTACACAATTCCTGAAGTTAACTACGCCCCAAGACCAGAAGCCGGCGCAT CCAAGGAAAAACTCATAAAAGAATACGAGAGGATCACCACTGACATCATGGCCAGAATGGTCCAGGTCGGTTTCCCGGCA GTTATCCTCGAAACAGAACACGTTCAGCAGATGTCCAACAACCCCTCCTGGGGAGCAGAAGTTGCACACGCCCAGAAGAC CATCATGGAAGAATACCACGATGAATACGGCATAAAGTGCGCACTCCGCCACACAATTGGTGACATCCGTGAGAACAGGG ACTTCCTCCAGCTCAGAGGCGACAAGTACTCCGTCTTCCTCGAAGCATTCGAAGAATGCGCAAAGGCTGGCGCAGACCTC CTGTCTGTTGAATCAATGGGTGGTAAGGAAGTATTCGACTACGCAGTTCTCAGGAACGACATCGCTGGTATGCTCTACGC AATCGGCTGTCTCGGGTCCATTGACATGGAACTCATCTGGTCTGACATCTCCGCAATCGCAAAGAAGACCGGAACTGTTT CTGCTGGTGACACAGACTGTGCCCAGGCAAACACCGCAATGTTCATCGGCGGTGGACTGCTCGACAAGAACCTCGCCCAC ACCCTCGCAATCCTCGCAAGGGCAATTTCCGCACCCAGGTCCCTCGTTGCATACGAGTGTGGCGCTGTTGGTCCAGGAAA GGACTGCGGATACGAGAACGTTGTCATTAAAGCCATTACCGGTATGCCAATGACCCAGGAAGGTAAGACCTCCACCTGCG CTCACTCTGACGTAATGGGTAACCTCATTATGCAGTGCTGTGACTGCTGGTCCAACGAGTCTGTTGAATACCACGGTGAA TTCGGCGGTACAACCGTTCAGTGCTGGGGCGAGTCCCTTGCATATGACTGCGCACTCATGAACACCGCTCTTGAAACCAA GAACGACAAAGTACTCAGGGACCTCCTCATGCTCTCCGACAGGTACAGAGACCCACAGGCCTACGTGCTTGCATACGACA ACGCATACAGGATCGGTCAGGCAATCGTCAAAGACGGAGACAACATCTACCTCAGAGCAAAGAACGCTGCAATCGCATGC TGCGACATCGTCAGCGAAGGTGCTGCAGGCAAGCTCGAGCTCTCCAGGTTCGAGACCAAAGCACTCGCAGACGCAAAGGC ATCCCTGGACTCCCTCACAGACGACATGGACAAGTTCATGGACGACTGCCTCACAAAATACAAGAGCGAAGTTAAAGTCT TCCTCCCTGAGAACTACGGCTTCTAA
Upstream 100 bases:
>100_bases GAGGCCGCTGACGCCCCCAAGATTGCTGACGCAATCGTTGCAGGTACCACAGATATTGCAGCATTAAGAGACAAATTCCA CAAGCACTGAGGTGAGTGAA
Downstream 100 bases:
>100_bases GCCTCCAGTTCTCTTTTTCTTTTTTCTTTAAATTTACTTACTGCACTTTTATCCTCATTTTTTGAAATGAAAAATATAGT GTAGCCTCTATAGCTCCTGC
Product: methanol:corrinoid methyltransferase MtaB
Products: NA
Alternate protein names: MethanolCobalamin Methyltransferase Subunit B; EthanolCobalamin Methyltransferase. MtaB
Number of amino acids: Translated: 461; Mature: 460
Protein sequence:
>461_residues MAATRFTKMAYASADEMTFGVSKYPVKAGLGLEIGAGYTIPEVNYAPRPEAGASKEKLIKEYERITTDIMARMVQVGFPA VILETEHVQQMSNNPSWGAEVAHAQKTIMEEYHDEYGIKCALRHTIGDIRENRDFLQLRGDKYSVFLEAFEECAKAGADL LSVESMGGKEVFDYAVLRNDIAGMLYAIGCLGSIDMELIWSDISAIAKKTGTVSAGDTDCAQANTAMFIGGGLLDKNLAH TLAILARAISAPRSLVAYECGAVGPGKDCGYENVVIKAITGMPMTQEGKTSTCAHSDVMGNLIMQCCDCWSNESVEYHGE FGGTTVQCWGESLAYDCALMNTALETKNDKVLRDLLMLSDRYRDPQAYVLAYDNAYRIGQAIVKDGDNIYLRAKNAAIAC CDIVSEGAAGKLELSRFETKALADAKASLDSLTDDMDKFMDDCLTKYKSEVKVFLPENYGF
Sequences:
>Translated_461_residues MAATRFTKMAYASADEMTFGVSKYPVKAGLGLEIGAGYTIPEVNYAPRPEAGASKEKLIKEYERITTDIMARMVQVGFPA VILETEHVQQMSNNPSWGAEVAHAQKTIMEEYHDEYGIKCALRHTIGDIRENRDFLQLRGDKYSVFLEAFEECAKAGADL LSVESMGGKEVFDYAVLRNDIAGMLYAIGCLGSIDMELIWSDISAIAKKTGTVSAGDTDCAQANTAMFIGGGLLDKNLAH TLAILARAISAPRSLVAYECGAVGPGKDCGYENVVIKAITGMPMTQEGKTSTCAHSDVMGNLIMQCCDCWSNESVEYHGE FGGTTVQCWGESLAYDCALMNTALETKNDKVLRDLLMLSDRYRDPQAYVLAYDNAYRIGQAIVKDGDNIYLRAKNAAIAC CDIVSEGAAGKLELSRFETKALADAKASLDSLTDDMDKFMDDCLTKYKSEVKVFLPENYGF >Mature_460_residues AATRFTKMAYASADEMTFGVSKYPVKAGLGLEIGAGYTIPEVNYAPRPEAGASKEKLIKEYERITTDIMARMVQVGFPAV ILETEHVQQMSNNPSWGAEVAHAQKTIMEEYHDEYGIKCALRHTIGDIRENRDFLQLRGDKYSVFLEAFEECAKAGADLL SVESMGGKEVFDYAVLRNDIAGMLYAIGCLGSIDMELIWSDISAIAKKTGTVSAGDTDCAQANTAMFIGGGLLDKNLAHT LAILARAISAPRSLVAYECGAVGPGKDCGYENVVIKAITGMPMTQEGKTSTCAHSDVMGNLIMQCCDCWSNESVEYHGEF GGTTVQCWGESLAYDCALMNTALETKNDKVLRDLLMLSDRYRDPQAYVLAYDNAYRIGQAIVKDGDNIYLRAKNAAIACC DIVSEGAAGKLELSRFETKALADAKASLDSLTDDMDKFMDDCLTKYKSEVKVFLPENYGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50311; Mature: 50180
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAATRFTKMAYASADEMTFGVSKYPVKAGLGLEIGAGYTIPEVNYAPRPEAGASKEKLIK CCCCHHHHHHHCCCCCCEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHH EYERITTDIMARMVQVGFPAVILETEHVQQMSNNPSWGAEVAHAQKTIMEEYHDEYGIKC HHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCEE ALRHTIGDIRENRDFLQLRGDKYSVFLEAFEECAKAGADLLSVESMGGKEVFDYAVLRND EHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCCCEEEHHCCCCHHHHHHHHHHHH IAGMLYAIGCLGSIDMELIWSDISAIAKKTGTVSAGDTDCAQANTAMFIGGGLLDKNLAH HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCEEEEECCHHHHHHHH TLAILARAISAPRSLVAYECGAVGPGKDCGYENVVIKAITGMPMTQEGKTSTCAHSDVMG HHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHH NLIMQCCDCWSNESVEYHGEFGGTTVQCWGESLAYDCALMNTALETKNDKVLRDLLMLSD HHHHHHHHCCCCCCEEEECCCCCCEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH RYRDPQAYVLAYDNAYRIGQAIVKDGDNIYLRAKNAAIACCDIVSEGAAGKLELSRFETK CCCCCCEEEEEECCHHHHHHHHHHCCCEEEEEECCCEEEEHHHHCCCCCCCEEHHHHHHH ALADAKASLDSLTDDMDKFMDDCLTKYKSEVKVFLPENYGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCC >Mature Secondary Structure AATRFTKMAYASADEMTFGVSKYPVKAGLGLEIGAGYTIPEVNYAPRPEAGASKEKLIK CCCHHHHHHHCCCCCCEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHH EYERITTDIMARMVQVGFPAVILETEHVQQMSNNPSWGAEVAHAQKTIMEEYHDEYGIKC HHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCEE ALRHTIGDIRENRDFLQLRGDKYSVFLEAFEECAKAGADLLSVESMGGKEVFDYAVLRND EHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCCCEEEHHCCCCHHHHHHHHHHHH IAGMLYAIGCLGSIDMELIWSDISAIAKKTGTVSAGDTDCAQANTAMFIGGGLLDKNLAH HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCEEEEECCHHHHHHHH TLAILARAISAPRSLVAYECGAVGPGKDCGYENVVIKAITGMPMTQEGKTSTCAHSDVMG HHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHH NLIMQCCDCWSNESVEYHGEFGGTTVQCWGESLAYDCALMNTALETKNDKVLRDLLMLSD HHHHHHHHCCCCCCEEEECCCCCCEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH RYRDPQAYVLAYDNAYRIGQAIVKDGDNIYLRAKNAAIACCDIVSEGAAGKLELSRFETK CCCCCCEEEEEECCHHHHHHHHHHCCCEEEEEECCCEEEEHHHHCCCCCCCEEHHHHHHH ALADAKASLDSLTDDMDKFMDDCLTKYKSEVKVFLPENYGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA