Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227738

Identifier: 21227738

GI number: 21227738

Start: 1950408

End: 1951547

Strand: Reverse

Name: 21227738

Synonym: MM_1636

Alternate gene names: NA

Gene position: 1951547-1950408 (Counterclockwise)

Preceding gene: 21227739

Following gene: 21227730

Centisome position: 47.64

GC content: 43.6

Gene sequence:

>1140_bases
GTGAAAATAATGATATTCATATGCGGAGAAGGGCTTGGCCACACCAGCCGCTGTCTTGCGCTGGGAAAGGAGCTTCTTGC
TGCAGGGCACGAGATCGAATTCGGGGCTTACGGTTACTCCAGAGATCTGGTTGAAAAGACAGGTTATCGGATACATGAAA
TACCATCGGAGATAAAACTGGTTGGAAAAGCTGGAGGATTTGACCTTTCGGGCTCAATAGAAGCGACCCTCAAAAATGCC
CGGATACTTGGTGGTCCAAAGGTCCTGAAACTTATAAAAGACTTCAAACCGGATGTTGTGGTTTCGGACAGCTATTACCT
GGGAACTCTTGCAGCTATGCTTCTTAATATCCCTGTGTATCTTATTATTAACCAGTCAAATATGGAGGACTTTTTCAAAA
ACAGGGGCGTTCCTATAAGACTTCTCGGAGATCTGACAAAAAAATTCTACCGGGAAGTCTTTGAAAAAACCGATAAAATA
ATTATTCCTGATTATCCCCTTCCATATACGGTTTGCAGAAAAAATCTGAATTTTTCCCCCGGACTTTGGGAAAAGCTGTA
TTACAGCGGCCCTCTTGTAAAGGAAAAGTATGAAGAAGTGGAACAGATCCCTCTGAAAAAGCCTCATATTGTTTCCCTGA
TAGGAGGTTTCGGATACAGGGAACCGATTTTCAGAAAAGTGCTCACAACTGCTGCACTCGACTCCGGAATAAATTATACG
CTAATTTCTGGCCCAAGCCTCGACCCCTCAAAGTTCAAAGAAATCCCCAAAAACGTTCAGATCCTCAGGTTTGTAGGAGA
TACTTTTCCATATATCAGGAGTTCAGATGCCGTAATAGCTCCAGGCGGACACAGTACAATGATGGAAGCTTTAAGTTTTG
GAACTCCAATTCTTTCTTTTCCTGATGAGGGACACAGCGAACAGGAGAACAACGCTGCAGTGATTGAAGAGGAAGGTTAT
GGAAGAATGCTCAGTTATTCTACCCCGCCTGAAGTCATTCTGGAATGTATAAGGGAAGTTCTTGAAGACAAGAAATACAG
AGATAAAGTAAAAAGATTGCAGCGGCTTGCATCCGAACTTGACGGCCCAAAAGCAGTCAGGGAACTGCTGGAAAAAGAAG
CCGGGAAAAAAGTCTCCTGA

Upstream 100 bases:

>100_bases
TTGATAAAAAATGCATATAATACATATTATGTATATTACAGGGTAAAATTCAGAAAAAAGAGAACCAGGGAAGTATATTC
GAGAAATGGAGGGAGCCAGG

Downstream 100 bases:

>100_bases
AAAATCCTTTACCCCTCTCTCGATGCCTGCATAAAGCCTTAGCCGGTTAAACAGGCCTGAGTGAGGGTTATCAGGAAAAA
AACGGGTTCTTTATGTTTGC

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MKIMIFICGEGLGHTSRCLALGKELLAAGHEIEFGAYGYSRDLVEKTGYRIHEIPSEIKLVGKAGGFDLSGSIEATLKNA
RILGGPKVLKLIKDFKPDVVVSDSYYLGTLAAMLLNIPVYLIINQSNMEDFFKNRGVPIRLLGDLTKKFYREVFEKTDKI
IIPDYPLPYTVCRKNLNFSPGLWEKLYYSGPLVKEKYEEVEQIPLKKPHIVSLIGGFGYREPIFRKVLTTAALDSGINYT
LISGPSLDPSKFKEIPKNVQILRFVGDTFPYIRSSDAVIAPGGHSTMMEALSFGTPILSFPDEGHSEQENNAAVIEEEGY
GRMLSYSTPPEVILECIREVLEDKKYRDKVKRLQRLASELDGPKAVRELLEKEAGKKVS

Sequences:

>Translated_379_residues
MKIMIFICGEGLGHTSRCLALGKELLAAGHEIEFGAYGYSRDLVEKTGYRIHEIPSEIKLVGKAGGFDLSGSIEATLKNA
RILGGPKVLKLIKDFKPDVVVSDSYYLGTLAAMLLNIPVYLIINQSNMEDFFKNRGVPIRLLGDLTKKFYREVFEKTDKI
IIPDYPLPYTVCRKNLNFSPGLWEKLYYSGPLVKEKYEEVEQIPLKKPHIVSLIGGFGYREPIFRKVLTTAALDSGINYT
LISGPSLDPSKFKEIPKNVQILRFVGDTFPYIRSSDAVIAPGGHSTMMEALSFGTPILSFPDEGHSEQENNAAVIEEEGY
GRMLSYSTPPEVILECIREVLEDKKYRDKVKRLQRLASELDGPKAVRELLEKEAGKKVS
>Mature_379_residues
MKIMIFICGEGLGHTSRCLALGKELLAAGHEIEFGAYGYSRDLVEKTGYRIHEIPSEIKLVGKAGGFDLSGSIEATLKNA
RILGGPKVLKLIKDFKPDVVVSDSYYLGTLAAMLLNIPVYLIINQSNMEDFFKNRGVPIRLLGDLTKKFYREVFEKTDKI
IIPDYPLPYTVCRKNLNFSPGLWEKLYYSGPLVKEKYEEVEQIPLKKPHIVSLIGGFGYREPIFRKVLTTAALDSGINYT
LISGPSLDPSKFKEIPKNVQILRFVGDTFPYIRSSDAVIAPGGHSTMMEALSFGTPILSFPDEGHSEQENNAAVIEEEGY
GRMLSYSTPPEVILECIREVLEDKKYRDKVKRLQRLASELDGPKAVRELLEKEAGKKVS

Specific function: Unknown

COG id: COG1819

COG function: function code GC; Glycosyl transferases, related to UDP-glucuronosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 28 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1636_METMA (Q8PWF3)

Other databases:

- EMBL:   AE008384
- RefSeq:   NP_633660.1
- ProteinModelPortal:   Q8PWF3
- GeneID:   1479978
- GenomeReviews:   AE008384_GR
- KEGG:   mma:MM_1636
- NMPDR:   fig|192952.1.peg.1636
- HOGENOM:   HBG541230
- OMA:   ISDCKYS
- ProtClustDB:   CLSK876508
- BioCyc:   MMAZ192952:MM1636-MONOMER
- InterPro:   IPR004276
- InterPro:   IPR007235
- InterPro:   IPR002213
- PANTHER:   PTHR11926

Pfam domain/function: PF04101 Glyco_tran_28_C; PF03033 Glyco_transf_28

EC number: NA

Molecular weight: Translated: 42405; Mature: 42405

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIMIFICGEGLGHTSRCLALGKELLAAGHEIEFGAYGYSRDLVEKTGYRIHEIPSEIKL
CEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHCCCEEECCCHHHEE
VGKAGGFDLSGSIEATLKNARILGGPKVLKLIKDFKPDVVVSDSYYLGTLAAMLLNIPVY
EECCCCCCCCCCHHHHHHCCEECCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCEE
LIINQSNMEDFFKNRGVPIRLLGDLTKKFYREVFEKTDKIIIPDYPLPYTVCRKNLNFSP
EEEECCCHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHCCCCCCC
GLWEKLYYSGPLVKEKYEEVEQIPLKKPHIVSLIGGFGYREPIFRKVLTTAALDSGINYT
CHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEE
LISGPSLDPSKFKEIPKNVQILRFVGDTFPYIRSSDAVIAPGGHSTMMEALSFGTPILSF
EEECCCCCHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCEEC
PDEGHSEQENNAAVIEEEGYGRMLSYSTPPEVILECIREVLEDKKYRDKVKRLQRLASEL
CCCCCCCCCCCCEEEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DGPKAVRELLEKEAGKKVS
CCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKIMIFICGEGLGHTSRCLALGKELLAAGHEIEFGAYGYSRDLVEKTGYRIHEIPSEIKL
CEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHCCCEEECCCHHHEE
VGKAGGFDLSGSIEATLKNARILGGPKVLKLIKDFKPDVVVSDSYYLGTLAAMLLNIPVY
EECCCCCCCCCCHHHHHHCCEECCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCEE
LIINQSNMEDFFKNRGVPIRLLGDLTKKFYREVFEKTDKIIIPDYPLPYTVCRKNLNFSP
EEEECCCHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHCCCCCCC
GLWEKLYYSGPLVKEKYEEVEQIPLKKPHIVSLIGGFGYREPIFRKVLTTAALDSGINYT
CHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEE
LISGPSLDPSKFKEIPKNVQILRFVGDTFPYIRSSDAVIAPGGHSTMMEALSFGTPILSF
EEECCCCCHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCEEC
PDEGHSEQENNAAVIEEEGYGRMLSYSTPPEVILECIREVLEDKKYRDKVKRLQRLASEL
CCCCCCCCCCCCEEEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DGPKAVRELLEKEAGKKVS
CCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12125824