Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227739

Identifier: 21227739

GI number: 21227739

Start: 1952060

End: 1952644

Strand: Reverse

Name: 21227739

Synonym: MM_1637

Alternate gene names: NA

Gene position: 1952644-1952060 (Counterclockwise)

Preceding gene: 21227749

Following gene: 21227738

Centisome position: 47.67

GC content: 38.46

Gene sequence:

>585_bases
ATGCCCTATCCAGTTGTGCACATTTTGTTCTTTGTATTCTGTGTCAGTGCAGTAGCTGTTTATGCTACTTTCAGATCAAT
TTCTCAAAGGCAGGCTACTTTTGGGAGTTCATTGAATTTACTCCTGTTATTACTGGTGGGCAGTGTATGTACGCTACTTC
CAGACGTCATGATCATTTATAATTTGTTCGTAAACGGCACCATTGAATATTGCTGGATTGGATCTATCCCGACACACTCA
CTTCTATTCAGTTTTTCTGCTATCGTATTGGGAACATTTGCAGGATATGTTGTATACCAGAAAGTTGCTAAAGCAATATA
TCTAGGCCTTTTTGGCGAGGTCGCGTTCTCTACTCATCTCTTGCTTGATGATGCCTGCGGAGCCAGTTGTTACTACTTCT
ACCCAGTATACAGCGAAAGAATTAGCATATTCCCATTTATGAACATAAGCTTCCTGGAGACCGGAGTTTTAAATTATCTG
ATAATATCTTTTGTATCCGTTTCTTTTCTTTGCCTCTTAATAATGATGGCATTGTATTCCTTGCATCATTTTGGCTTTGA
GTTCAAATATGAGTTTAAAGGATAA

Upstream 100 bases:

>100_bases
TTAAGCACGGCATATTGAACAGATGAAAAAATAATCAGAACATAAAGTAAAAAACGGGTTGTCAACCAAAAACAAGTTAG
ATTTAAAGGAGTAGCTTTTC

Downstream 100 bases:

>100_bases
ATAAGTCTGAAGTGTTTGCTATGCTTATTTTGCAGAAAAAGAAATATTATCAAATAGCAGTTAAAATAACCACACTAATA
GGCTAAAGGGCATGCAATCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MPYPVVHILFFVFCVSAVAVYATFRSISQRQATFGSSLNLLLLLLVGSVCTLLPDVMIIYNLFVNGTIEYCWIGSIPTHS
LLFSFSAIVLGTFAGYVVYQKVAKAIYLGLFGEVAFSTHLLLDDACGASCYYFYPVYSERISIFPFMNISFLETGVLNYL
IISFVSVSFLCLLIMMALYSLHHFGFEFKYEFKG

Sequences:

>Translated_194_residues
MPYPVVHILFFVFCVSAVAVYATFRSISQRQATFGSSLNLLLLLLVGSVCTLLPDVMIIYNLFVNGTIEYCWIGSIPTHS
LLFSFSAIVLGTFAGYVVYQKVAKAIYLGLFGEVAFSTHLLLDDACGASCYYFYPVYSERISIFPFMNISFLETGVLNYL
IISFVSVSFLCLLIMMALYSLHHFGFEFKYEFKG
>Mature_193_residues
PYPVVHILFFVFCVSAVAVYATFRSISQRQATFGSSLNLLLLLLVGSVCTLLPDVMIIYNLFVNGTIEYCWIGSIPTHSL
LFSFSAIVLGTFAGYVVYQKVAKAIYLGLFGEVAFSTHLLLDDACGASCYYFYPVYSERISIFPFMNISFLETGVLNYLI
ISFVSVSFLCLLIMMALYSLHHFGFEFKYEFKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21816; Mature: 21685

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYPVVHILFFVFCVSAVAVYATFRSISQRQATFGSSLNLLLLLLVGSVCTLLPDVMIIY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
NLFVNGTIEYCWIGSIPTHSLLFSFSAIVLGTFAGYVVYQKVAKAIYLGLFGEVAFSTHL
HHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLDDACGASCYYFYPVYSERISIFPFMNISFLETGVLNYLIISFVSVSFLCLLIMMALYS
HHHCCCCCCEEEEEEEHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHHFGFEFKYEFKG
HHHCCCEEEEEECC
>Mature Secondary Structure 
PYPVVHILFFVFCVSAVAVYATFRSISQRQATFGSSLNLLLLLLVGSVCTLLPDVMIIY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
NLFVNGTIEYCWIGSIPTHSLLFSFSAIVLGTFAGYVVYQKVAKAIYLGLFGEVAFSTHL
HHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLDDACGASCYYFYPVYSERISIFPFMNISFLETGVLNYLIISFVSVSFLCLLIMMALYS
HHHCCCCCCEEEEEEEHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHHFGFEFKYEFKG
HHHCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA